RNA–Protein interactions for RNA: ENST00000635888.1

CPT2-204, Transcript of carnitine palmitoyltransferase 2, humanhuman

TSL 5

Gene CPT2, Length 2,889 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT2-204ENST00000635888 TSHZ2Q9NRE2 1034 aa23.6■■□□□ 1.37
CPT2-204ENST00000635888 ARAP1Q96P48 1450 aa23.56■■□□□ 1.36
CPT2-204ENST00000635888 CLSPNQ9HAW4 1339 aa23.55■■□□□ 1.36
CPT2-204ENST00000635888 ERCC6Q03468 1493 aa23.54■■□□□ 1.36
CPT2-204ENST00000635888 IGF1RP08069 1367 aa23.53■■□□□ 1.36
CPT2-204ENST00000635888 PRXQ9BXM0 1461 aa23.52■■□□□ 1.36
CPT2-204ENST00000635888 MRC2Q9UBG0 1479 aa23.52■■□□□ 1.36
CPT2-204ENST00000635888 TDRD9Q8NDG6 1382 aaKnown RBP23.51■■□□□ 1.35
CPT2-204ENST00000635888 ABCA10Q8WWZ4 1543 aa23.5■■□□□ 1.35
CPT2-204ENST00000635888 HIRIP3Q9BW71 556 aaPredicted RBP23.45■■□□□ 1.34
CPT2-204ENST00000635888 DDX10Q13206 875 aaKnown RBP23.44■■□□□ 1.34
CPT2-204ENST00000635888 CCNB3Q8WWL7 1395 aa23.42■■□□□ 1.34
CPT2-204ENST00000635888 CARMIL1Q5VZK9 1371 aa23.4■■□□□ 1.34
CPT2-204ENST00000635888 SIN3AQ96ST3 1273 aa23.4■■□□□ 1.34
CPT2-204ENST00000635888 FKBP8Q14318 412 aa23.4■■□□□ 1.34
CPT2-204ENST00000635888 RRBP1Q9P2E9 1410 aaKnown RBP23.38■■□□□ 1.33
CPT2-204ENST00000635888 WDR97A6NE52 1622 aa23.38■■□□□ 1.33
CPT2-204ENST00000635888 ERICH3Q5RHP9 1530 aa23.37■■□□□ 1.33
CPT2-204ENST00000635888 TARBP1Q13395 1621 aaKnown RBP23.37■■□□□ 1.33
CPT2-204ENST00000635888 RAB3GAP2Q9H2M9 1393 aa23.37■■□□□ 1.33
CPT2-204ENST00000635888 WDR62O43379 1518 aa23.36■■□□□ 1.33
CPT2-204ENST00000635888 AQRO60306 1485 aaKnown RBP eCLIP23.33■■□□□ 1.33
CPT2-204ENST00000635888 THOC2Q8NI27 1593 aaKnown RBP23.33■■□□□ 1.33
CPT2-204ENST00000635888 GAPVD1Q14C86 1478 aa23.32■■□□□ 1.32
CPT2-204ENST00000635888 ANP32EQ9BTT0 268 aa23.32■■□□□ 1.32
CPT2-204ENST00000635888 ZNF608Q9ULD9 1512 aaPredicted RBP23.31■■□□□ 1.32
CPT2-204ENST00000635888 FAM50AQ14320 339 aaKnown RBP23.3■■□□□ 1.32
CPT2-204ENST00000635888 ABCA5Q8WWZ7 1642 aa23.3■■□□□ 1.32
CPT2-204ENST00000635888 TRIM52Q96A61 297 aa23.3■■□□□ 1.32
CPT2-204ENST00000635888 ATP1B4Q9UN42 357 aaPredicted RBP23.29■■□□□ 1.32
CPT2-204ENST00000635888 ARHGAP35Q9NRY4 1499 aa23.28■■□□□ 1.32
CPT2-204ENST00000635888 P3H3Q8IVL6 736 aa23.25■■□□□ 1.31
CPT2-204ENST00000635888 MAPKBP1O60336 1514 aa23.24■■□□□ 1.31
CPT2-204ENST00000635888 IFT140Q96RY7 1462 aa23.2■■□□□ 1.31
CPT2-204ENST00000635888 CUL7Q14999 1698 aa23.15■■□□□ 1.3
CPT2-204ENST00000635888 SETD5Q9C0A6 1442 aa23.14■■□□□ 1.3
CPT2-204ENST00000635888 PHLDB1Q86UU1 1377 aa23.14■■□□□ 1.29
CPT2-204ENST00000635888 PBRM1Q86U86 1689 aa23.12■■□□□ 1.29
CPT2-204ENST00000635888 PPP1R15AO75807 674 aaPredicted RBP23.12■■□□□ 1.29
CPT2-204ENST00000635888 NEFLP07196 543 aa23.11■■□□□ 1.29
CPT2-204ENST00000635888 RBM19Q9Y4C8 960 aaKnown RBP23.09■■□□□ 1.29
CPT2-204ENST00000635888 EIF4G3O43432 1585 aaKnown RBP23.09■■□□□ 1.29
CPT2-204ENST00000635888 GRIN2BQ13224 1484 aa23.08■■□□□ 1.28
CPT2-204ENST00000635888 ANP32CO43423 234 aa23.04■■□□□ 1.28
CPT2-204ENST00000635888 IRX6P78412 446 aaPredicted RBP23.03■■□□□ 1.28
CPT2-204ENST00000635888 SNAPC4Q5SXM2 1469 aa23.03■■□□□ 1.28
CPT2-204ENST00000635888 ADAMTS12P58397 1594 aa23.01■■□□□ 1.27
CPT2-204ENST00000635888 FHAD1B1AJZ9 1412 aa23.01■■□□□ 1.27
CPT2-204ENST00000635888 TIAM1Q13009 1591 aa23.01■■□□□ 1.27
CPT2-204ENST00000635888 BCL11AQ9H165 835 aa22.99■■□□□ 1.27
CPT2-204ENST00000635888 LRRC9Q6ZRR7 1453 aa22.99■■□□□ 1.27
CPT2-204ENST00000635888 FBLN2P98095 1184 aa22.97■■□□□ 1.27
CPT2-204ENST00000635888 CTTNBP2Q8WZ74 1663 aa22.95■■□□□ 1.26
CPT2-204ENST00000635888 FHOD3Q2V2M9 1422 aa22.93■■□□□ 1.26
CPT2-204ENST00000635888 CCER2I3L3R5 266 aa22.89■■□□□ 1.26
CPT2-204ENST00000635888 CHMP7Q8WUX9 453 aaPredicted RBP22.88■■□□□ 1.25
CPT2-204ENST00000635888 MSH5O43196 834 aa22.88■■□□□ 1.25
CPT2-204ENST00000635888 HNRNPUQ00839 825 aaKnown RBP eCLIP22.87■■□□□ 1.25
CPT2-204ENST00000635888 TONSLQ96HA7 1378 aa22.86■■□□□ 1.25
CPT2-204ENST00000635888 GRIN2AQ12879 1464 aa22.84■■□□□ 1.25
CPT2-204ENST00000635888 MAGI1Q96QZ7 1491 aaPredicted RBP22.83■■□□□ 1.24
CPT2-204ENST00000635888 PCF11O94913 1555 aaKnown RBP22.81■■□□□ 1.24
CPT2-204ENST00000635888 SYNJ2O15056 1496 aa22.8■■□□□ 1.24
CPT2-204ENST00000635888 TIMELESSQ9UNS1 1208 aa22.78■■□□□ 1.24
CPT2-204ENST00000635888 IQGAP2Q13576 1575 aa22.77■■□□□ 1.24
CPT2-204ENST00000635888 MAP3K1Q13233 1512 aa22.77■■□□□ 1.24
CPT2-204ENST00000635888 EFCAB5A4FU69 1503 aa22.76■■□□□ 1.23
CPT2-204ENST00000635888 CEP170Q5SW79 1584 aa22.74■■□□□ 1.23
CPT2-204ENST00000635888 SAMD9Q5K651 1589 aa22.73■■□□□ 1.23
CPT2-204ENST00000635888 CCDC184Q52MB2 194 aa22.71■■□□□ 1.23
CPT2-204ENST00000635888 PTPRKQ15262 1439 aa22.71■■□□□ 1.23
CPT2-204ENST00000635888 KIAA0586Q9BVV6 1533 aa22.7■■□□□ 1.22
CPT2-204ENST00000635888 CHIC2Q9UKJ5 165 aa22.69■■□□□ 1.22
CPT2-204ENST00000635888 CCDC18Q5T9S5 1454 aa22.69■■□□□ 1.22
CPT2-204ENST00000635888 CDK11AQ9UQ88 783 aaPredicted RBP22.68■■□□□ 1.22
CPT2-204ENST00000635888 RRP7BPQ9NSQ0 103 aa22.66■■□□□ 1.22
CPT2-204ENST00000635888 CNGB1Q14028 1251 aaPredicted RBP22.65■■□□□ 1.22
CPT2-204ENST00000635888 CFAP43Q8NDM7 1665 aa22.65■■□□□ 1.22
CPT2-204ENST00000635888 FGD6Q6ZV73 1430 aa22.65■■□□□ 1.22
CPT2-204ENST00000635888 ARID3CA6NKF2 412 aa22.64■■□□□ 1.22
CPT2-204ENST00000635888 HSPA5P11021 654 aaKnown RBP22.64■■□□□ 1.22
CPT2-204ENST00000635888 WASHC2AQ641Q2 1341 aa22.64■■□□□ 1.21
CPT2-204ENST00000635888 MTUS2Q5JR59 1369 aa22.64■■□□□ 1.21
CPT2-204ENST00000635888 NUP160Q12769 1436 aa22.63■■□□□ 1.21
CPT2-204ENST00000635888 ERICH6Q7L0X2 663 aa22.63■■□□□ 1.21
CPT2-204ENST00000635888 FMN1Q68DA7 1419 aa22.63■■□□□ 1.21
CPT2-204ENST00000635888 FAM9BQ8IZU0 186 aa22.62■■□□□ 1.21
CPT2-204ENST00000635888 DISP1Q96F81 1524 aa22.61■■□□□ 1.21
CPT2-204ENST00000635888 UGGT2Q9NYU1 1516 aa22.61■■□□□ 1.21
CPT2-204ENST00000635888 CASKIN1Q8WXD9 1431 aa22.61■■□□□ 1.21
CPT2-204ENST00000635888 JPH4Q96JJ6 628 aa22.6■■□□□ 1.21
CPT2-204ENST00000635888 FOXD1Q16676 465 aa22.59■■□□□ 1.21
CPT2-204ENST00000635888 CHD1O14646 1710 aa22.59■■□□□ 1.21
CPT2-204ENST00000635888 B4GALNT3Q6L9W6 998 aa22.59■■□□□ 1.21
CPT2-204ENST00000635888 SENP3-EIF4A1A0A087X0R7 540 aa22.58■■□□□ 1.21
CPT2-204ENST00000635888 FYCO1Q9BQS8 1478 aa22.58■■□□□ 1.21
CPT2-204ENST00000635888 UACAQ9BZF9 1416 aa22.57■■□□□ 1.2
CPT2-204ENST00000635888 KIAA0556O60303 1618 aa22.55■■□□□ 1.2
CPT2-204ENST00000635888 C11orf95C9JLR9 678 aaPredicted RBP22.54■■□□□ 1.2
CPT2-204ENST00000635888 HFM1A2PYH4 1435 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms