RNA–Protein interactions for RNA: ENST00000633674.1

LINC01002-232, Transcript of long intergenic non-protein coding RNA 1002, humanhuman

TSL 1 (best)

Gene LINC01002, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01002-232ENST00000633674 AEBP2Q6ZN18 517 aaPredicted RBP25.46■■□□□ 1.67
LINC01002-232ENST00000633674 CHIC1Q5VXU3 224 aa23.95■■□□□ 1.42
LINC01002-232ENST00000633674 SENP3Q9H4L4 574 aaPredicted RBP21.95■■□□□ 1.1
LINC01002-232ENST00000633674 PHF23Q9BUL5 403 aaPredicted RBP21.52■■□□□ 1.04
LINC01002-232ENST00000633674 FOXD1Q16676 465 aa20.41■□□□□ 0.86
LINC01002-232ENST00000633674 POTEDQ86YR6 584 aa19.62■□□□□ 0.73
LINC01002-232ENST00000633674 MSH5O43196 834 aa19.41■□□□□ 0.7
LINC01002-232ENST00000633674 NISCHQ9Y2I1 1504 aa19.1■□□□□ 0.65
LINC01002-232ENST00000633674 PIAS4Q8N2W9 510 aaPredicted RBP19■□□□□ 0.63
LINC01002-232ENST00000633674 PLPPR3Q6T4P5 718 aa18.87■□□□□ 0.61
LINC01002-232ENST00000633674 PPP6R1Q9UPN7 881 aa18.67■□□□□ 0.58
LINC01002-232ENST00000633674 ADRA2BP18089 450 aa18.58■□□□□ 0.56
LINC01002-232ENST00000633674 DMRT2Q9Y5R5 561 aa17.3■□□□□ 0.36
LINC01002-232ENST00000633674 SCAF1Q9H7N4 1312 aaKnown RBP17.21■□□□□ 0.34
LINC01002-232ENST00000633674 MAPK8IP2Q13387 824 aaPredicted RBP17.18■□□□□ 0.34
LINC01002-232ENST00000633674 ABCC9O60706 1549 aa17.13■□□□□ 0.33
LINC01002-232ENST00000633674 CCDC180Q9P1Z9 1646 aa17.08■□□□□ 0.32
LINC01002-232ENST00000633674 CACNB1Q02641 598 aaPredicted RBP16.87■□□□□ 0.29
LINC01002-232ENST00000633674 DCAF8L1A6NGE4 600 aa16.55■□□□□ 0.24
LINC01002-232ENST00000633674 HOXD11P31277 338 aaPredicted RBP16.49■□□□□ 0.23
LINC01002-232ENST00000633674 RNF39Q9H2S5 420 aa16.46■□□□□ 0.23
LINC01002-232ENST00000633674 PPP4R3CPQ6ZMV5 832 aa16.42■□□□□ 0.22
LINC01002-232ENST00000633674 CNKSR2Q8WXI2 1034 aa16.28■□□□□ 0.2
LINC01002-232ENST00000633674 RB1CC1Q8TDY2 1594 aa16.27■□□□□ 0.2
LINC01002-232ENST00000633674 RNF216Q9NWF9 866 aaPredicted RBP16.26■□□□□ 0.19
LINC01002-232ENST00000633674 C1QBPQ07021 282 aaKnown RBP16.25■□□□□ 0.19
LINC01002-232ENST00000633674 DCAF8L2P0C7V8 631 aa16.23■□□□□ 0.19
LINC01002-232ENST00000633674 NACADO15069 1562 aa16.17■□□□□ 0.18
LINC01002-232ENST00000633674 DNAJC5BQ9UF47 199 aa16.14■□□□□ 0.17
LINC01002-232ENST00000633674 PABPN1Q86U42 306 aaKnown RBP eCLIP16■□□□□ 0.15
LINC01002-232ENST00000633674 MYO15BQ96JP2 1530 aa15.92■□□□□ 0.14
LINC01002-232ENST00000633674 UNC13AQ9UPW8 1703 aa15.89■□□□□ 0.13
LINC01002-232ENST00000633674 ZCCHC6Q5VYS8 1495 aaKnown RBP15.83■□□□□ 0.12
LINC01002-232ENST00000633674 BICRAQ9NZM4 1560 aa15.8■□□□□ 0.12
LINC01002-232ENST00000633674 NCBP3Q53F19 620 aaKnown RBP15.75■□□□□ 0.11
LINC01002-232ENST00000633674 DCAF1Q9Y4B6 1507 aa15.73■□□□□ 0.11
LINC01002-232ENST00000633674 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.69■□□□□ 0.1
LINC01002-232ENST00000633674 SCRIBQ14160 1630 aa15.63■□□□□ 0.09
LINC01002-232ENST00000633674 SHROOM4Q9ULL8 1493 aa15.54■□□□□ 0.08
LINC01002-232ENST00000633674 CC2D2AQ9P2K1 1620 aa15.45■□□□□ 0.06
LINC01002-232ENST00000633674 EIF4G1Q04637 1599 aaKnown RBP15.41■□□□□ 0.06
LINC01002-232ENST00000633674 CECR2Q9BXF3 1484 aa15.41■□□□□ 0.06
LINC01002-232ENST00000633674 NPM3O75607 178 aaKnown RBP15.4■□□□□ 0.06
LINC01002-232ENST00000633674 POTEHQ6S545 545 aa15.31■□□□□ 0.04
LINC01002-232ENST00000633674 U3KPZ7 1027 aaPredicted RBP15.27■□□□□ 0.04
LINC01002-232ENST00000633674 DSG3P32926 999 aa15.23■□□□□ 0.03
LINC01002-232ENST00000633674 CAPN15O75808 1086 aa15.2■□□□□ 0.02
LINC01002-232ENST00000633674 SPINK5Q9NQ38 1064 aaPredicted RBP15.14■□□□□ 0.01
LINC01002-232ENST00000633674 APLP2Q06481 763 aa14.98□□□□□ -0.01
LINC01002-232ENST00000633674 NCAPD3P42695 1498 aa14.94□□□□□ -0.02
LINC01002-232ENST00000633674 ATAD2BQ9ULI0 1458 aa14.91□□□□□ -0.02
LINC01002-232ENST00000633674 SMARCA4P51532 1647 aa14.89□□□□□ -0.03
LINC01002-232ENST00000633674 ZNF219Q9P2Y4 722 aaPredicted RBP14.89□□□□□ -0.03
LINC01002-232ENST00000633674 SMARCA2P51531 1590 aa14.85□□□□□ -0.03
LINC01002-232ENST00000633674 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.83□□□□□ -0.04
LINC01002-232ENST00000633674 HNRNPUL2Q1KMD3 747 aaKnown RBP14.83□□□□□ -0.04
LINC01002-232ENST00000633674 TRHP20396 242 aaPredicted RBP14.82□□□□□ -0.04
LINC01002-232ENST00000633674 BAZ1AQ9NRL2 1556 aaPredicted RBP14.81□□□□□ -0.04
LINC01002-232ENST00000633674 SLC4A2P04920 1241 aa14.81□□□□□ -0.04
LINC01002-232ENST00000633674 HMGXB3Q12766 1538 aa14.81□□□□□ -0.04
LINC01002-232ENST00000633674 ERCC6Q03468 1493 aa14.79□□□□□ -0.04
LINC01002-232ENST00000633674 BAZ1BQ9UIG0 1483 aaKnown RBP14.77□□□□□ -0.04
LINC01002-232ENST00000633674 ABCB7O75027 752 aa14.75□□□□□ -0.05
LINC01002-232ENST00000633674 MROH2BQ7Z745 1585 aa14.74□□□□□ -0.05
LINC01002-232ENST00000633674 NESP48681 1621 aa14.73□□□□□ -0.05
LINC01002-232ENST00000633674 PEG3Q9GZU2 1588 aa14.71□□□□□ -0.05
LINC01002-232ENST00000633674 CUX2O14529 1486 aa14.7□□□□□ -0.06
LINC01002-232ENST00000633674 DNAJC5Q9H3Z4 198 aa14.7□□□□□ -0.06
LINC01002-232ENST00000633674 SAMD1Q6SPF0 538 aaPredicted RBP14.68□□□□□ -0.06
LINC01002-232ENST00000633674 KCNA4P22459 653 aa14.66□□□□□ -0.06
LINC01002-232ENST00000633674 RBM42Q9BTD8 480 aaKnown RBP14.66□□□□□ -0.06
LINC01002-232ENST00000633674 LAMC3Q9Y6N6 1575 aa14.58□□□□□ -0.08
LINC01002-232ENST00000633674 WIZO95785 1651 aa14.56□□□□□ -0.08
LINC01002-232ENST00000633674 PDS5BQ9NTI5 1447 aa14.53□□□□□ -0.08
LINC01002-232ENST00000633674 THOC2Q8NI27 1593 aaKnown RBP14.51□□□□□ -0.09
LINC01002-232ENST00000633674 CADPSQ9ULU8 1353 aa14.5□□□□□ -0.09
LINC01002-232ENST00000633674 KIF21AQ7Z4S6 1674 aa14.5□□□□□ -0.09
LINC01002-232ENST00000633674 RSF1Q96T23 1441 aaPredicted RBP14.45□□□□□ -0.1
LINC01002-232ENST00000633674 CHRDL2Q6WN34 429 aa14.43□□□□□ -0.1
LINC01002-232ENST00000633674 MRC2Q9UBG0 1479 aa14.39□□□□□ -0.11
LINC01002-232ENST00000633674 TOP2AP11388 1531 aaKnown RBP14.36□□□□□ -0.11
LINC01002-232ENST00000633674 CEP164Q9UPV0 1460 aa14.35□□□□□ -0.11
LINC01002-232ENST00000633674 FANCD2Q9BXW9 1451 aa14.34□□□□□ -0.11
LINC01002-232ENST00000633674 POLA2Q14181 598 aa14.34□□□□□ -0.11
LINC01002-232ENST00000633674 WDR62O43379 1518 aa14.34□□□□□ -0.11
LINC01002-232ENST00000633674 CFTRP13569 1480 aa14.33□□□□□ -0.12
LINC01002-232ENST00000633674 MYCNP04198 464 aaPredicted RBP14.33□□□□□ -0.12
LINC01002-232ENST00000633674 CCDC88BA6NC98 1476 aa14.23□□□□□ -0.13
LINC01002-232ENST00000633674 URB2Q14146 1524 aaKnown RBP14.22□□□□□ -0.13
LINC01002-232ENST00000633674 AKT1S1Q96B36 256 aa14.18□□□□□ -0.14
LINC01002-232ENST00000633674 SP7Q8TDD2 431 aaPredicted RBP14.16□□□□□ -0.14
LINC01002-232ENST00000633674 ZBTB12Q9Y330 459 aaPredicted RBP14.15□□□□□ -0.14
LINC01002-232ENST00000633674 PRDM2Q13029 1718 aa14.15□□□□□ -0.14
LINC01002-232ENST00000633674 TRIM41Q8WV44 630 aa14.13□□□□□ -0.15
LINC01002-232ENST00000633674 OSCARQ8IYS5 282 aa14.1□□□□□ -0.15
LINC01002-232ENST00000633674 TOPBP1Q92547 1522 aa14.06□□□□□ -0.16
LINC01002-232ENST00000633674 IFT140Q96RY7 1462 aa14.05□□□□□ -0.16
LINC01002-232ENST00000633674 ZNF608Q9ULD9 1512 aaPredicted RBP14.05□□□□□ -0.16
LINC01002-232ENST00000633674 ABCC8Q09428 1581 aa14.02□□□□□ -0.16
LINC01002-232ENST00000633674 DNMBPQ6XZF7 1577 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms