RNA–Protein interactions for RNA: ENST00000640227.1

CNTN2-229, Transcript of contactin 2, humanhuman

TSL 5

Gene CNTN2, Length 2,610 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN2-229ENST00000640227 PHLDB1Q86UU1 1377 aa17.35■□□□□ 0.37
CNTN2-229ENST00000640227 FGD5Q6ZNL6 1462 aa17.34■□□□□ 0.37
CNTN2-229ENST00000640227 SIN3AQ96ST3 1273 aa17.34■□□□□ 0.37
CNTN2-229ENST00000640227 LRRC9Q6ZRR7 1453 aa17.33■□□□□ 0.37
CNTN2-229ENST00000640227 NESP48681 1621 aa17.33■□□□□ 0.36
CNTN2-229ENST00000640227 SETD5Q9C0A6 1442 aa17.33■□□□□ 0.36
CNTN2-229ENST00000640227 PRDM2Q13029 1718 aa17.32■□□□□ 0.36
CNTN2-229ENST00000640227 MYT1Q01538 1121 aa17.31■□□□□ 0.36
CNTN2-229ENST00000640227 CADPSQ9ULU8 1353 aa17.3■□□□□ 0.36
CNTN2-229ENST00000640227 MAP3K1Q13233 1512 aa17.28■□□□□ 0.36
CNTN2-229ENST00000640227 DDX10Q13206 875 aaKnown RBP17.27■□□□□ 0.36
CNTN2-229ENST00000640227 WDR97A6NE52 1622 aa17.27■□□□□ 0.36
CNTN2-229ENST00000640227 PCF11O94913 1555 aaKnown RBP17.26■□□□□ 0.35
CNTN2-229ENST00000640227 HIRIP3Q9BW71 556 aaPredicted RBP17.25■□□□□ 0.35
CNTN2-229ENST00000640227 FHOD3Q2V2M9 1422 aa17.24■□□□□ 0.35
CNTN2-229ENST00000640227 FHAD1B1AJZ9 1412 aa17.23■□□□□ 0.35
CNTN2-229ENST00000640227 CFAP43Q8NDM7 1665 aa17.2■□□□□ 0.34
CNTN2-229ENST00000640227 RAD54L2Q9Y4B4 1467 aa17.19■□□□□ 0.34
CNTN2-229ENST00000640227 BCANQ96GW7 911 aa17.17■□□□□ 0.34
CNTN2-229ENST00000640227 FANCD2Q9BXW9 1451 aa17.16■□□□□ 0.34
CNTN2-229ENST00000640227 TSHZ2Q9NRE2 1034 aa17.16■□□□□ 0.34
CNTN2-229ENST00000640227 PPP1R15AO75807 674 aaPredicted RBP17.14■□□□□ 0.33
CNTN2-229ENST00000640227 FYCO1Q9BQS8 1478 aa17.11■□□□□ 0.33
CNTN2-229ENST00000640227 FKBP8Q14318 412 aa17.1■□□□□ 0.33
CNTN2-229ENST00000640227 CASKIN1Q8WXD9 1431 aa17.1■□□□□ 0.33
CNTN2-229ENST00000640227 POLA1P09884 1462 aaPredicted RBP17.09■□□□□ 0.33
CNTN2-229ENST00000640227 ABCA10Q8WWZ4 1543 aa17.07■□□□□ 0.32
CNTN2-229ENST00000640227 TRIM52Q96A61 297 aa17.07■□□□□ 0.32
CNTN2-229ENST00000640227 TIMELESSQ9UNS1 1208 aa17.07■□□□□ 0.32
CNTN2-229ENST00000640227 DNMBPQ6XZF7 1577 aa17.06■□□□□ 0.32
CNTN2-229ENST00000640227 TOPBP1Q92547 1522 aa17.06■□□□□ 0.32
CNTN2-229ENST00000640227 EFCAB5A4FU69 1503 aa17.06■□□□□ 0.32
CNTN2-229ENST00000640227 FGD6Q6ZV73 1430 aa17.05■□□□□ 0.32
CNTN2-229ENST00000640227 ANP32CO43423 234 aa17.04■□□□□ 0.32
CNTN2-229ENST00000640227 TONSLQ96HA7 1378 aa17.03■□□□□ 0.32
CNTN2-229ENST00000640227 PTPRKQ15262 1439 aa17.03■□□□□ 0.32
CNTN2-229ENST00000640227 MTUS2Q5JR59 1369 aa17.03■□□□□ 0.32
CNTN2-229ENST00000640227 AQRO60306 1485 aaKnown RBP eCLIP17.03■□□□□ 0.32
CNTN2-229ENST00000640227 CCDC18Q5T9S5 1454 aa17.03■□□□□ 0.32
CNTN2-229ENST00000640227 CTTNBP2Q8WZ74 1663 aa17.02■□□□□ 0.32
CNTN2-229ENST00000640227 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.02■□□□□ 0.32
CNTN2-229ENST00000640227 FMN1Q68DA7 1419 aa17.01■□□□□ 0.31
CNTN2-229ENST00000640227 SNAPC4Q5SXM2 1469 aa17■□□□□ 0.31
CNTN2-229ENST00000640227 CUL7Q14999 1698 aa17■□□□□ 0.31
CNTN2-229ENST00000640227 CCER2I3L3R5 266 aa16.98■□□□□ 0.31
CNTN2-229ENST00000640227 TDRD9Q8NDG6 1382 aaKnown RBP16.98■□□□□ 0.31
CNTN2-229ENST00000640227 HFM1A2PYH4 1435 aa16.96■□□□□ 0.31
CNTN2-229ENST00000640227 PTPN23Q9H3S7 1636 aa16.96■□□□□ 0.3
CNTN2-229ENST00000640227 UACAQ9BZF9 1416 aa16.95■□□□□ 0.3
CNTN2-229ENST00000640227 LRRIQ1Q96JM4 1722 aa16.95■□□□□ 0.3
CNTN2-229ENST00000640227 NEFLP07196 543 aa16.95■□□□□ 0.3
CNTN2-229ENST00000640227 URB2Q14146 1524 aaKnown RBP16.94■□□□□ 0.3
CNTN2-229ENST00000640227 NCOA2Q15596 1464 aa16.94■□□□□ 0.3
CNTN2-229ENST00000640227 KIF21AQ7Z4S6 1674 aa16.93■□□□□ 0.3
CNTN2-229ENST00000640227 NAIPQ13075 1403 aa16.93■□□□□ 0.3
CNTN2-229ENST00000640227 RRP7BPQ9NSQ0 103 aa16.91■□□□□ 0.3
CNTN2-229ENST00000640227 CHIC2Q9UKJ5 165 aa16.91■□□□□ 0.3
CNTN2-229ENST00000640227 MYOM3Q5VTT5 1437 aa16.91■□□□□ 0.3
CNTN2-229ENST00000640227 LAMC3Q9Y6N6 1575 aa16.9■□□□□ 0.3
CNTN2-229ENST00000640227 GRIN2BQ13224 1484 aa16.89■□□□□ 0.29
CNTN2-229ENST00000640227 SAMD9Q5K651 1589 aa16.88■□□□□ 0.29
CNTN2-229ENST00000640227 ANP32EQ9BTT0 268 aa16.87■□□□□ 0.29
CNTN2-229ENST00000640227 GAPVD1Q14C86 1478 aa16.86■□□□□ 0.29
CNTN2-229ENST00000640227 PDS5BQ9NTI5 1447 aa16.86■□□□□ 0.29
CNTN2-229ENST00000640227 SUPT6HQ7KZ85 1726 aaKnown RBP16.86■□□□□ 0.29
CNTN2-229ENST00000640227 KDM5BQ9UGL1 1544 aa16.85■□□□□ 0.29
CNTN2-229ENST00000640227 ARID3CA6NKF2 412 aa16.84■□□□□ 0.29
CNTN2-229ENST00000640227 ABCA5Q8WWZ7 1642 aa16.84■□□□□ 0.29
CNTN2-229ENST00000640227 MAGI3Q5TCQ9 1506 aa16.84■□□□□ 0.29
CNTN2-229ENST00000640227 HNRNPUQ00839 825 aaKnown RBP eCLIP16.83■□□□□ 0.28
CNTN2-229ENST00000640227 EHBP1L1Q8N3D4 1523 aa16.82■□□□□ 0.28
CNTN2-229ENST00000640227 HSPA5P11021 654 aaKnown RBP16.82■□□□□ 0.28
CNTN2-229ENST00000640227 RBM19Q9Y4C8 960 aaKnown RBP16.82■□□□□ 0.28
CNTN2-229ENST00000640227 UGGT2Q9NYU1 1516 aa16.81■□□□□ 0.28
CNTN2-229ENST00000640227 WASHC2AQ641Q2 1341 aa16.81■□□□□ 0.28
CNTN2-229ENST00000640227 IRX6P78412 446 aaPredicted RBP16.81■□□□□ 0.28
CNTN2-229ENST00000640227 FOXD1Q16676 465 aa16.8■□□□□ 0.28
CNTN2-229ENST00000640227 DENND4BO75064 1496 aaPredicted RBP16.79■□□□□ 0.28
CNTN2-229ENST00000640227 KDM6BO15054 1643 aa16.78■□□□□ 0.28
CNTN2-229ENST00000640227 THOC2Q8NI27 1593 aaKnown RBP16.78■□□□□ 0.28
CNTN2-229ENST00000640227 ARHGEF11O15085 1522 aa16.76■□□□□ 0.27
CNTN2-229ENST00000640227 CCDC184Q52MB2 194 aa16.74■□□□□ 0.27
CNTN2-229ENST00000640227 MPHOSPH9Q99550 1183 aa16.74■□□□□ 0.27
CNTN2-229ENST00000640227 EIF4G2P78344 907 aaKnown RBP eCLIP16.73■□□□□ 0.27
CNTN2-229ENST00000640227 L3MBTL2Q969R5 705 aa16.73■□□□□ 0.27
CNTN2-229ENST00000640227 CDK13Q14004 1512 aaKnown RBP16.73■□□□□ 0.27
CNTN2-229ENST00000640227 GCC2Q8IWJ2 1684 aa16.72■□□□□ 0.27
CNTN2-229ENST00000640227 TCOF1Q13428 1488 aaKnown RBP16.72■□□□□ 0.27
CNTN2-229ENST00000640227 HECW1Q76N89 1606 aa16.72■□□□□ 0.27
CNTN2-229ENST00000640227 C11orf95C9JLR9 678 aaPredicted RBP16.71■□□□□ 0.27
CNTN2-229ENST00000640227 EPRSP07814 1512 aaKnown RBP16.7■□□□□ 0.26
CNTN2-229ENST00000640227 TARBP1Q13395 1621 aaKnown RBP16.67■□□□□ 0.26
CNTN2-229ENST00000640227 CNTLNQ9NXG0 1405 aa16.67■□□□□ 0.26
CNTN2-229ENST00000640227 FAM9BQ8IZU0 186 aa16.66■□□□□ 0.26
CNTN2-229ENST00000640227 ERCC6Q03468 1493 aa16.66■□□□□ 0.26
CNTN2-229ENST00000640227 NBPF8Q3BBV2 869 aa16.65■□□□□ 0.26
CNTN2-229ENST00000640227 IQGAP2Q13576 1575 aa16.65■□□□□ 0.26
CNTN2-229ENST00000640227 ZNF608Q9ULD9 1512 aaPredicted RBP16.65■□□□□ 0.26
CNTN2-229ENST00000640227 AKNAQ7Z591 1439 aa16.64■□□□□ 0.25
CNTN2-229ENST00000640227 ZNF644Q9H582 1327 aaPredicted RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms