RNA–Protein interactions for RNA: ENST00000635616.1

LINC01748-205, Transcript of long intergenic non-protein coding RNA 1748, humanhuman

TSL 5 BASIC

Gene LINC01748, Length 2,143 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01748-205ENST00000635616 CFTRP13569 1480 aa12.87□□□□□ -0.35
LINC01748-205ENST00000635616 SPDYE4A6NLX3 237 aa12.87□□□□□ -0.35
LINC01748-205ENST00000635616 CEP162Q5TB80 1403 aa12.87□□□□□ -0.35
LINC01748-205ENST00000635616 NPM1P06748 294 aaKnown RBP eCLIP12.86□□□□□ -0.35
LINC01748-205ENST00000635616 TIMELESSQ9UNS1 1208 aa12.86□□□□□ -0.35
LINC01748-205ENST00000635616 FBXO3Q9UK99 471 aa12.85□□□□□ -0.35
LINC01748-205ENST00000635616 ERICH3Q5RHP9 1530 aa12.84□□□□□ -0.35
LINC01748-205ENST00000635616 U3KPZ7 1027 aaPredicted RBP12.83□□□□□ -0.35
LINC01748-205ENST00000635616 MKRN4PQ13434 485 aaPredicted RBP12.82□□□□□ -0.36
LINC01748-205ENST00000635616 ZEB1P37275 1124 aaPredicted RBP12.8□□□□□ -0.36
LINC01748-205ENST00000635616 CC2D2AQ9P2K1 1620 aa12.8□□□□□ -0.36
LINC01748-205ENST00000635616 RUSC2Q8N2Y8 1516 aa12.79□□□□□ -0.36
LINC01748-205ENST00000635616 PAXIP1Q6ZW49 1069 aaPredicted RBP12.79□□□□□ -0.36
LINC01748-205ENST00000635616 CFAP44Q96MT7 982 aa12.78□□□□□ -0.36
LINC01748-205ENST00000635616 CUX1P39880 1505 aa12.78□□□□□ -0.36
LINC01748-205ENST00000635616 ZNF219Q9P2Y4 722 aaPredicted RBP12.77□□□□□ -0.37
LINC01748-205ENST00000635616 PROM2Q8N271 834 aa12.74□□□□□ -0.37
LINC01748-205ENST00000635616 TULP1O00294 542 aaPredicted RBP12.73□□□□□ -0.37
LINC01748-205ENST00000635616 TSHZ2Q9NRE2 1034 aa12.71□□□□□ -0.37
LINC01748-205ENST00000635616 CADPSQ9ULU8 1353 aa12.71□□□□□ -0.37
LINC01748-205ENST00000635616 KIF27Q86VH2 1401 aa12.71□□□□□ -0.37
LINC01748-205ENST00000635616 APLP2Q06481 763 aa12.7□□□□□ -0.38
LINC01748-205ENST00000635616 PRXQ9BXM0 1461 aa12.7□□□□□ -0.38
LINC01748-205ENST00000635616 UBTFP17480 764 aaKnown RBP12.7□□□□□ -0.38
LINC01748-205ENST00000635616 SAMD1Q6SPF0 538 aaPredicted RBP12.7□□□□□ -0.38
LINC01748-205ENST00000635616 CLIP1P30622 1438 aa12.69□□□□□ -0.38
LINC01748-205ENST00000635616 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.67□□□□□ -0.38
LINC01748-205ENST00000635616 HNRNPUL2Q1KMD3 747 aaKnown RBP12.67□□□□□ -0.38
LINC01748-205ENST00000635616 RAPGEF2Q9Y4G8 1499 aa12.67□□□□□ -0.38
LINC01748-205ENST00000635616 VPS8Q8N3P4 1428 aa12.67□□□□□ -0.38
LINC01748-205ENST00000635616 LAMC3Q9Y6N6 1575 aa12.65□□□□□ -0.38
LINC01748-205ENST00000635616 DNMBPQ6XZF7 1577 aa12.64□□□□□ -0.39
LINC01748-205ENST00000635616 CAPN15O75808 1086 aa12.62□□□□□ -0.39
LINC01748-205ENST00000635616 BBXQ8WY36 941 aaPredicted RBP12.61□□□□□ -0.39
LINC01748-205ENST00000635616 FANCD2Q9BXW9 1451 aa12.6□□□□□ -0.39
LINC01748-205ENST00000635616 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.59□□□□□ -0.39
LINC01748-205ENST00000635616 RGL2O15211 777 aa12.59□□□□□ -0.39
LINC01748-205ENST00000635616 FGD5Q6ZNL6 1462 aa12.58□□□□□ -0.4
LINC01748-205ENST00000635616 CUL7Q14999 1698 aa12.57□□□□□ -0.4
LINC01748-205ENST00000635616 ECM2O94769 699 aaPredicted RBP12.56□□□□□ -0.4
LINC01748-205ENST00000635616 SPINK5Q9NQ38 1064 aaPredicted RBP12.56□□□□□ -0.4
LINC01748-205ENST00000635616 CUX2O14529 1486 aa12.55□□□□□ -0.4
LINC01748-205ENST00000635616 WDR97A6NE52 1622 aa12.54□□□□□ -0.4
LINC01748-205ENST00000635616 ABCA10Q8WWZ4 1543 aa12.53□□□□□ -0.4
LINC01748-205ENST00000635616 ARAP1Q96P48 1450 aa12.52□□□□□ -0.41
LINC01748-205ENST00000635616 TOPBP1Q92547 1522 aa12.52□□□□□ -0.41
LINC01748-205ENST00000635616 MAP3K1Q13233 1512 aa12.48□□□□□ -0.41
LINC01748-205ENST00000635616 DSG3P32926 999 aa12.48□□□□□ -0.41
LINC01748-205ENST00000635616 CTTNBP2Q8WZ74 1663 aa12.48□□□□□ -0.41
LINC01748-205ENST00000635616 PDS5BQ9NTI5 1447 aa12.47□□□□□ -0.41
LINC01748-205ENST00000635616 POLA1P09884 1462 aaPredicted RBP12.47□□□□□ -0.41
LINC01748-205ENST00000635616 EFCAB5A4FU69 1503 aa12.47□□□□□ -0.41
LINC01748-205ENST00000635616 PPARGC1BQ86YN6 1023 aaKnown RBP12.46□□□□□ -0.41
LINC01748-205ENST00000635616 GTF3C3Q9Y5Q9 886 aa12.46□□□□□ -0.42
LINC01748-205ENST00000635616 IGF1RP08069 1367 aa12.45□□□□□ -0.42
LINC01748-205ENST00000635616 SPRYD3Q8NCJ5 442 aa12.44□□□□□ -0.42
LINC01748-205ENST00000635616 ABCA5Q8WWZ7 1642 aa12.44□□□□□ -0.42
LINC01748-205ENST00000635616 ARHGAP35Q9NRY4 1499 aa12.44□□□□□ -0.42
LINC01748-205ENST00000635616 CARMIL1Q5VZK9 1371 aa12.43□□□□□ -0.42
LINC01748-205ENST00000635616 TRHP20396 242 aaPredicted RBP12.43□□□□□ -0.42
LINC01748-205ENST00000635616 KLHL34Q8N239 644 aa12.43□□□□□ -0.42
LINC01748-205ENST00000635616 CFAP43Q8NDM7 1665 aa12.42□□□□□ -0.42
LINC01748-205ENST00000635616 KIF21AQ7Z4S6 1674 aa12.41□□□□□ -0.42
LINC01748-205ENST00000635616 FHAD1B1AJZ9 1412 aa12.41□□□□□ -0.42
LINC01748-205ENST00000635616 CCER1Q8TC90 406 aaPredicted RBP12.4□□□□□ -0.42
LINC01748-205ENST00000635616 NESP48681 1621 aa12.4□□□□□ -0.42
LINC01748-205ENST00000635616 URB2Q14146 1524 aaKnown RBP12.4□□□□□ -0.43
LINC01748-205ENST00000635616 DAXXQ9UER7 740 aaPredicted RBP12.39□□□□□ -0.43
LINC01748-205ENST00000635616 TIAM1Q13009 1591 aa12.38□□□□□ -0.43
LINC01748-205ENST00000635616 SPOCK2Q92563 424 aa12.38□□□□□ -0.43
LINC01748-205ENST00000635616 CHGAP10645 457 aaKnown RBP12.37□□□□□ -0.43
LINC01748-205ENST00000635616 RRBP1Q9P2E9 1410 aaKnown RBP12.36□□□□□ -0.43
LINC01748-205ENST00000635616 AQRO60306 1485 aaKnown RBP eCLIP12.35□□□□□ -0.43
LINC01748-205ENST00000635616 NBR1Q14596 966 aa12.35□□□□□ -0.43
LINC01748-205ENST00000635616 FYCO1Q9BQS8 1478 aa12.34□□□□□ -0.43
LINC01748-205ENST00000635616 RAD54L2Q9Y4B4 1467 aa12.34□□□□□ -0.43
LINC01748-205ENST00000635616 PBRM1Q86U86 1689 aa12.33□□□□□ -0.44
LINC01748-205ENST00000635616 TARBP1Q13395 1621 aaKnown RBP12.33□□□□□ -0.44
LINC01748-205ENST00000635616 THOC2Q8NI27 1593 aaKnown RBP12.33□□□□□ -0.44
LINC01748-205ENST00000635616 PCF11O94913 1555 aaKnown RBP12.32□□□□□ -0.44
LINC01748-205ENST00000635616 SAMD9Q5K651 1589 aa12.31□□□□□ -0.44
LINC01748-205ENST00000635616 GAPVD1Q14C86 1478 aa12.31□□□□□ -0.44
LINC01748-205ENST00000635616 POLA2Q14181 598 aa12.31□□□□□ -0.44
LINC01748-205ENST00000635616 MRC2Q9UBG0 1479 aa12.3□□□□□ -0.44
LINC01748-205ENST00000635616 CLSPNQ9HAW4 1339 aa12.3□□□□□ -0.44
LINC01748-205ENST00000635616 TTBK1Q5TCY1 1321 aaPredicted RBP12.29□□□□□ -0.44
LINC01748-205ENST00000635616 FMN1Q68DA7 1419 aa12.28□□□□□ -0.44
LINC01748-205ENST00000635616 ABCB7O75027 752 aa12.28□□□□□ -0.44
LINC01748-205ENST00000635616 DNAJC5Q9H3Z4 198 aa12.28□□□□□ -0.44
LINC01748-205ENST00000635616 ARXQ96QS3 562 aa12.27□□□□□ -0.45
LINC01748-205ENST00000635616 CASKIN1Q8WXD9 1431 aa12.26□□□□□ -0.45
LINC01748-205ENST00000635616 LRRC9Q6ZRR7 1453 aa12.26□□□□□ -0.45
LINC01748-205ENST00000635616 ADAMTS12P58397 1594 aa12.26□□□□□ -0.45
LINC01748-205ENST00000635616 WDR62O43379 1518 aa12.26□□□□□ -0.45
LINC01748-205ENST00000635616 CCNB3Q8WWL7 1395 aa12.25□□□□□ -0.45
LINC01748-205ENST00000635616 RANGAP1P46060 587 aaPredicted RBP12.24□□□□□ -0.45
LINC01748-205ENST00000635616 TMEM132AQ24JP5 1023 aa12.22□□□□□ -0.45
LINC01748-205ENST00000635616 IFT140Q96RY7 1462 aa12.21□□□□□ -0.45
LINC01748-205ENST00000635616 SNAPC4Q5SXM2 1469 aa12.2□□□□□ -0.46
LINC01748-205ENST00000635616 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms