RNA–Protein interactions for RNA: ENST00000625282.2

SPTAN1-210, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 4,102 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-210ENST00000625282 NISCHQ9Y2I1 1504 aa16.78■□□□□ 0.28
SPTAN1-210ENST00000625282 DCAF8L2P0C7V8 631 aa15.48■□□□□ 0.07
SPTAN1-210ENST00000625282 PELP1Q8IZL8 1130 aaKnown RBP15.25■□□□□ 0.03
SPTAN1-210ENST00000625282 HRCP23327 699 aa15.18■□□□□ 0.02
SPTAN1-210ENST00000625282 PPARGC1BQ86YN6 1023 aaKnown RBP15□□□□□ -0.01
SPTAN1-210ENST00000625282 PCGF6Q9BYE7 350 aa14.95□□□□□ -0.02
SPTAN1-210ENST00000625282 SHROOM4Q9ULL8 1493 aa14.83□□□□□ -0.04
SPTAN1-210ENST00000625282 MYT1Q01538 1121 aa14.78□□□□□ -0.04
SPTAN1-210ENST00000625282 SUPT5HO00267 1087 aaKnown RBP14.68□□□□□ -0.06
SPTAN1-210ENST00000625282 SCAF1Q9H7N4 1312 aaKnown RBP14.57□□□□□ -0.08
SPTAN1-210ENST00000625282 ABCC9O60706 1549 aa14.35□□□□□ -0.11
SPTAN1-210ENST00000625282 ZEB1P37275 1124 aaPredicted RBP14.23□□□□□ -0.13
SPTAN1-210ENST00000625282 CHIC1Q5VXU3 224 aa14.22□□□□□ -0.13
SPTAN1-210ENST00000625282 TRIM26Q12899 539 aaPredicted RBP14.2□□□□□ -0.14
SPTAN1-210ENST00000625282 GTF3C3Q9Y5Q9 886 aa14.18□□□□□ -0.14
SPTAN1-210ENST00000625282 MYO15BQ96JP2 1530 aa14.17□□□□□ -0.14
SPTAN1-210ENST00000625282 CCDC180Q9P1Z9 1646 aa14.17□□□□□ -0.14
SPTAN1-210ENST00000625282 ACIN1Q9UKV3 1341 aaKnown RBP14.16□□□□□ -0.14
SPTAN1-210ENST00000625282 CENPBP07199 599 aaPredicted RBP14.13□□□□□ -0.15
SPTAN1-210ENST00000625282 NEUROD1Q13562 356 aa14.11□□□□□ -0.15
SPTAN1-210ENST00000625282 LOC105371045A0A1W2PR82 267 aa14.11□□□□□ -0.15
SPTAN1-210ENST00000625282 ZCCHC6Q5VYS8 1495 aaKnown RBP13.98□□□□□ -0.17
SPTAN1-210ENST00000625282 DCAF1Q9Y4B6 1507 aa13.93□□□□□ -0.18
SPTAN1-210ENST00000625282 YTHDC1Q96MU7 727 aaKnown RBP13.9□□□□□ -0.18
SPTAN1-210ENST00000625282 PABPN1Q86U42 306 aaKnown RBP eCLIP13.88□□□□□ -0.19
SPTAN1-210ENST00000625282 TTBK1Q5TCY1 1321 aaPredicted RBP13.84□□□□□ -0.19
SPTAN1-210ENST00000625282 DIEXFQ68CQ4 756 aaKnown RBP13.83□□□□□ -0.19
SPTAN1-210ENST00000625282 EHMT2Q96KQ7 1210 aa13.8□□□□□ -0.2
SPTAN1-210ENST00000625282 BCL11AQ9H165 835 aa13.8□□□□□ -0.2
SPTAN1-210ENST00000625282 CCER1Q8TC90 406 aaPredicted RBP13.79□□□□□ -0.2
SPTAN1-210ENST00000625282 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.72□□□□□ -0.21
SPTAN1-210ENST00000625282 SCRIBQ14160 1630 aa13.71□□□□□ -0.21
SPTAN1-210ENST00000625282 FAM9AQ8IZU1 332 aaPredicted RBP13.66□□□□□ -0.22
SPTAN1-210ENST00000625282 ANP32EQ9BTT0 268 aa13.56□□□□□ -0.24
SPTAN1-210ENST00000625282 RB1CC1Q8TDY2 1594 aa13.54□□□□□ -0.24
SPTAN1-210ENST00000625282 NACADO15069 1562 aa13.52□□□□□ -0.24
SPTAN1-210ENST00000625282 TRIM41Q8WV44 630 aa13.49□□□□□ -0.25
SPTAN1-210ENST00000625282 CSRNP3Q8WYN3 585 aa13.45□□□□□ -0.26
SPTAN1-210ENST00000625282 PRKCSHP14314 528 aaPredicted RBP13.42□□□□□ -0.26
SPTAN1-210ENST00000625282 ZNF316A6NFI3 1004 aaPredicted RBP13.41□□□□□ -0.26
SPTAN1-210ENST00000625282 MIER1Q8N108 512 aa13.39□□□□□ -0.27
SPTAN1-210ENST00000625282 TSHZ2Q9NRE2 1034 aa13.3□□□□□ -0.28
SPTAN1-210ENST00000625282 SUPT16HQ9Y5B9 1047 aaKnown RBP13.29□□□□□ -0.28
SPTAN1-210ENST00000625282 BCANQ96GW7 911 aa13.28□□□□□ -0.28
SPTAN1-210ENST00000625282 ERICH6Q7L0X2 663 aa13.26□□□□□ -0.29
SPTAN1-210ENST00000625282 RANGAP1P46060 587 aaPredicted RBP13.24□□□□□ -0.29
SPTAN1-210ENST00000625282 CECR2Q9BXF3 1484 aa13.23□□□□□ -0.29
SPTAN1-210ENST00000625282 RSF1Q96T23 1441 aaPredicted RBP13.22□□□□□ -0.29
SPTAN1-210ENST00000625282 CLSPNQ9HAW4 1339 aa13.16□□□□□ -0.3
SPTAN1-210ENST00000625282 UBTFP17480 764 aaKnown RBP13.13□□□□□ -0.31
SPTAN1-210ENST00000625282 NEFLP07196 543 aa13.07□□□□□ -0.32
SPTAN1-210ENST00000625282 HNRNPUL2Q1KMD3 747 aaKnown RBP13.06□□□□□ -0.32
SPTAN1-210ENST00000625282 MROH2BQ7Z745 1585 aa13.05□□□□□ -0.32
SPTAN1-210ENST00000625282 FKBP8Q14318 412 aa13.05□□□□□ -0.32
SPTAN1-210ENST00000625282 BAZ1AQ9NRL2 1556 aaPredicted RBP13.04□□□□□ -0.32
SPTAN1-210ENST00000625282 RBM19Q9Y4C8 960 aaKnown RBP13.03□□□□□ -0.32
SPTAN1-210ENST00000625282 APLP2Q06481 763 aa12.99□□□□□ -0.33
SPTAN1-210ENST00000625282 ITGAEP38570 1179 aa12.98□□□□□ -0.33
SPTAN1-210ENST00000625282 BAZ1BQ9UIG0 1483 aaKnown RBP12.96□□□□□ -0.33
SPTAN1-210ENST00000625282 ANO8Q9HCE9 1232 aaPredicted RBP12.95□□□□□ -0.34
SPTAN1-210ENST00000625282 ATP1B4Q9UN42 357 aaPredicted RBP12.93□□□□□ -0.34
SPTAN1-210ENST00000625282 DEKP35659 375 aaKnown RBP12.89□□□□□ -0.35
SPTAN1-210ENST00000625282 WIZO95785 1651 aa12.87□□□□□ -0.35
SPTAN1-210ENST00000625282 DNAJC5BQ9UF47 199 aa12.87□□□□□ -0.35
SPTAN1-210ENST00000625282 CCDC136Q96JN2 1154 aa12.84□□□□□ -0.35
SPTAN1-210ENST00000625282 NBR1Q14596 966 aa12.83□□□□□ -0.36
SPTAN1-210ENST00000625282 MSH5O43196 834 aa12.82□□□□□ -0.36
SPTAN1-210ENST00000625282 MYT1LQ9UL68 1186 aa12.82□□□□□ -0.36
SPTAN1-210ENST00000625282 CDK11AQ9UQ88 783 aaPredicted RBP12.82□□□□□ -0.36
SPTAN1-210ENST00000625282 SMARCA4P51532 1647 aa12.8□□□□□ -0.36
SPTAN1-210ENST00000625282 CCDC88BA6NC98 1476 aa12.79□□□□□ -0.36
SPTAN1-210ENST00000625282 KCNH8Q96L42 1107 aa12.78□□□□□ -0.36
SPTAN1-210ENST00000625282 RTN4Q9NQC3 1192 aaKnown RBP12.78□□□□□ -0.36
SPTAN1-210ENST00000625282 ATAD2BQ9ULI0 1458 aa12.77□□□□□ -0.36
SPTAN1-210ENST00000625282 SALL2Q9Y467 1007 aaPredicted RBP12.77□□□□□ -0.36
SPTAN1-210ENST00000625282 SMARCA2P51531 1590 aa12.76□□□□□ -0.37
SPTAN1-210ENST00000625282 TRIM52Q96A61 297 aa12.75□□□□□ -0.37
SPTAN1-210ENST00000625282 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.74□□□□□ -0.37
SPTAN1-210ENST00000625282 RTL5Q5HYW3 569 aaPredicted RBP12.74□□□□□ -0.37
SPTAN1-210ENST00000625282 BICRAQ9NZM4 1560 aa12.72□□□□□ -0.37
SPTAN1-210ENST00000625282 TOP2AP11388 1531 aaKnown RBP12.71□□□□□ -0.37
SPTAN1-210ENST00000625282 IRX6P78412 446 aaPredicted RBP12.71□□□□□ -0.38
SPTAN1-210ENST00000625282 EIF5BO60841 1220 aaKnown RBP12.7□□□□□ -0.38
SPTAN1-210ENST00000625282 FBLN2P98095 1184 aa12.7□□□□□ -0.38
SPTAN1-210ENST00000625282 WRNQ14191 1432 aaPredicted RBP eCLIP12.69□□□□□ -0.38
SPTAN1-210ENST00000625282 EIF4G1Q04637 1599 aaKnown RBP12.66□□□□□ -0.38
SPTAN1-210ENST00000625282 FANCIQ9NVI1 1328 aa12.66□□□□□ -0.38
SPTAN1-210ENST00000625282 DDX10Q13206 875 aaKnown RBP12.65□□□□□ -0.38
SPTAN1-210ENST00000625282 ABCC8Q09428 1581 aa12.63□□□□□ -0.39
SPTAN1-210ENST00000625282 CEP162Q5TB80 1403 aa12.62□□□□□ -0.39
SPTAN1-210ENST00000625282 UNC13AQ9UPW8 1703 aa12.62□□□□□ -0.39
SPTAN1-210ENST00000625282 P3H3Q8IVL6 736 aa12.61□□□□□ -0.39
SPTAN1-210ENST00000625282 ERICH6BQ5W0A0 696 aa12.6□□□□□ -0.39
SPTAN1-210ENST00000625282 NOP58Q9Y2X3 529 aaKnown RBP12.58□□□□□ -0.4
SPTAN1-210ENST00000625282 IL27Q8NEV9 243 aa12.58□□□□□ -0.4
SPTAN1-210ENST00000625282 NCAPD3P42695 1498 aa12.55□□□□□ -0.4
SPTAN1-210ENST00000625282 ANP32CO43423 234 aa12.55□□□□□ -0.4
SPTAN1-210ENST00000625282 CADPSQ9ULU8 1353 aa12.55□□□□□ -0.4
SPTAN1-210ENST00000625282 SOGA1O94964 1423 aa12.53□□□□□ -0.4
SPTAN1-210ENST00000625282 UBE2Q2Q8WVN8 375 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms