RNA–Protein interactions for RNA: ENST00000633674.1

LINC01002-232, Transcript of long intergenic non-protein coding RNA 1002, humanhuman

TSL 1 (best)

Gene LINC01002, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01002-232ENST00000633674 REM2Q8IYK8 340 aaPredicted RBP13.98□□□□□ -0.17
LINC01002-232ENST00000633674 PIP4P2Q8N4L2 257 aa13.96□□□□□ -0.17
LINC01002-232ENST00000633674 AQRO60306 1485 aaKnown RBP eCLIP13.94□□□□□ -0.18
LINC01002-232ENST00000633674 EIF4G3O43432 1585 aaKnown RBP13.94□□□□□ -0.18
LINC01002-232ENST00000633674 SUPT5HO00267 1087 aaKnown RBP13.93□□□□□ -0.18
LINC01002-232ENST00000633674 POLA1P09884 1462 aaPredicted RBP13.93□□□□□ -0.18
LINC01002-232ENST00000633674 TARBP1Q13395 1621 aaKnown RBP13.92□□□□□ -0.18
LINC01002-232ENST00000633674 RAD54L2Q9Y4B4 1467 aa13.91□□□□□ -0.18
LINC01002-232ENST00000633674 FOXD4L1Q9NU39 408 aa13.9□□□□□ -0.18
LINC01002-232ENST00000633674 FBLN2P98095 1184 aa13.89□□□□□ -0.19
LINC01002-232ENST00000633674 ATF5Q9Y2D1 282 aaPredicted RBP13.89□□□□□ -0.19
LINC01002-232ENST00000633674 SOGA1O94964 1423 aa13.89□□□□□ -0.19
LINC01002-232ENST00000633674 RIMBP3CA6NJZ7 1639 aa13.87□□□□□ -0.19
LINC01002-232ENST00000633674 RIMBP3BA6NNM3 1639 aa13.87□□□□□ -0.19
LINC01002-232ENST00000633674 TDRD9Q8NDG6 1382 aaKnown RBP13.87□□□□□ -0.19
LINC01002-232ENST00000633674 RIMBP3Q9UFD9 1639 aa13.87□□□□□ -0.19
LINC01002-232ENST00000633674 FGD5Q6ZNL6 1462 aa13.86□□□□□ -0.19
LINC01002-232ENST00000633674 HAX1O00165 279 aa13.85□□□□□ -0.19
LINC01002-232ENST00000633674 CUX1P39880 1505 aa13.85□□□□□ -0.19
LINC01002-232ENST00000633674 CHD1O14646 1710 aa13.84□□□□□ -0.19
LINC01002-232ENST00000633674 FXR2P51116 673 aaKnown RBP eCLIP13.83□□□□□ -0.2
LINC01002-232ENST00000633674 ARHGEF11O15085 1522 aa13.83□□□□□ -0.2
LINC01002-232ENST00000633674 PITPNM1O00562 1244 aa13.82□□□□□ -0.2
LINC01002-232ENST00000633674 SLC4A1APQ9BWU0 796 aaKnown RBP13.8□□□□□ -0.2
LINC01002-232ENST00000633674 CYB5RLQ6IPT4 315 aa13.79□□□□□ -0.2
LINC01002-232ENST00000633674 SNAPC4Q5SXM2 1469 aa13.78□□□□□ -0.2
LINC01002-232ENST00000633674 CHMP7Q8WUX9 453 aaPredicted RBP13.77□□□□□ -0.21
LINC01002-232ENST00000633674 GRIN2BQ13224 1484 aa13.74□□□□□ -0.21
LINC01002-232ENST00000633674 WDR97A6NE52 1622 aa13.74□□□□□ -0.21
LINC01002-232ENST00000633674 MAGI1Q96QZ7 1491 aaPredicted RBP13.72□□□□□ -0.21
LINC01002-232ENST00000633674 GAPVD1Q14C86 1478 aa13.71□□□□□ -0.21
LINC01002-232ENST00000633674 ARAP1Q96P48 1450 aa13.7□□□□□ -0.22
LINC01002-232ENST00000633674 SYNJ2O15056 1496 aa13.68□□□□□ -0.22
LINC01002-232ENST00000633674 ABCA10Q8WWZ4 1543 aa13.68□□□□□ -0.22
LINC01002-232ENST00000633674 SYNJ1O43426 1573 aa13.67□□□□□ -0.22
LINC01002-232ENST00000633674 PBRM1Q86U86 1689 aa13.66□□□□□ -0.22
LINC01002-232ENST00000633674 CLASP1Q7Z460 1538 aa13.66□□□□□ -0.22
LINC01002-232ENST00000633674 WRNQ14191 1432 aaPredicted RBP eCLIP13.64□□□□□ -0.23
LINC01002-232ENST00000633674 ABCA5Q8WWZ7 1642 aa13.64□□□□□ -0.23
LINC01002-232ENST00000633674 SPDYE2BA6NHP3 402 aa13.62□□□□□ -0.23
LINC01002-232ENST00000633674 SPDYE6P0CI01 402 aa13.62□□□□□ -0.23
LINC01002-232ENST00000633674 SPDYE2Q495Y8 402 aa13.62□□□□□ -0.23
LINC01002-232ENST00000633674 TOP2BQ02880 1626 aa13.61□□□□□ -0.23
LINC01002-232ENST00000633674 ATXN8OSP0DMR3 200 aa13.6□□□□□ -0.23
LINC01002-232ENST00000633674 BIVM-ERCC5R4GMW8 1640 aa13.6□□□□□ -0.23
LINC01002-232ENST00000633674 GRIN2AQ12879 1464 aa13.56□□□□□ -0.24
LINC01002-232ENST00000633674 ADAMTS12P58397 1594 aa13.54□□□□□ -0.24
LINC01002-232ENST00000633674 EVX2Q03828 476 aa13.54□□□□□ -0.24
LINC01002-232ENST00000633674 FHAD1B1AJZ9 1412 aa13.53□□□□□ -0.24
LINC01002-232ENST00000633674 CEP170Q5SW79 1584 aa13.5□□□□□ -0.25
LINC01002-232ENST00000633674 ERICH3Q5RHP9 1530 aa13.5□□□□□ -0.25
LINC01002-232ENST00000633674 NUP160Q12769 1436 aa13.5□□□□□ -0.25
LINC01002-232ENST00000633674 ERCC6L2Q5T890 1561 aa13.49□□□□□ -0.25
LINC01002-232ENST00000633674 SPDYE1Q8NFV5 336 aaPredicted RBP13.49□□□□□ -0.25
LINC01002-232ENST00000633674 PRKAR2AP13861 404 aaKnown RBP13.47□□□□□ -0.25
LINC01002-232ENST00000633674 ZBTB22O15209 634 aa13.42□□□□□ -0.26
LINC01002-232ENST00000633674 JPH4Q96JJ6 628 aa13.42□□□□□ -0.26
LINC01002-232ENST00000633674 SHROOM2Q13796 1616 aa13.42□□□□□ -0.26
LINC01002-232ENST00000633674 C19orf67A6NJJ6 358 aa13.41□□□□□ -0.26
LINC01002-232ENST00000633674 CLEC11AQ9Y240 323 aa13.41□□□□□ -0.26
LINC01002-232ENST00000633674 PRG4Q92954 1404 aaPredicted RBP13.4□□□□□ -0.26
LINC01002-232ENST00000633674 IGF1RP08069 1367 aa13.38□□□□□ -0.27
LINC01002-232ENST00000633674 KIF27Q86VH2 1401 aa13.38□□□□□ -0.27
LINC01002-232ENST00000633674 SSUH2Q9Y2M2 353 aa13.35□□□□□ -0.27
LINC01002-232ENST00000633674 RUSC2Q8N2Y8 1516 aa13.34□□□□□ -0.27
LINC01002-232ENST00000633674 ZNF692Q9BU19 519 aaPredicted RBP13.33□□□□□ -0.28
LINC01002-232ENST00000633674 CUL7Q14999 1698 aa13.31□□□□□ -0.28
LINC01002-232ENST00000633674 KIAA0586Q9BVV6 1533 aa13.3□□□□□ -0.28
LINC01002-232ENST00000633674 CARMIL1Q5VZK9 1371 aa13.3□□□□□ -0.28
LINC01002-232ENST00000633674 GABBR2O75899 941 aa13.29□□□□□ -0.28
LINC01002-232ENST00000633674 NPM1P06748 294 aaKnown RBP eCLIP13.28□□□□□ -0.28
LINC01002-232ENST00000633674 MKRN4PQ13434 485 aaPredicted RBP13.26□□□□□ -0.29
LINC01002-232ENST00000633674 TTBK1Q5TCY1 1321 aaPredicted RBP13.26□□□□□ -0.29
LINC01002-232ENST00000633674 LHX8Q68G74 356 aa13.25□□□□□ -0.29
LINC01002-232ENST00000633674 FAM69CQ0P6D2 419 aa13.23□□□□□ -0.29
LINC01002-232ENST00000633674 ADCY10Q96PN6 1610 aa13.22□□□□□ -0.29
LINC01002-232ENST00000633674 KIF13AQ9H1H9 1805 aa13.22□□□□□ -0.29
LINC01002-232ENST00000633674 PTPRGP23470 1445 aa13.21□□□□□ -0.3
LINC01002-232ENST00000633674 ABCC10Q5T3U5 1492 aa13.19□□□□□ -0.3
LINC01002-232ENST00000633674 CARMIL2Q6F5E8 1435 aa13.18□□□□□ -0.3
LINC01002-232ENST00000633674 MAPKBP1O60336 1514 aa13.18□□□□□ -0.3
LINC01002-232ENST00000633674 IQGAP2Q13576 1575 aa13.17□□□□□ -0.3
LINC01002-232ENST00000633674 PRR29P0C7W0 189 aa13.17□□□□□ -0.3
LINC01002-232ENST00000633674 TNIKQ9UKE5 1360 aa13.17□□□□□ -0.3
LINC01002-232ENST00000633674 RAPGEF2Q9Y4G8 1499 aa13.16□□□□□ -0.3
LINC01002-232ENST00000633674 CHADLQ6NUI6 762 aa13.15□□□□□ -0.3
LINC01002-232ENST00000633674 DIP2BQ9P265 1576 aa13.14□□□□□ -0.31
LINC01002-232ENST00000633674 CLCN6P51797 869 aa13.12□□□□□ -0.31
LINC01002-232ENST00000633674 DISP1Q96F81 1524 aa13.11□□□□□ -0.31
LINC01002-232ENST00000633674 ABCC2Q92887 1545 aa13.1□□□□□ -0.31
LINC01002-232ENST00000633674 UACAQ9BZF9 1416 aa13.09□□□□□ -0.31
LINC01002-232ENST00000633674 UGGT2Q9NYU1 1516 aa13.08□□□□□ -0.31
LINC01002-232ENST00000633674 TSPOAP1O95153 1857 aa13.08□□□□□ -0.32
LINC01002-232ENST00000633674 ASXL2Q76L83 1435 aa13.07□□□□□ -0.32
LINC01002-232ENST00000633674 UHRF1BP1LA0JNW5 1464 aa13.07□□□□□ -0.32
LINC01002-232ENST00000633674 PLB1Q6P1J6 1458 aa13.05□□□□□ -0.32
LINC01002-232ENST00000633674 KIAA0556O60303 1618 aa13.05□□□□□ -0.32
LINC01002-232ENST00000633674 KDM6BO15054 1643 aa13.04□□□□□ -0.32
LINC01002-232ENST00000633674 CD44P16070 742 aaKnown RBP13.03□□□□□ -0.32
LINC01002-232ENST00000633674 PRXQ9BXM0 1461 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms