RNA–Protein interactions for RNA: ENST00000620652.4

AP3B2-215, Transcript of adaptor related protein complex 3 subunit beta 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene AP3B2, Length 3,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B2-215ENST00000620652 NEFLP07196 543 aa14.63□□□□□ -0.07
AP3B2-215ENST00000620652 THOC2Q8NI27 1593 aaKnown RBP14.62□□□□□ -0.07
AP3B2-215ENST00000620652 FANCD2Q9BXW9 1451 aa14.62□□□□□ -0.07
AP3B2-215ENST00000620652 PODXL2Q9NZ53 605 aa14.61□□□□□ -0.07
AP3B2-215ENST00000620652 EEA1Q15075 1411 aa14.59□□□□□ -0.07
AP3B2-215ENST00000620652 DAXXQ9UER7 740 aaPredicted RBP14.58□□□□□ -0.08
AP3B2-215ENST00000620652 PDS5BQ9NTI5 1447 aa14.56□□□□□ -0.08
AP3B2-215ENST00000620652 CUX1P39880 1505 aa14.54□□□□□ -0.08
AP3B2-215ENST00000620652 CEP162Q5TB80 1403 aa14.54□□□□□ -0.08
AP3B2-215ENST00000620652 ATP1B4Q9UN42 357 aaPredicted RBP14.53□□□□□ -0.08
AP3B2-215ENST00000620652 CEP164Q9UPV0 1460 aa14.52□□□□□ -0.09
AP3B2-215ENST00000620652 TOP2BQ02880 1626 aa14.51□□□□□ -0.09
AP3B2-215ENST00000620652 KCNH8Q96L42 1107 aa14.51□□□□□ -0.09
AP3B2-215ENST00000620652 KIF27Q86VH2 1401 aa14.51□□□□□ -0.09
AP3B2-215ENST00000620652 ERCC6Q03468 1493 aa14.5□□□□□ -0.09
AP3B2-215ENST00000620652 CDK11AQ9UQ88 783 aaPredicted RBP14.5□□□□□ -0.09
AP3B2-215ENST00000620652 CUX2O14529 1486 aa14.49□□□□□ -0.09
AP3B2-215ENST00000620652 RTL5Q5HYW3 569 aaPredicted RBP14.47□□□□□ -0.09
AP3B2-215ENST00000620652 WDR62O43379 1518 aa14.47□□□□□ -0.09
AP3B2-215ENST00000620652 GOLGA3Q08378 1498 aa14.47□□□□□ -0.09
AP3B2-215ENST00000620652 FGD5Q6ZNL6 1462 aa14.46□□□□□ -0.09
AP3B2-215ENST00000620652 P3H3Q8IVL6 736 aa14.44□□□□□ -0.1
AP3B2-215ENST00000620652 TNIKQ9UKE5 1360 aa14.43□□□□□ -0.1
AP3B2-215ENST00000620652 MRC2Q9UBG0 1479 aa14.41□□□□□ -0.1
AP3B2-215ENST00000620652 RAD54L2Q9Y4B4 1467 aa14.41□□□□□ -0.1
AP3B2-215ENST00000620652 NOP58Q9Y2X3 529 aaKnown RBP14.41□□□□□ -0.1
AP3B2-215ENST00000620652 TIMELESSQ9UNS1 1208 aa14.41□□□□□ -0.1
AP3B2-215ENST00000620652 BIVM-ERCC5R4GMW8 1640 aa14.4□□□□□ -0.1
AP3B2-215ENST00000620652 TOPBP1Q92547 1522 aa14.4□□□□□ -0.1
AP3B2-215ENST00000620652 TDRD9Q8NDG6 1382 aaKnown RBP14.39□□□□□ -0.11
AP3B2-215ENST00000620652 RAPGEF2Q9Y4G8 1499 aa14.39□□□□□ -0.11
AP3B2-215ENST00000620652 PAK3O75914 559 aaPredicted RBP14.39□□□□□ -0.11
AP3B2-215ENST00000620652 URB2Q14146 1524 aaKnown RBP14.37□□□□□ -0.11
AP3B2-215ENST00000620652 POLA1P09884 1462 aaPredicted RBP14.36□□□□□ -0.11
AP3B2-215ENST00000620652 DNMBPQ6XZF7 1577 aa14.35□□□□□ -0.11
AP3B2-215ENST00000620652 CARMIL1Q5VZK9 1371 aa14.35□□□□□ -0.11
AP3B2-215ENST00000620652 IGF1RP08069 1367 aa14.34□□□□□ -0.11
AP3B2-215ENST00000620652 CLIP1P30622 1438 aa14.33□□□□□ -0.12
AP3B2-215ENST00000620652 IRX6P78412 446 aaPredicted RBP14.33□□□□□ -0.12
AP3B2-215ENST00000620652 TRIM52Q96A61 297 aa14.32□□□□□ -0.12
AP3B2-215ENST00000620652 VSIG10Q8N0Z9 540 aa14.31□□□□□ -0.12
AP3B2-215ENST00000620652 ZMYND15Q9H091 742 aa14.31□□□□□ -0.12
AP3B2-215ENST00000620652 GLIPR1L2Q4G1C9 344 aa14.29□□□□□ -0.12
AP3B2-215ENST00000620652 KANK4Q5T7N3 995 aaPredicted RBP14.29□□□□□ -0.12
AP3B2-215ENST00000620652 FBLN2P98095 1184 aa14.28□□□□□ -0.12
AP3B2-215ENST00000620652 PRXQ9BXM0 1461 aa14.26□□□□□ -0.13
AP3B2-215ENST00000620652 KIF21BO75037 1637 aa14.25□□□□□ -0.13
AP3B2-215ENST00000620652 BRPF3Q9ULD4 1205 aa14.24□□□□□ -0.13
AP3B2-215ENST00000620652 ABCA10Q8WWZ4 1543 aa14.23□□□□□ -0.13
AP3B2-215ENST00000620652 A0A0U1RQG5 324 aaPredicted RBP14.22□□□□□ -0.13
AP3B2-215ENST00000620652 ARID3CA6NKF2 412 aa14.22□□□□□ -0.13
AP3B2-215ENST00000620652 GAPVD1Q14C86 1478 aa14.22□□□□□ -0.13
AP3B2-215ENST00000620652 AQRO60306 1485 aaKnown RBP eCLIP14.21□□□□□ -0.13
AP3B2-215ENST00000620652 TARBP1Q13395 1621 aaKnown RBP14.21□□□□□ -0.14
AP3B2-215ENST00000620652 ERICH3Q5RHP9 1530 aa14.17□□□□□ -0.14
AP3B2-215ENST00000620652 ZBTB47Q9UFB7 747 aaPredicted RBP14.17□□□□□ -0.14
AP3B2-215ENST00000620652 WDR97A6NE52 1622 aa14.17□□□□□ -0.14
AP3B2-215ENST00000620652 FAM50AQ14320 339 aaKnown RBP14.16□□□□□ -0.14
AP3B2-215ENST00000620652 CHMP7Q8WUX9 453 aaPredicted RBP14.16□□□□□ -0.14
AP3B2-215ENST00000620652 RSPH6AQ9H0K4 717 aa14.15□□□□□ -0.14
AP3B2-215ENST00000620652 ANP32AP39687 249 aaKnown RBP14.14□□□□□ -0.15
AP3B2-215ENST00000620652 NEFMP07197 916 aa14.13□□□□□ -0.15
AP3B2-215ENST00000620652 IFT140Q96RY7 1462 aa14.12□□□□□ -0.15
AP3B2-215ENST00000620652 VPS8Q8N3P4 1428 aa14.12□□□□□ -0.15
AP3B2-215ENST00000620652 C11orf95C9JLR9 678 aaPredicted RBP14.11□□□□□ -0.15
AP3B2-215ENST00000620652 HIRIP3Q9BW71 556 aaPredicted RBP14.11□□□□□ -0.15
AP3B2-215ENST00000620652 ZNF608Q9ULD9 1512 aaPredicted RBP14.11□□□□□ -0.15
AP3B2-215ENST00000620652 IPO9Q96P70 1041 aaKnown RBP14.1□□□□□ -0.15
AP3B2-215ENST00000620652 LAS1LQ9Y4W2 734 aaKnown RBP14.1□□□□□ -0.15
AP3B2-215ENST00000620652 EIF4G3O43432 1585 aaKnown RBP14.1□□□□□ -0.15
AP3B2-215ENST00000620652 DDX10Q13206 875 aaKnown RBP14.09□□□□□ -0.15
AP3B2-215ENST00000620652 B4GALNT3Q6L9W6 998 aa14.09□□□□□ -0.15
AP3B2-215ENST00000620652 WASHC2AQ641Q2 1341 aa14.08□□□□□ -0.16
AP3B2-215ENST00000620652 GRIN2BQ13224 1484 aa14.07□□□□□ -0.16
AP3B2-215ENST00000620652 PPP4R2Q9NY27 417 aa14.05□□□□□ -0.16
AP3B2-215ENST00000620652 ARAP1Q96P48 1450 aa14.04□□□□□ -0.16
AP3B2-215ENST00000620652 WASHC2CQ9Y4E1 1318 aa14.03□□□□□ -0.16
AP3B2-215ENST00000620652 FHAD1B1AJZ9 1412 aa14.03□□□□□ -0.16
AP3B2-215ENST00000620652 ARHGAP35Q9NRY4 1499 aa14.02□□□□□ -0.16
AP3B2-215ENST00000620652 PDE4CQ08493 712 aa14.02□□□□□ -0.16
AP3B2-215ENST00000620652 FHOD3Q2V2M9 1422 aa14.02□□□□□ -0.16
AP3B2-215ENST00000620652 RBM10P98175 930 aaKnown RBP14.02□□□□□ -0.17
AP3B2-215ENST00000620652 ABCA5Q8WWZ7 1642 aa14.01□□□□□ -0.17
AP3B2-215ENST00000620652 SNAPC4Q5SXM2 1469 aa14□□□□□ -0.17
AP3B2-215ENST00000620652 CUL7Q14999 1698 aa14□□□□□ -0.17
AP3B2-215ENST00000620652 NPM2Q86SE8 214 aaKnown RBP13.99□□□□□ -0.17
AP3B2-215ENST00000620652 PBRM1Q86U86 1689 aa13.99□□□□□ -0.17
AP3B2-215ENST00000620652 SIN3AQ96ST3 1273 aa13.99□□□□□ -0.17
AP3B2-215ENST00000620652 HNRNPUQ00839 825 aaKnown RBP eCLIP13.97□□□□□ -0.17
AP3B2-215ENST00000620652 FGD1P98174 961 aa13.97□□□□□ -0.17
AP3B2-215ENST00000620652 USP35Q9P2H5 1018 aa13.96□□□□□ -0.17
AP3B2-215ENST00000620652 HSP90AA2PQ14568 343 aaPredicted RBP13.95□□□□□ -0.18
AP3B2-215ENST00000620652 GSE1Q14687 1217 aa13.95□□□□□ -0.18
AP3B2-215ENST00000620652 AAMPQ13685 434 aa13.95□□□□□ -0.18
AP3B2-215ENST00000620652 CHD1O14646 1710 aa13.94□□□□□ -0.18
AP3B2-215ENST00000620652 ANP32CO43423 234 aa13.94□□□□□ -0.18
AP3B2-215ENST00000620652 CNGB1Q14028 1251 aaPredicted RBP13.93□□□□□ -0.18
AP3B2-215ENST00000620652 DNAJC5Q9H3Z4 198 aa13.93□□□□□ -0.18
AP3B2-215ENST00000620652 CHIC2Q9UKJ5 165 aa13.91□□□□□ -0.18
AP3B2-215ENST00000620652 FAM43AQ8N2R8 423 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms