RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 SYNJ1O43426 1573 aa13.61□□□□□ -0.23
TNFAIP3-210ENST00000620204 EIF5BO60841 1220 aaKnown RBP13.6□□□□□ -0.23
TNFAIP3-210ENST00000620204 MYT1LQ9UL68 1186 aa13.58□□□□□ -0.23
TNFAIP3-210ENST00000620204 DHX57Q6P158 1386 aaKnown RBP13.58□□□□□ -0.24
TNFAIP3-210ENST00000620204 B4GALNT3Q6L9W6 998 aa13.58□□□□□ -0.24
TNFAIP3-210ENST00000620204 SIN3AQ96ST3 1273 aa13.57□□□□□ -0.24
TNFAIP3-210ENST00000620204 CLIP1P30622 1438 aa13.57□□□□□ -0.24
TNFAIP3-210ENST00000620204 FANCIQ9NVI1 1328 aa13.56□□□□□ -0.24
TNFAIP3-210ENST00000620204 P3H3Q8IVL6 736 aa13.55□□□□□ -0.24
TNFAIP3-210ENST00000620204 CFTRP13569 1480 aa13.54□□□□□ -0.24
TNFAIP3-210ENST00000620204 NOP58Q9Y2X3 529 aaKnown RBP13.54□□□□□ -0.24
TNFAIP3-210ENST00000620204 NPM2Q86SE8 214 aaKnown RBP13.53□□□□□ -0.24
TNFAIP3-210ENST00000620204 FANCD2Q9BXW9 1451 aa13.53□□□□□ -0.24
TNFAIP3-210ENST00000620204 SENP3-EIF4A1A0A087X0R7 540 aa13.5□□□□□ -0.25
TNFAIP3-210ENST00000620204 IL27Q8NEV9 243 aa13.5□□□□□ -0.25
TNFAIP3-210ENST00000620204 FAM50AQ14320 339 aaKnown RBP13.5□□□□□ -0.25
TNFAIP3-210ENST00000620204 CUX2O14529 1486 aa13.5□□□□□ -0.25
TNFAIP3-210ENST00000620204 PAK3O75914 559 aaPredicted RBP13.49□□□□□ -0.25
TNFAIP3-210ENST00000620204 KANK4Q5T7N3 995 aaPredicted RBP13.49□□□□□ -0.25
TNFAIP3-210ENST00000620204 GOLGA3Q08378 1498 aa13.49□□□□□ -0.25
TNFAIP3-210ENST00000620204 ANP32AP39687 249 aaKnown RBP13.48□□□□□ -0.25
TNFAIP3-210ENST00000620204 FAM9BQ8IZU0 186 aa13.48□□□□□ -0.25
TNFAIP3-210ENST00000620204 CUX1P39880 1505 aa13.47□□□□□ -0.25
TNFAIP3-210ENST00000620204 ZBTB47Q9UFB7 747 aaPredicted RBP13.47□□□□□ -0.25
TNFAIP3-210ENST00000620204 FBLN2P98095 1184 aa13.46□□□□□ -0.25
TNFAIP3-210ENST00000620204 EEA1Q15075 1411 aa13.46□□□□□ -0.25
TNFAIP3-210ENST00000620204 KIF27Q86VH2 1401 aa13.46□□□□□ -0.25
TNFAIP3-210ENST00000620204 PPP4R2Q9NY27 417 aa13.44□□□□□ -0.26
TNFAIP3-210ENST00000620204 TDRD9Q8NDG6 1382 aaKnown RBP13.44□□□□□ -0.26
TNFAIP3-210ENST00000620204 RAPGEF2Q9Y4G8 1499 aa13.44□□□□□ -0.26
TNFAIP3-210ENST00000620204 RAD54L2Q9Y4B4 1467 aa13.43□□□□□ -0.26
TNFAIP3-210ENST00000620204 LAS1LQ9Y4W2 734 aaKnown RBP13.42□□□□□ -0.26
TNFAIP3-210ENST00000620204 FGD5Q6ZNL6 1462 aa13.42□□□□□ -0.26
TNFAIP3-210ENST00000620204 CEP164Q9UPV0 1460 aa13.42□□□□□ -0.26
TNFAIP3-210ENST00000620204 ERCC6Q03468 1493 aa13.41□□□□□ -0.26
TNFAIP3-210ENST00000620204 PDS5BQ9NTI5 1447 aa13.41□□□□□ -0.26
TNFAIP3-210ENST00000620204 VPS8Q8N3P4 1428 aa13.4□□□□□ -0.26
TNFAIP3-210ENST00000620204 CCER2I3L3R5 266 aa13.4□□□□□ -0.26
TNFAIP3-210ENST00000620204 TOP2BQ02880 1626 aa13.39□□□□□ -0.27
TNFAIP3-210ENST00000620204 ARID3CA6NKF2 412 aa13.38□□□□□ -0.27
TNFAIP3-210ENST00000620204 POLR3GLQ9BT43 218 aa13.38□□□□□ -0.27
TNFAIP3-210ENST00000620204 PPP1R15AO75807 674 aaPredicted RBP13.37□□□□□ -0.27
TNFAIP3-210ENST00000620204 CARMIL1Q5VZK9 1371 aa13.34□□□□□ -0.27
TNFAIP3-210ENST00000620204 NEFMP07197 916 aa13.34□□□□□ -0.27
TNFAIP3-210ENST00000620204 ERICH6BQ5W0A0 696 aa13.32□□□□□ -0.28
TNFAIP3-210ENST00000620204 RAB3GAP2Q9H2M9 1393 aa13.32□□□□□ -0.28
TNFAIP3-210ENST00000620204 MRS2Q9HD23 443 aa13.31□□□□□ -0.28
TNFAIP3-210ENST00000620204 TOPBP1Q92547 1522 aa13.3□□□□□ -0.28
TNFAIP3-210ENST00000620204 IPO9Q96P70 1041 aaKnown RBP13.29□□□□□ -0.28
TNFAIP3-210ENST00000620204 IGF1RP08069 1367 aa13.29□□□□□ -0.28
TNFAIP3-210ENST00000620204 TONSLQ96HA7 1378 aa13.28□□□□□ -0.28
TNFAIP3-210ENST00000620204 POLA1P09884 1462 aaPredicted RBP13.28□□□□□ -0.28
TNFAIP3-210ENST00000620204 CCNB3Q8WWL7 1395 aa13.28□□□□□ -0.28
TNFAIP3-210ENST00000620204 BIVM-ERCC5R4GMW8 1640 aa13.26□□□□□ -0.29
TNFAIP3-210ENST00000620204 URB2Q14146 1524 aaKnown RBP13.26□□□□□ -0.29
TNFAIP3-210ENST00000620204 DAXXQ9UER7 740 aaPredicted RBP13.25□□□□□ -0.29
TNFAIP3-210ENST00000620204 LAMC3Q9Y6N6 1575 aa13.25□□□□□ -0.29
TNFAIP3-210ENST00000620204 AQRO60306 1485 aaKnown RBP eCLIP13.23□□□□□ -0.299e-7■■■■□ 24.2
TNFAIP3-210ENST00000620204 CCDC184Q52MB2 194 aa13.23□□□□□ -0.29
TNFAIP3-210ENST00000620204 BRPF3Q9ULD4 1205 aa13.22□□□□□ -0.29
TNFAIP3-210ENST00000620204 TIMELESSQ9UNS1 1208 aa13.22□□□□□ -0.29
TNFAIP3-210ENST00000620204 DNMBPQ6XZF7 1577 aa13.21□□□□□ -0.29
TNFAIP3-210ENST00000620204 CHMP7Q8WUX9 453 aaPredicted RBP13.21□□□□□ -0.29
TNFAIP3-210ENST00000620204 WDR97A6NE52 1622 aa13.2□□□□□ -0.3
TNFAIP3-210ENST00000620204 KIF21AQ7Z4S6 1674 aa13.19□□□□□ -0.3
TNFAIP3-210ENST00000620204 PRXQ9BXM0 1461 aa13.18□□□□□ -0.3
TNFAIP3-210ENST00000620204 KIF21BO75037 1637 aa13.18□□□□□ -0.3
TNFAIP3-210ENST00000620204 GAPVD1Q14C86 1478 aa13.17□□□□□ -0.3
TNFAIP3-210ENST00000620204 ARXQ96QS3 562 aa13.16□□□□□ -0.3
TNFAIP3-210ENST00000620204 UBE2Q2Q8WVN8 375 aa13.15□□□□□ -0.3
TNFAIP3-210ENST00000620204 SETD5Q9C0A6 1442 aa13.15□□□□□ -0.3
TNFAIP3-210ENST00000620204 MRC2Q9UBG0 1479 aa13.14□□□□□ -0.31
TNFAIP3-210ENST00000620204 PRDM2Q13029 1718 aa13.14□□□□□ -0.31
TNFAIP3-210ENST00000620204 SLC4A3P48751 1232 aa13.13□□□□□ -0.31
TNFAIP3-210ENST00000620204 FHOD3Q2V2M9 1422 aa13.13□□□□□ -0.31
TNFAIP3-210ENST00000620204 HSPA5P11021 654 aaKnown RBP13.12□□□□□ -0.31
TNFAIP3-210ENST00000620204 ABCA10Q8WWZ4 1543 aa13.1□□□□□ -0.31
TNFAIP3-210ENST00000620204 ZNF608Q9ULD9 1512 aaPredicted RBP13.1□□□□□ -0.31
TNFAIP3-210ENST00000620204 PPM1GO15355 546 aaPredicted RBP13.09□□□□□ -0.31
TNFAIP3-210ENST00000620204 ARAP1Q96P48 1450 aa13.09□□□□□ -0.31
TNFAIP3-210ENST00000620204 EIF4G2P78344 907 aaKnown RBP eCLIP13.09□□□□□ -0.31
TNFAIP3-210ENST00000620204 ZNF326Q5BKZ1 582 aaKnown RBP13.08□□□□□ -0.32
TNFAIP3-210ENST00000620204 ERICH3Q5RHP9 1530 aa13.07□□□□□ -0.32
TNFAIP3-210ENST00000620204 AKNAQ7Z591 1439 aa13.06□□□□□ -0.32
TNFAIP3-210ENST00000620204 GSE1Q14687 1217 aa13.05□□□□□ -0.32
TNFAIP3-210ENST00000620204 CHIC2Q9UKJ5 165 aa13.05□□□□□ -0.32
TNFAIP3-210ENST00000620204 ARHGAP35Q9NRY4 1499 aa13.05□□□□□ -0.32
TNFAIP3-210ENST00000620204 WASHC2AQ641Q2 1341 aa13.05□□□□□ -0.32
TNFAIP3-210ENST00000620204 PRKRIP1Q9H875 184 aaPredicted RBP13.04□□□□□ -0.32
TNFAIP3-210ENST00000620204 RRBP1Q9P2E9 1410 aaKnown RBP13.04□□□□□ -0.32
TNFAIP3-210ENST00000620204 PDE4AP27815 886 aa13.04□□□□□ -0.32
TNFAIP3-210ENST00000620204 ZBED9Q6R2W3 1325 aa13.03□□□□□ -0.32
TNFAIP3-210ENST00000620204 MAPKBP1O60336 1514 aa13.02□□□□□ -0.33
TNFAIP3-210ENST00000620204 PKNOX2Q96KN3 472 aa13.02□□□□□ -0.33
TNFAIP3-210ENST00000620204 SKAP1Q86WV1 359 aa13.01□□□□□ -0.33
TNFAIP3-210ENST00000620204 FRAT1Q92837 279 aaPredicted RBP13.01□□□□□ -0.33
TNFAIP3-210ENST00000620204 TMC1Q8TDI8 760 aa13.01□□□□□ -0.33
TNFAIP3-210ENST00000620204 USP35Q9P2H5 1018 aa13.01□□□□□ -0.33
TNFAIP3-210ENST00000620204 VSIG10Q8N0Z9 540 aa13□□□□□ -0.33
TNFAIP3-210ENST00000620204 RRP7BPQ9NSQ0 103 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms