RNA–Protein interactions for RNA: ENST00000625282.2

SPTAN1-210, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 4,102 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-210ENST00000625282 ERCC6Q03468 1493 aa12.53□□□□□ -0.4
SPTAN1-210ENST00000625282 HNRNPUQ00839 825 aaKnown RBP eCLIP12.51□□□□□ -0.41
SPTAN1-210ENST00000625282 HIRIP3Q9BW71 556 aaPredicted RBP12.5□□□□□ -0.41
SPTAN1-210ENST00000625282 ANP32AP39687 249 aaKnown RBP12.5□□□□□ -0.41
SPTAN1-210ENST00000625282 ARID3CA6NKF2 412 aa12.5□□□□□ -0.41
SPTAN1-210ENST00000625282 CC2D2AQ9P2K1 1620 aa12.49□□□□□ -0.41
SPTAN1-210ENST00000625282 ZBTB47Q9UFB7 747 aaPredicted RBP12.48□□□□□ -0.41
SPTAN1-210ENST00000625282 PAK3O75914 559 aaPredicted RBP12.47□□□□□ -0.41
SPTAN1-210ENST00000625282 B4GALNT3Q6L9W6 998 aa12.46□□□□□ -0.42
SPTAN1-210ENST00000625282 KIF27Q86VH2 1401 aa12.45□□□□□ -0.42
SPTAN1-210ENST00000625282 PDS5BQ9NTI5 1447 aa12.45□□□□□ -0.42
SPTAN1-210ENST00000625282 TNIKQ9UKE5 1360 aa12.44□□□□□ -0.42
SPTAN1-210ENST00000625282 EEA1Q15075 1411 aa12.43□□□□□ -0.42
SPTAN1-210ENST00000625282 NPM2Q86SE8 214 aaKnown RBP12.43□□□□□ -0.42
SPTAN1-210ENST00000625282 CUX2O14529 1486 aa12.42□□□□□ -0.42
SPTAN1-210ENST00000625282 PPP4R2Q9NY27 417 aa12.42□□□□□ -0.42
SPTAN1-210ENST00000625282 CHMP7Q8WUX9 453 aaPredicted RBP12.41□□□□□ -0.42
SPTAN1-210ENST00000625282 DHX57Q6P158 1386 aaKnown RBP12.4□□□□□ -0.42
SPTAN1-210ENST00000625282 FANCD2Q9BXW9 1451 aa12.4□□□□□ -0.42
SPTAN1-210ENST00000625282 TDRD9Q8NDG6 1382 aaKnown RBP12.38□□□□□ -0.43
SPTAN1-210ENST00000625282 GOLGA3Q08378 1498 aa12.38□□□□□ -0.43
SPTAN1-210ENST00000625282 LAS1LQ9Y4W2 734 aaKnown RBP12.38□□□□□ -0.43
SPTAN1-210ENST00000625282 PKNOX2Q96KN3 472 aa12.38□□□□□ -0.43
SPTAN1-210ENST00000625282 NESP48681 1621 aa12.38□□□□□ -0.43
SPTAN1-210ENST00000625282 HMGXB3Q12766 1538 aa12.37□□□□□ -0.43
SPTAN1-210ENST00000625282 NEFMP07197 916 aa12.37□□□□□ -0.43
SPTAN1-210ENST00000625282 CLIP1P30622 1438 aa12.36□□□□□ -0.43
SPTAN1-210ENST00000625282 FAM50AQ14320 339 aaKnown RBP12.36□□□□□ -0.43
SPTAN1-210ENST00000625282 CEP164Q9UPV0 1460 aa12.35□□□□□ -0.43
SPTAN1-210ENST00000625282 RUSC2Q8N2Y8 1516 aa12.35□□□□□ -0.43
SPTAN1-210ENST00000625282 CCER2I3L3R5 266 aa12.35□□□□□ -0.43
SPTAN1-210ENST00000625282 IPO9Q96P70 1041 aaKnown RBP12.34□□□□□ -0.43
SPTAN1-210ENST00000625282 TIMELESSQ9UNS1 1208 aa12.34□□□□□ -0.43
SPTAN1-210ENST00000625282 CARMIL1Q5VZK9 1371 aa12.32□□□□□ -0.44
SPTAN1-210ENST00000625282 CFTRP13569 1480 aa12.31□□□□□ -0.44
SPTAN1-210ENST00000625282 GLIPR1L2Q4G1C9 344 aa12.31□□□□□ -0.44
SPTAN1-210ENST00000625282 PEG3Q9GZU2 1588 aa12.29□□□□□ -0.44
SPTAN1-210ENST00000625282 BRPF3Q9ULD4 1205 aa12.28□□□□□ -0.44
SPTAN1-210ENST00000625282 SIN3AQ96ST3 1273 aa12.27□□□□□ -0.44
SPTAN1-210ENST00000625282 FAM9BQ8IZU0 186 aa12.27□□□□□ -0.45
SPTAN1-210ENST00000625282 CNGB1Q14028 1251 aaPredicted RBP12.26□□□□□ -0.45
SPTAN1-210ENST00000625282 FGD5Q6ZNL6 1462 aa12.24□□□□□ -0.45
SPTAN1-210ENST00000625282 RAD54L2Q9Y4B4 1467 aa12.24□□□□□ -0.45
SPTAN1-210ENST00000625282 PPP1R15AO75807 674 aaPredicted RBP12.24□□□□□ -0.45
SPTAN1-210ENST00000625282 DAXXQ9UER7 740 aaPredicted RBP12.24□□□□□ -0.45
SPTAN1-210ENST00000625282 SYNJ1O43426 1573 aa12.22□□□□□ -0.45
SPTAN1-210ENST00000625282 VSIG10Q8N0Z9 540 aa12.22□□□□□ -0.45
SPTAN1-210ENST00000625282 RAPGEF2Q9Y4G8 1499 aa12.21□□□□□ -0.46
SPTAN1-210ENST00000625282 PPM1GO15355 546 aaPredicted RBP12.19□□□□□ -0.46
SPTAN1-210ENST00000625282 ZNF777Q9ULD5 760 aaPredicted RBP12.18□□□□□ -0.46
SPTAN1-210ENST00000625282 VPS8Q8N3P4 1428 aa12.18□□□□□ -0.46
SPTAN1-210ENST00000625282 RSPH6AQ9H0K4 717 aa12.17□□□□□ -0.46
SPTAN1-210ENST00000625282 CUX1P39880 1505 aa12.16□□□□□ -0.46
SPTAN1-210ENST00000625282 SENP3-EIF4A1A0A087X0R7 540 aa12.16□□□□□ -0.46
SPTAN1-210ENST00000625282 USP35Q9P2H5 1018 aa12.16□□□□□ -0.46
SPTAN1-210ENST00000625282 GSE1Q14687 1217 aa12.15□□□□□ -0.46
SPTAN1-210ENST00000625282 KANK4Q5T7N3 995 aaPredicted RBP12.15□□□□□ -0.46
SPTAN1-210ENST00000625282 IGF1RP08069 1367 aa12.14□□□□□ -0.47
SPTAN1-210ENST00000625282 MRS2Q9HD23 443 aa12.14□□□□□ -0.47
SPTAN1-210ENST00000625282 PODXL2Q9NZ53 605 aa12.14□□□□□ -0.47
SPTAN1-210ENST00000625282 MTUS2Q5JR59 1369 aa12.13□□□□□ -0.47
SPTAN1-210ENST00000625282 AQRO60306 1485 aaKnown RBP eCLIP12.12□□□□□ -0.473e-7■■■□□ 16
SPTAN1-210ENST00000625282 TOPBP1Q92547 1522 aa12.11□□□□□ -0.47
SPTAN1-210ENST00000625282 SLC24A1O60721 1099 aa12.11□□□□□ -0.47
SPTAN1-210ENST00000625282 WASHC2AQ641Q2 1341 aa12.11□□□□□ -0.47
SPTAN1-210ENST00000625282 PLEKHG5O94827 1062 aa12.1□□□□□ -0.47
SPTAN1-210ENST00000625282 GAPVD1Q14C86 1478 aa12.1□□□□□ -0.47
SPTAN1-210ENST00000625282 RAB3GAP2Q9H2M9 1393 aa12.1□□□□□ -0.47
SPTAN1-210ENST00000625282 ZMYND15Q9H091 742 aa12.09□□□□□ -0.47
SPTAN1-210ENST00000625282 C11orf95C9JLR9 678 aaPredicted RBP12.09□□□□□ -0.47
SPTAN1-210ENST00000625282 POLA1P09884 1462 aaPredicted RBP12.09□□□□□ -0.47
SPTAN1-210ENST00000625282 TOP2BQ02880 1626 aa12.08□□□□□ -0.47
SPTAN1-210ENST00000625282 TONSLQ96HA7 1378 aa12.08□□□□□ -0.48
SPTAN1-210ENST00000625282 NAP1L5Q96NT1 182 aaPredicted RBP12.08□□□□□ -0.48
SPTAN1-210ENST00000625282 ARXQ96QS3 562 aa12.08□□□□□ -0.48
SPTAN1-210ENST00000625282 FRAT1Q92837 279 aaPredicted RBP12.07□□□□□ -0.48
SPTAN1-210ENST00000625282 MRC2Q9UBG0 1479 aa12.07□□□□□ -0.48
SPTAN1-210ENST00000625282 LAMC3Q9Y6N6 1575 aa12.06□□□□□ -0.48
SPTAN1-210ENST00000625282 CHIC2Q9UKJ5 165 aa12.06□□□□□ -0.48
SPTAN1-210ENST00000625282 CCNB3Q8WWL7 1395 aa12.06□□□□□ -0.48
SPTAN1-210ENST00000625282 WDR97A6NE52 1622 aa12.06□□□□□ -0.48
SPTAN1-210ENST00000625282 NPM1P06748 294 aaKnown RBP eCLIP12.05□□□□□ -0.48
SPTAN1-210ENST00000625282 POLR3GLQ9BT43 218 aa12.05□□□□□ -0.48
SPTAN1-210ENST00000625282 WASHC2CQ9Y4E1 1318 aa12.04□□□□□ -0.48
SPTAN1-210ENST00000625282 FHOD3Q2V2M9 1422 aa12.04□□□□□ -0.48
SPTAN1-210ENST00000625282 SLC4A3P48751 1232 aa12.04□□□□□ -0.48
SPTAN1-210ENST00000625282 NFKBIBQ15653 356 aa12.02□□□□□ -0.48
SPTAN1-210ENST00000625282 CCDC184Q52MB2 194 aa12.02□□□□□ -0.48
SPTAN1-210ENST00000625282 HSP90AA2PQ14568 343 aaPredicted RBP12.02□□□□□ -0.49
SPTAN1-210ENST00000625282 DNMBPQ6XZF7 1577 aa12.02□□□□□ -0.49
SPTAN1-210ENST00000625282 PDE4AP27815 886 aa12.02□□□□□ -0.49
SPTAN1-210ENST00000625282 DDRGK1Q96HY6 314 aa12.01□□□□□ -0.49
SPTAN1-210ENST00000625282 PLEKHD1A6NEE1 506 aa12.01□□□□□ -0.49
SPTAN1-210ENST00000625282 FHAD1B1AJZ9 1412 aa12.01□□□□□ -0.49
SPTAN1-210ENST00000625282 URB2Q14146 1524 aaKnown RBP12□□□□□ -0.49
SPTAN1-210ENST00000625282 JPH4Q96JJ6 628 aa12□□□□□ -0.49
SPTAN1-210ENST00000625282 FAM43AQ8N2R8 423 aa11.99□□□□□ -0.49
SPTAN1-210ENST00000625282 HSP90AA1P07900 732 aaKnown RBP11.98□□□□□ -0.49
SPTAN1-210ENST00000625282 ARID4BQ4LE39 1312 aaPredicted RBP11.98□□□□□ -0.49
SPTAN1-210ENST00000625282 ZBED9Q6R2W3 1325 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms