RNA–Protein interactions for RNA: ENST00000621198.4

SYN2-206, Transcript of synapsin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYN2, Length 2,674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN2-206ENST00000621198 FANCD2Q9BXW9 1451 aa27.56■■■□□ 2
SYN2-206ENST00000621198 CC2D2AQ9P2K1 1620 aa27.55■■■□□ 2
SYN2-206ENST00000621198 RAD54L2Q9Y4B4 1467 aa27.53■■■□□ 2
SYN2-206ENST00000621198 MAP3K1Q13233 1512 aa27.5■■□□□ 1.99
SYN2-206ENST00000621198 MAPKBP1O60336 1514 aa27.48■■□□□ 1.99
SYN2-206ENST00000621198 FHOD3Q2V2M9 1422 aa27.48■■□□□ 1.99
SYN2-206ENST00000621198 FHAD1B1AJZ9 1412 aa27.48■■□□□ 1.99
SYN2-206ENST00000621198 PCF11O94913 1555 aaKnown RBP27.48■■□□□ 1.99
SYN2-206ENST00000621198 SETD5Q9C0A6 1442 aa27.47■■□□□ 1.99
SYN2-206ENST00000621198 SIN3AQ96ST3 1273 aa27.43■■□□□ 1.98
SYN2-206ENST00000621198 NESP48681 1621 aa27.42■■□□□ 1.98
SYN2-206ENST00000621198 POLA1P09884 1462 aaPredicted RBP27.39■■□□□ 1.98
SYN2-206ENST00000621198 DNMBPQ6XZF7 1577 aa27.38■■□□□ 1.97
SYN2-206ENST00000621198 CFAP43Q8NDM7 1665 aa27.37■■□□□ 1.97
SYN2-206ENST00000621198 TOPBP1Q92547 1522 aa27.37■■□□□ 1.97
SYN2-206ENST00000621198 ABCA10Q8WWZ4 1543 aa27.35■■□□□ 1.97
SYN2-206ENST00000621198 KCNH8Q96L42 1107 aa27.31■■□□□ 1.96
SYN2-206ENST00000621198 WDR97A6NE52 1622 aa27.28■■□□□ 1.96
SYN2-206ENST00000621198 FYCO1Q9BQS8 1478 aa27.27■■□□□ 1.96
SYN2-206ENST00000621198 CASKIN1Q8WXD9 1431 aa27.26■■□□□ 1.95
SYN2-206ENST00000621198 EFCAB5A4FU69 1503 aa27.23■■□□□ 1.95
SYN2-206ENST00000621198 DDX10Q13206 875 aaKnown RBP27.23■■□□□ 1.95
SYN2-206ENST00000621198 HIRIP3Q9BW71 556 aaPredicted RBP27.23■■□□□ 1.95
SYN2-206ENST00000621198 SUPT16HQ9Y5B9 1047 aaKnown RBP27.21■■□□□ 1.95
SYN2-206ENST00000621198 CUL7Q14999 1698 aa27.2■■□□□ 1.94
SYN2-206ENST00000621198 TDRD9Q8NDG6 1382 aaKnown RBP27.2■■□□□ 1.94
SYN2-206ENST00000621198 CTTNBP2Q8WZ74 1663 aa27.19■■□□□ 1.94
SYN2-206ENST00000621198 MTUS2Q5JR59 1369 aa27.15■■□□□ 1.94
SYN2-206ENST00000621198 URB2Q14146 1524 aaKnown RBP27.15■■□□□ 1.94
SYN2-206ENST00000621198 AQRO60306 1485 aaKnown RBP eCLIP27.15■■□□□ 1.94
SYN2-206ENST00000621198 FMN1Q68DA7 1419 aa27.14■■□□□ 1.94
SYN2-206ENST00000621198 FGD6Q6ZV73 1430 aa27.13■■□□□ 1.93
SYN2-206ENST00000621198 SNAPC4Q5SXM2 1469 aa27.1■■□□□ 1.93
SYN2-206ENST00000621198 PPP1R15AO75807 674 aaPredicted RBP27.07■■□□□ 1.92
SYN2-206ENST00000621198 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.06■■□□□ 1.92
SYN2-206ENST00000621198 PTPRKQ15262 1439 aa27.04■■□□□ 1.92
SYN2-206ENST00000621198 DNAJC5BQ9UF47 199 aa27.03■■□□□ 1.92
SYN2-206ENST00000621198 GAPVD1Q14C86 1478 aa27.03■■□□□ 1.92
SYN2-206ENST00000621198 CCDC18Q5T9S5 1454 aa27.03■■□□□ 1.92
SYN2-206ENST00000621198 TIMELESSQ9UNS1 1208 aa27.03■■□□□ 1.92
SYN2-206ENST00000621198 LAMC3Q9Y6N6 1575 aa27■■□□□ 1.91
SYN2-206ENST00000621198 TONSLQ96HA7 1378 aa27■■□□□ 1.91
SYN2-206ENST00000621198 ABCA5Q8WWZ7 1642 aa26.99■■□□□ 1.91
SYN2-206ENST00000621198 LRRIQ1Q96JM4 1722 aa26.99■■□□□ 1.91
SYN2-206ENST00000621198 NCOA2Q15596 1464 aa26.98■■□□□ 1.91
SYN2-206ENST00000621198 SAMD9Q5K651 1589 aa26.97■■□□□ 1.91
SYN2-206ENST00000621198 HFM1A2PYH4 1435 aa26.94■■□□□ 1.9
SYN2-206ENST00000621198 GRIN2BQ13224 1484 aa26.93■■□□□ 1.9
SYN2-206ENST00000621198 MYOM3Q5VTT5 1437 aa26.93■■□□□ 1.9
SYN2-206ENST00000621198 PTPN23Q9H3S7 1636 aa26.92■■□□□ 1.9
SYN2-206ENST00000621198 UACAQ9BZF9 1416 aa26.91■■□□□ 1.9
SYN2-206ENST00000621198 BCANQ96GW7 911 aa26.9■■□□□ 1.9
SYN2-206ENST00000621198 PDS5BQ9NTI5 1447 aa26.9■■□□□ 1.9
SYN2-206ENST00000621198 CHIC2Q9UKJ5 165 aa26.9■■□□□ 1.9
SYN2-206ENST00000621198 NAIPQ13075 1403 aa26.89■■□□□ 1.89
SYN2-206ENST00000621198 ARID3CA6NKF2 412 aa26.89■■□□□ 1.89
SYN2-206ENST00000621198 RRP7BPQ9NSQ0 103 aa26.88■■□□□ 1.89
SYN2-206ENST00000621198 ANP32CO43423 234 aa26.88■■□□□ 1.89
SYN2-206ENST00000621198 SUPT6HQ7KZ85 1726 aaKnown RBP26.86■■□□□ 1.89
SYN2-206ENST00000621198 TRIM52Q96A61 297 aa26.85■■□□□ 1.89
SYN2-206ENST00000621198 KIF21AQ7Z4S6 1674 aa26.84■■□□□ 1.89
SYN2-206ENST00000621198 MAGI3Q5TCQ9 1506 aa26.83■■□□□ 1.89
SYN2-206ENST00000621198 EHBP1L1Q8N3D4 1523 aa26.83■■□□□ 1.89
SYN2-206ENST00000621198 FKBP8Q14318 412 aa26.8■■□□□ 1.88
SYN2-206ENST00000621198 THOC2Q8NI27 1593 aaKnown RBP26.78■■□□□ 1.88
SYN2-206ENST00000621198 UGGT2Q9NYU1 1516 aa26.78■■□□□ 1.88
SYN2-206ENST00000621198 CCER2I3L3R5 266 aa26.75■■□□□ 1.87
SYN2-206ENST00000621198 TSHZ2Q9NRE2 1034 aa26.75■■□□□ 1.87
SYN2-206ENST00000621198 TARBP1Q13395 1621 aaKnown RBP26.75■■□□□ 1.87
SYN2-206ENST00000621198 MYT1Q01538 1121 aa26.7■■□□□ 1.86
SYN2-206ENST00000621198 CDK13Q14004 1512 aaKnown RBP26.7■■□□□ 1.86
SYN2-206ENST00000621198 ARHGEF11O15085 1522 aa26.69■■□□□ 1.86
SYN2-206ENST00000621198 HECW1Q76N89 1606 aa26.66■■□□□ 1.86
SYN2-206ENST00000621198 EPRSP07814 1512 aaKnown RBP26.66■■□□□ 1.86
SYN2-206ENST00000621198 KDM5BQ9UGL1 1544 aa26.66■■□□□ 1.86
SYN2-206ENST00000621198 PBRM1Q86U86 1689 aa26.66■■□□□ 1.86
SYN2-206ENST00000621198 IQGAP2Q13576 1575 aa26.65■■□□□ 1.86
SYN2-206ENST00000621198 FOXD1Q16676 465 aa26.65■■□□□ 1.86
SYN2-206ENST00000621198 KDM6BO15054 1643 aa26.64■■□□□ 1.86
SYN2-206ENST00000621198 NEFLP07196 543 aa26.63■■□□□ 1.85
SYN2-206ENST00000621198 TCOF1Q13428 1488 aaKnown RBP26.62■■□□□ 1.85
SYN2-206ENST00000621198 DENND4BO75064 1496 aaPredicted RBP26.61■■□□□ 1.85
SYN2-206ENST00000621198 HSPA5P11021 654 aaKnown RBP26.61■■□□□ 1.85
SYN2-206ENST00000621198 MPHOSPH9Q99550 1183 aa26.58■■□□□ 1.85
SYN2-206ENST00000621198 ADAMTS12P58397 1594 aa26.58■■□□□ 1.85
SYN2-206ENST00000621198 GCC2Q8IWJ2 1684 aa26.57■■□□□ 1.84
SYN2-206ENST00000621198 WASHC2AQ641Q2 1341 aa26.56■■□□□ 1.84
SYN2-206ENST00000621198 WDR62O43379 1518 aa26.54■■□□□ 1.84
SYN2-206ENST00000621198 L3MBTL2Q969R5 705 aa26.52■■□□□ 1.84
SYN2-206ENST00000621198 HNRNPUQ00839 825 aaKnown RBP eCLIP26.51■■□□□ 1.83
SYN2-206ENST00000621198 MIA2Q96PC5 1412 aa26.5■■□□□ 1.83
SYN2-206ENST00000621198 ZNF644Q9H582 1327 aaPredicted RBP26.5■■□□□ 1.83
SYN2-206ENST00000621198 EIF4G2P78344 907 aaKnown RBP eCLIP26.5■■□□□ 1.83
SYN2-206ENST00000621198 ZNF608Q9ULD9 1512 aaPredicted RBP26.49■■□□□ 1.83
SYN2-206ENST00000621198 MRC2Q9UBG0 1479 aa26.48■■□□□ 1.83
SYN2-206ENST00000621198 AKNAQ7Z591 1439 aa26.47■■□□□ 1.83
SYN2-206ENST00000621198 DAPK1P53355 1430 aa26.42■■□□□ 1.82
SYN2-206ENST00000621198 C11orf95C9JLR9 678 aaPredicted RBP26.41■■□□□ 1.82
SYN2-206ENST00000621198 IRX6P78412 446 aaPredicted RBP26.38■■□□□ 1.81
SYN2-206ENST00000621198 SLC4A1APQ9BWU0 796 aaKnown RBP26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms