RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 FGD5Q6ZNL6 1462 aa16.23■□□□□ 0.19
SOX2-OT-244ENST00000627738 EEA1Q15075 1411 aa16.23■□□□□ 0.19
SOX2-OT-244ENST00000627738 MRC2Q9UBG0 1479 aa16.19■□□□□ 0.18
SOX2-OT-244ENST00000627738 ERCC6Q03468 1493 aa16.18■□□□□ 0.18
SOX2-OT-244ENST00000627738 POLA1P09884 1462 aaPredicted RBP16.17■□□□□ 0.18
SOX2-OT-244ENST00000627738 KIF27Q86VH2 1401 aa16.13■□□□□ 0.17
SOX2-OT-244ENST00000627738 RAD54L2Q9Y4B4 1467 aa16.13■□□□□ 0.17
SOX2-OT-244ENST00000627738 CUX2O14529 1486 aa16.12■□□□□ 0.17
SOX2-OT-244ENST00000627738 WDR62O43379 1518 aa16.09■□□□□ 0.17
SOX2-OT-244ENST00000627738 POLA2Q14181 598 aa16.09■□□□□ 0.17
SOX2-OT-244ENST00000627738 ABCA10Q8WWZ4 1543 aa16.08■□□□□ 0.16
SOX2-OT-244ENST00000627738 THOC2Q8NI27 1593 aaKnown RBP16.07■□□□□ 0.16
SOX2-OT-244ENST00000627738 ATXN8OSP0DMR3 200 aa16.05■□□□□ 0.16
SOX2-OT-244ENST00000627738 WDR97A6NE52 1622 aa16.03■□□□□ 0.16
SOX2-OT-244ENST00000627738 KIF21BO75037 1637 aa16.03■□□□□ 0.16
SOX2-OT-244ENST00000627738 GOLGA3Q08378 1498 aa16.03■□□□□ 0.16
SOX2-OT-244ENST00000627738 TARBP1Q13395 1621 aaKnown RBP16.01■□□□□ 0.15
SOX2-OT-244ENST00000627738 IGF1RP08069 1367 aa16■□□□□ 0.15
SOX2-OT-244ENST00000627738 PRXQ9BXM0 1461 aa15.99■□□□□ 0.15
SOX2-OT-244ENST00000627738 TDRD9Q8NDG6 1382 aaKnown RBP15.99■□□□□ 0.15
SOX2-OT-244ENST00000627738 IFT140Q96RY7 1462 aa15.97■□□□□ 0.15
SOX2-OT-244ENST00000627738 RAPGEF2Q9Y4G8 1499 aa15.97■□□□□ 0.15
SOX2-OT-244ENST00000627738 UBTFP17480 764 aaKnown RBP15.97■□□□□ 0.15
SOX2-OT-244ENST00000627738 ABCA5Q8WWZ7 1642 aa15.95■□□□□ 0.14
SOX2-OT-244ENST00000627738 TNIKQ9UKE5 1360 aa15.95■□□□□ 0.14
SOX2-OT-244ENST00000627738 ERICH3Q5RHP9 1530 aa15.94■□□□□ 0.14
SOX2-OT-244ENST00000627738 RBM42Q9BTD8 480 aaKnown RBP15.94■□□□□ 0.14
SOX2-OT-244ENST00000627738 GAPVD1Q14C86 1478 aa15.94■□□□□ 0.14
SOX2-OT-244ENST00000627738 CARMIL1Q5VZK9 1371 aa15.92■□□□□ 0.14
SOX2-OT-244ENST00000627738 ATF5Q9Y2D1 282 aaPredicted RBP15.92■□□□□ 0.14
SOX2-OT-244ENST00000627738 AQRO60306 1485 aaKnown RBP eCLIP15.9■□□□□ 0.14
SOX2-OT-244ENST00000627738 ZNF608Q9ULD9 1512 aaPredicted RBP15.89■□□□□ 0.13
SOX2-OT-244ENST00000627738 CUL7Q14999 1698 aa15.86■□□□□ 0.13
SOX2-OT-244ENST00000627738 CEP162Q5TB80 1403 aa15.85■□□□□ 0.13
SOX2-OT-244ENST00000627738 PBRM1Q86U86 1689 aa15.85■□□□□ 0.13
SOX2-OT-244ENST00000627738 GRIN2BQ13224 1484 aa15.83■□□□□ 0.12
SOX2-OT-244ENST00000627738 EIF4G3O43432 1585 aaKnown RBP15.82■□□□□ 0.12
SOX2-OT-244ENST00000627738 FHAD1B1AJZ9 1412 aa15.77■□□□□ 0.11
SOX2-OT-244ENST00000627738 ADAMTS12P58397 1594 aa15.76■□□□□ 0.11
SOX2-OT-244ENST00000627738 RANGAP1P46060 587 aaPredicted RBP15.76■□□□□ 0.11
SOX2-OT-244ENST00000627738 CLIP1P30622 1438 aa15.76■□□□□ 0.11
SOX2-OT-244ENST00000627738 SNAPC4Q5SXM2 1469 aa15.75■□□□□ 0.11
SOX2-OT-244ENST00000627738 CHRDL2Q6WN34 429 aa15.7■□□□□ 0.1
SOX2-OT-244ENST00000627738 MAGI1Q96QZ7 1491 aaPredicted RBP15.7■□□□□ 0.1
SOX2-OT-244ENST00000627738 CTTNBP2Q8WZ74 1663 aa15.67■□□□□ 0.1
SOX2-OT-244ENST00000627738 ZBTB12Q9Y330 459 aaPredicted RBP15.66■□□□□ 0.1
SOX2-OT-244ENST00000627738 SYNJ2O15056 1496 aa15.65■□□□□ 0.1
SOX2-OT-244ENST00000627738 CHMP7Q8WUX9 453 aaPredicted RBP15.64■□□□□ 0.09
SOX2-OT-244ENST00000627738 ARHGAP35Q9NRY4 1499 aa15.64■□□□□ 0.09
SOX2-OT-244ENST00000627738 GRIN2AQ12879 1464 aa15.63■□□□□ 0.09
SOX2-OT-244ENST00000627738 ARAP1Q96P48 1450 aa15.62■□□□□ 0.09
SOX2-OT-244ENST00000627738 FBLN2P98095 1184 aa15.61■□□□□ 0.09
SOX2-OT-244ENST00000627738 VPS8Q8N3P4 1428 aa15.6■□□□□ 0.09
SOX2-OT-244ENST00000627738 OSCARQ8IYS5 282 aa15.59■□□□□ 0.09
SOX2-OT-244ENST00000627738 EFCAB5A4FU69 1503 aa15.56■□□□□ 0.08
SOX2-OT-244ENST00000627738 IQGAP2Q13576 1575 aa15.55■□□□□ 0.08
SOX2-OT-244ENST00000627738 P3H3Q8IVL6 736 aa15.55■□□□□ 0.08
SOX2-OT-244ENST00000627738 KIAA0586Q9BVV6 1533 aa15.54■□□□□ 0.08
SOX2-OT-244ENST00000627738 AKT1S1Q96B36 256 aa15.54■□□□□ 0.08
SOX2-OT-244ENST00000627738 CEP170Q5SW79 1584 aa15.53■□□□□ 0.08
SOX2-OT-244ENST00000627738 NUP160Q12769 1436 aa15.52■□□□□ 0.08
SOX2-OT-244ENST00000627738 PPARGC1BQ86YN6 1023 aaKnown RBP15.52■□□□□ 0.08
SOX2-OT-244ENST00000627738 SAMD9Q5K651 1589 aa15.52■□□□□ 0.07
SOX2-OT-244ENST00000627738 FHOD3Q2V2M9 1422 aa15.51■□□□□ 0.07
SOX2-OT-244ENST00000627738 CHD1O14646 1710 aa15.5■□□□□ 0.07
SOX2-OT-244ENST00000627738 UGGT2Q9NYU1 1516 aa15.48■□□□□ 0.07
SOX2-OT-244ENST00000627738 REM2Q8IYK8 340 aaPredicted RBP15.45■□□□□ 0.06
SOX2-OT-244ENST00000627738 FKBP8Q14318 412 aa15.44■□□□□ 0.06
SOX2-OT-244ENST00000627738 FMN1Q68DA7 1419 aa15.43■□□□□ 0.06
SOX2-OT-244ENST00000627738 JPH4Q96JJ6 628 aa15.42■□□□□ 0.06
SOX2-OT-244ENST00000627738 DISP1Q96F81 1524 aa15.42■□□□□ 0.06
SOX2-OT-244ENST00000627738 TTBK1Q5TCY1 1321 aaPredicted RBP15.42■□□□□ 0.06
SOX2-OT-244ENST00000627738 TRIM26Q12899 539 aaPredicted RBP15.41■□□□□ 0.06
SOX2-OT-244ENST00000627738 KIAA0556O60303 1618 aa15.41■□□□□ 0.06
SOX2-OT-244ENST00000627738 PCF11O94913 1555 aaKnown RBP15.41■□□□□ 0.06
SOX2-OT-244ENST00000627738 PCGF6Q9BYE7 350 aa15.39■□□□□ 0.05
SOX2-OT-244ENST00000627738 CASKIN1Q8WXD9 1431 aa15.39■□□□□ 0.05
SOX2-OT-244ENST00000627738 ATP1B4Q9UN42 357 aaPredicted RBP15.38■□□□□ 0.05
SOX2-OT-244ENST00000627738 FYCO1Q9BQS8 1478 aa15.37■□□□□ 0.05
SOX2-OT-244ENST00000627738 CARMIL2Q6F5E8 1435 aa15.35■□□□□ 0.05
SOX2-OT-244ENST00000627738 TIAM1Q13009 1591 aa15.33■□□□□ 0.05
SOX2-OT-244ENST00000627738 KANK4Q5T7N3 995 aaPredicted RBP15.33■□□□□ 0.04
SOX2-OT-244ENST00000627738 MAP3K1Q13233 1512 aa15.33■□□□□ 0.04
SOX2-OT-244ENST00000627738 CLASP1Q7Z460 1538 aa15.33■□□□□ 0.04
SOX2-OT-244ENST00000627738 PRG4Q92954 1404 aaPredicted RBP15.32■□□□□ 0.04
SOX2-OT-244ENST00000627738 SHROOM2Q13796 1616 aa15.32■□□□□ 0.04
SOX2-OT-244ENST00000627738 PITPNM1O00562 1244 aa15.3■□□□□ 0.04
SOX2-OT-244ENST00000627738 CFAP43Q8NDM7 1665 aa15.29■□□□□ 0.04
SOX2-OT-244ENST00000627738 PIP4P2Q8N4L2 257 aa15.29■□□□□ 0.04
SOX2-OT-244ENST00000627738 HECW1Q76N89 1606 aa15.27■□□□□ 0.03
SOX2-OT-244ENST00000627738 LRRC9Q6ZRR7 1453 aa15.27■□□□□ 0.03
SOX2-OT-244ENST00000627738 LRRIQ1Q96JM4 1722 aa15.26■□□□□ 0.03
SOX2-OT-244ENST00000627738 RAPGEF6Q8TEU7 1601 aa15.25■□□□□ 0.03
SOX2-OT-244ENST00000627738 ERCC6L2Q5T890 1561 aa15.24■□□□□ 0.03
SOX2-OT-244ENST00000627738 CCDC18Q5T9S5 1454 aa15.23■□□□□ 0.03
SOX2-OT-244ENST00000627738 EPRSP07814 1512 aaKnown RBP15.22■□□□□ 0.03
SOX2-OT-244ENST00000627738 PLB1Q6P1J6 1458 aa15.22■□□□□ 0.03
SOX2-OT-244ENST00000627738 PTPRGP23470 1445 aa15.22■□□□□ 0.03
SOX2-OT-244ENST00000627738 ARID3CA6NKF2 412 aa15.21■□□□□ 0.03
SOX2-OT-244ENST00000627738 NUP153P49790 1475 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms