RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 WDR97A6NE52 1622 aa28.73■■■□□ 2.19
CACNA1A-243ENST00000637616 P3H3Q8IVL6 736 aa28.69■■■□□ 2.18
CACNA1A-243ENST00000637616 SETD5Q9C0A6 1442 aa28.69■■■□□ 2.18
CACNA1A-243ENST00000637616 PPP1R15AO75807 674 aaPredicted RBP28.66■■■□□ 2.18
CACNA1A-243ENST00000637616 PHLDB1Q86UU1 1377 aa28.64■■■□□ 2.18
CACNA1A-243ENST00000637616 NEFLP07196 543 aa28.62■■■□□ 2.17
CACNA1A-243ENST00000637616 RBM19Q9Y4C8 960 aaKnown RBP28.61■■■□□ 2.17
CACNA1A-243ENST00000637616 ANP32CO43423 234 aa28.54■■■□□ 2.16
CACNA1A-243ENST00000637616 IGF1RP08069 1367 aa28.54■■■□□ 2.16
CACNA1A-243ENST00000637616 TIAM1Q13009 1591 aa28.53■■■□□ 2.16
CACNA1A-243ENST00000637616 LRRC9Q6ZRR7 1453 aa28.51■■■□□ 2.15
CACNA1A-243ENST00000637616 BCL11AQ9H165 835 aa28.48■■■□□ 2.15
CACNA1A-243ENST00000637616 CARMIL1Q5VZK9 1371 aa28.43■■■□□ 2.14
CACNA1A-243ENST00000637616 IRX6P78412 446 aaPredicted RBP28.43■■■□□ 2.14
CACNA1A-243ENST00000637616 CCER2I3L3R5 266 aa28.42■■■□□ 2.14
CACNA1A-243ENST00000637616 CFTRP13569 1480 aa28.39■■■□□ 2.14
CACNA1A-243ENST00000637616 NCAPD3P42695 1498 aa28.36■■■□□ 2.13
CACNA1A-243ENST00000637616 TIMELESSQ9UNS1 1208 aa28.33■■■□□ 2.13
CACNA1A-243ENST00000637616 MSH5O43196 834 aa28.32■■■□□ 2.12
CACNA1A-243ENST00000637616 MAP3K1Q13233 1512 aa28.32■■■□□ 2.12
CACNA1A-243ENST00000637616 TONSLQ96HA7 1378 aa28.31■■■□□ 2.12
CACNA1A-243ENST00000637616 HNRNPUQ00839 825 aaKnown RBP eCLIP28.29■■■□□ 2.12
CACNA1A-243ENST00000637616 FHOD3Q2V2M9 1422 aa28.29■■■□□ 2.12
CACNA1A-243ENST00000637616 HMGXB3Q12766 1538 aa28.27■■■□□ 2.12
CACNA1A-243ENST00000637616 PCF11O94913 1555 aaKnown RBP28.26■■■□□ 2.11
CACNA1A-243ENST00000637616 FHAD1B1AJZ9 1412 aa28.25■■■□□ 2.11
CACNA1A-243ENST00000637616 FGD5Q6ZNL6 1462 aa28.2■■■□□ 2.1
CACNA1A-243ENST00000637616 PTPRKQ15262 1439 aa28.12■■■□□ 2.09
CACNA1A-243ENST00000637616 CFAP43Q8NDM7 1665 aa28.11■■■□□ 2.09
CACNA1A-243ENST00000637616 CCDC18Q5T9S5 1454 aa28.1■■■□□ 2.09
CACNA1A-243ENST00000637616 CDK11AQ9UQ88 783 aaPredicted RBP28.1■■■□□ 2.09
CACNA1A-243ENST00000637616 CCDC184Q52MB2 194 aa28.07■■■□□ 2.08
CACNA1A-243ENST00000637616 FGD6Q6ZV73 1430 aa28.07■■■□□ 2.08
CACNA1A-243ENST00000637616 CADPSQ9ULU8 1353 aa28.04■■■□□ 2.08
CACNA1A-243ENST00000637616 WASHC2AQ641Q2 1341 aa28.03■■■□□ 2.08
CACNA1A-243ENST00000637616 HSPA5P11021 654 aaKnown RBP28.03■■■□□ 2.08
CACNA1A-243ENST00000637616 AQRO60306 1485 aaKnown RBP eCLIP28.02■■■□□ 2.08
CACNA1A-243ENST00000637616 MTUS2Q5JR59 1369 aa28.02■■■□□ 2.08
CACNA1A-243ENST00000637616 CHIC2Q9UKJ5 165 aa28.02■■■□□ 2.08
CACNA1A-243ENST00000637616 RAD54L2Q9Y4B4 1467 aa28.01■■■□□ 2.07
CACNA1A-243ENST00000637616 CASKIN1Q8WXD9 1431 aa28.01■■■□□ 2.07
CACNA1A-243ENST00000637616 ERICH6Q7L0X2 663 aa28■■■□□ 2.07
CACNA1A-243ENST00000637616 RRP7BPQ9NSQ0 103 aa28■■■□□ 2.07
CACNA1A-243ENST00000637616 UACAQ9BZF9 1416 aa28■■■□□ 2.07
CACNA1A-243ENST00000637616 FYCO1Q9BQS8 1478 aa28■■■□□ 2.07
CACNA1A-243ENST00000637616 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.97■■■□□ 2.07
CACNA1A-243ENST00000637616 FAM9BQ8IZU0 186 aa27.97■■■□□ 2.07
CACNA1A-243ENST00000637616 HFM1A2PYH4 1435 aa27.95■■■□□ 2.07
CACNA1A-243ENST00000637616 FANCIQ9NVI1 1328 aa27.95■■■□□ 2.06
CACNA1A-243ENST00000637616 NAIPQ13075 1403 aa27.93■■■□□ 2.06
CACNA1A-243ENST00000637616 B4GALNT3Q6L9W6 998 aa27.92■■■□□ 2.06
CACNA1A-243ENST00000637616 PTPN23Q9H3S7 1636 aa27.9■■■□□ 2.06
CACNA1A-243ENST00000637616 FOXD1Q16676 465 aa27.89■■■□□ 2.06
CACNA1A-243ENST00000637616 C11orf95C9JLR9 678 aaPredicted RBP27.89■■■□□ 2.06
CACNA1A-243ENST00000637616 KDM5BQ9UGL1 1544 aa27.88■■■□□ 2.05
CACNA1A-243ENST00000637616 CNGB1Q14028 1251 aaPredicted RBP27.88■■■□□ 2.05
CACNA1A-243ENST00000637616 PPP4R2Q9NY27 417 aa27.86■■■□□ 2.05
CACNA1A-243ENST00000637616 CC2D2AQ9P2K1 1620 aa27.85■■■□□ 2.05
CACNA1A-243ENST00000637616 EIF4G2P78344 907 aaKnown RBP eCLIP27.85■■■□□ 2.05
CACNA1A-243ENST00000637616 PRDM2Q13029 1718 aa27.83■■■□□ 2.05
CACNA1A-243ENST00000637616 FMN1Q68DA7 1419 aa27.83■■■□□ 2.05
CACNA1A-243ENST00000637616 MRS2Q9HD23 443 aa27.82■■■□□ 2.04
CACNA1A-243ENST00000637616 NCOA2Q15596 1464 aa27.82■■■□□ 2.04
CACNA1A-243ENST00000637616 EFCAB5A4FU69 1503 aa27.8■■■□□ 2.04
CACNA1A-243ENST00000637616 FANCD2Q9BXW9 1451 aa27.8■■■□□ 2.04
CACNA1A-243ENST00000637616 SNAPC4Q5SXM2 1469 aa27.79■■■□□ 2.04
CACNA1A-243ENST00000637616 SENP3-EIF4A1A0A087X0R7 540 aa27.78■■■□□ 2.04
CACNA1A-243ENST00000637616 L3MBTL2Q969R5 705 aa27.78■■■□□ 2.04
CACNA1A-243ENST00000637616 ARID3CA6NKF2 412 aa27.78■■■□□ 2.04
CACNA1A-243ENST00000637616 MYOM3Q5VTT5 1437 aa27.78■■■□□ 2.04
CACNA1A-243ENST00000637616 PRKRIP1Q9H875 184 aaPredicted RBP27.77■■■□□ 2.04
CACNA1A-243ENST00000637616 POLA1P09884 1462 aaPredicted RBP27.74■■■□□ 2.03
CACNA1A-243ENST00000637616 CNTLNQ9NXG0 1405 aa27.72■■■□□ 2.03
CACNA1A-243ENST00000637616 DENND4BO75064 1496 aaPredicted RBP27.71■■■□□ 2.03
CACNA1A-243ENST00000637616 MPHOSPH9Q99550 1183 aa27.71■■■□□ 2.03
CACNA1A-243ENST00000637616 ABCA10Q8WWZ4 1543 aa27.7■■■□□ 2.03
CACNA1A-243ENST00000637616 TDRD9Q8NDG6 1382 aaKnown RBP27.68■■■□□ 2.02
CACNA1A-243ENST00000637616 ERICH6BQ5W0A0 696 aa27.67■■■□□ 2.02
CACNA1A-243ENST00000637616 NBPF8Q3BBV2 869 aa27.66■■■□□ 2.02
CACNA1A-243ENST00000637616 CCDC7Q96M83 1385 aa27.66■■■□□ 2.02
CACNA1A-243ENST00000637616 LRRIQ1Q96JM4 1722 aa27.66■■■□□ 2.02
CACNA1A-243ENST00000637616 TOPBP1Q92547 1522 aa27.65■■■□□ 2.02
CACNA1A-243ENST00000637616 KDM6BO15054 1643 aa27.63■■■□□ 2.01
CACNA1A-243ENST00000637616 CTTNBP2Q8WZ74 1663 aa27.63■■■□□ 2.01
CACNA1A-243ENST00000637616 NBR1Q14596 966 aa27.63■■■□□ 2.01
CACNA1A-243ENST00000637616 POLR3GLQ9BT43 218 aa27.63■■■□□ 2.01
CACNA1A-243ENST00000637616 ZBED9Q6R2W3 1325 aa27.63■■■□□ 2.01
CACNA1A-243ENST00000637616 NESP48681 1621 aa27.62■■■□□ 2.01
CACNA1A-243ENST00000637616 GRIN2BQ13224 1484 aa27.59■■■□□ 2.01
CACNA1A-243ENST00000637616 DEKP35659 375 aaKnown RBP27.59■■■□□ 2.01
CACNA1A-243ENST00000637616 DNMBPQ6XZF7 1577 aa27.59■■■□□ 2.01
CACNA1A-243ENST00000637616 PAK3O75914 559 aaPredicted RBP27.59■■■□□ 2.01
CACNA1A-243ENST00000637616 MAGI3Q5TCQ9 1506 aa27.58■■■□□ 2.01
CACNA1A-243ENST00000637616 KIF7Q2M1P5 1343 aa27.57■■■□□ 2
CACNA1A-243ENST00000637616 NCOA1Q15788 1441 aa27.57■■■□□ 2
CACNA1A-243ENST00000637616 SUPT6HQ7KZ85 1726 aaKnown RBP27.56■■■□□ 2
CACNA1A-243ENST00000637616 CUL7Q14999 1698 aa27.54■■■□□ 2
CACNA1A-243ENST00000637616 AKNAQ7Z591 1439 aa27.54■■■□□ 2
CACNA1A-243ENST00000637616 UGGT2Q9NYU1 1516 aa27.52■■■□□ 2
CACNA1A-243ENST00000637616 NOP58Q9Y2X3 529 aaKnown RBP27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms