RNA–Protein interactions for RNA: ENST00000619914.1

SYNRG-226, Transcript of synergin gamma, humanhuman

TSL 2

Gene SYNRG, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-226ENST00000619914 TTBK1Q5TCY1 1321 aaPredicted RBP12.68□□□□□ -0.38
SYNRG-226ENST00000619914 DIEXFQ68CQ4 756 aaKnown RBP12.67□□□□□ -0.38
SYNRG-226ENST00000619914 ILDR1Q86SU0 546 aaPredicted RBP12.67□□□□□ -0.38
SYNRG-226ENST00000619914 ACIN1Q9UKV3 1341 aaKnown RBP12.65□□□□□ -0.38
SYNRG-226ENST00000619914 RAPGEF2Q9Y4G8 1499 aa12.64□□□□□ -0.39
SYNRG-226ENST00000619914 ERICH3Q5RHP9 1530 aa12.64□□□□□ -0.39
SYNRG-226ENST00000619914 TOPBP1Q92547 1522 aa12.62□□□□□ -0.39
SYNRG-226ENST00000619914 AQRO60306 1485 aaKnown RBP eCLIP12.61□□□□□ -0.395e-7■■■■■ 34.1
SYNRG-226ENST00000619914 ZNF316A6NFI3 1004 aaPredicted RBP12.61□□□□□ -0.39
SYNRG-226ENST00000619914 CENPBP07199 599 aaPredicted RBP12.61□□□□□ -0.39
SYNRG-226ENST00000619914 PRDM2Q13029 1718 aa12.61□□□□□ -0.39
SYNRG-226ENST00000619914 APLP2Q06481 763 aa12.6□□□□□ -0.39
SYNRG-226ENST00000619914 PRXQ9BXM0 1461 aa12.57□□□□□ -0.4
SYNRG-226ENST00000619914 NEUROD1Q13562 356 aa12.55□□□□□ -0.4
SYNRG-226ENST00000619914 CLASP1Q7Z460 1538 aa12.54□□□□□ -0.4
SYNRG-226ENST00000619914 CHMP7Q8WUX9 453 aaPredicted RBP12.54□□□□□ -0.4
SYNRG-226ENST00000619914 HNRNPUL2Q1KMD3 747 aaKnown RBP12.53□□□□□ -0.4
SYNRG-226ENST00000619914 TARBP1Q13395 1621 aaKnown RBP12.52□□□□□ -0.4
SYNRG-226ENST00000619914 DNMBPQ6XZF7 1577 aa12.52□□□□□ -0.4
SYNRG-226ENST00000619914 CUX1P39880 1505 aa12.52□□□□□ -0.41
SYNRG-226ENST00000619914 GAPVD1Q14C86 1478 aa12.51□□□□□ -0.41
SYNRG-226ENST00000619914 KIF27Q86VH2 1401 aa12.5□□□□□ -0.41
SYNRG-226ENST00000619914 CLSPNQ9HAW4 1339 aa12.5□□□□□ -0.41
SYNRG-226ENST00000619914 SNAPC4Q5SXM2 1469 aa12.48□□□□□ -0.41
SYNRG-226ENST00000619914 TDRD9Q8NDG6 1382 aaKnown RBP12.45□□□□□ -0.42
SYNRG-226ENST00000619914 POLA1P09884 1462 aaPredicted RBP12.45□□□□□ -0.42
SYNRG-226ENST00000619914 GTF3C3Q9Y5Q9 886 aa12.45□□□□□ -0.42
SYNRG-226ENST00000619914 MAGI1Q96QZ7 1491 aaPredicted RBP12.44□□□□□ -0.42
SYNRG-226ENST00000619914 RRBP1Q9P2E9 1410 aaKnown RBP12.42□□□□□ -0.42
SYNRG-226ENST00000619914 WDR97A6NE52 1622 aa12.41□□□□□ -0.42
SYNRG-226ENST00000619914 RAD54L2Q9Y4B4 1467 aa12.4□□□□□ -0.42
SYNRG-226ENST00000619914 RANGAP1P46060 587 aaPredicted RBP12.4□□□□□ -0.42
SYNRG-226ENST00000619914 SYNJ2O15056 1496 aa12.4□□□□□ -0.42
SYNRG-226ENST00000619914 DHX57Q6P158 1386 aaKnown RBP12.39□□□□□ -0.43
SYNRG-226ENST00000619914 KDM4FA0A1W2PPD8 638 aa12.39□□□□□ -0.43
SYNRG-226ENST00000619914 ARHGAP35Q9NRY4 1499 aa12.38□□□□□ -0.43
SYNRG-226ENST00000619914 GRIN2BQ13224 1484 aa12.38□□□□□ -0.43
SYNRG-226ENST00000619914 MAP3K1Q13233 1512 aa12.37□□□□□ -0.43
SYNRG-226ENST00000619914 KANK4Q5T7N3 995 aaPredicted RBP12.35□□□□□ -0.43
SYNRG-226ENST00000619914 MIER1Q8N108 512 aa12.35□□□□□ -0.43
SYNRG-226ENST00000619914 KIF13AQ9H1H9 1805 aa12.35□□□□□ -0.43
SYNRG-226ENST00000619914 CCNB3Q8WWL7 1395 aa12.32□□□□□ -0.44
SYNRG-226ENST00000619914 TIAM1Q13009 1591 aa12.31□□□□□ -0.44
SYNRG-226ENST00000619914 IGF1RP08069 1367 aa12.31□□□□□ -0.44
SYNRG-226ENST00000619914 FAM69CQ0P6D2 419 aa12.3□□□□□ -0.44
SYNRG-226ENST00000619914 YTHDC1Q96MU7 727 aaKnown RBP12.29□□□□□ -0.44
SYNRG-226ENST00000619914 FGD5Q6ZNL6 1462 aa12.28□□□□□ -0.44
SYNRG-226ENST00000619914 ERCC6L2Q5T890 1561 aa12.27□□□□□ -0.44
SYNRG-226ENST00000619914 CARMIL1Q5VZK9 1371 aa12.27□□□□□ -0.44
SYNRG-226ENST00000619914 MAPK8IP2Q13387 824 aaPredicted RBP12.26□□□□□ -0.45
SYNRG-226ENST00000619914 KDM6BO15054 1643 aa12.26□□□□□ -0.45
SYNRG-226ENST00000619914 CFAP43Q8NDM7 1665 aa12.26□□□□□ -0.45
SYNRG-226ENST00000619914 NPM1P06748 294 aaKnown RBP eCLIP12.26□□□□□ -0.45
SYNRG-226ENST00000619914 FHAD1B1AJZ9 1412 aa12.25□□□□□ -0.45
SYNRG-226ENST00000619914 CEP170Q5SW79 1584 aa12.24□□□□□ -0.45
SYNRG-226ENST00000619914 PBRM1Q86U86 1689 aa12.24□□□□□ -0.45
SYNRG-226ENST00000619914 ABCC10Q5T3U5 1492 aa12.24□□□□□ -0.45
SYNRG-226ENST00000619914 LRRC9Q6ZRR7 1453 aa12.23□□□□□ -0.45
SYNRG-226ENST00000619914 FBXO41Q8TF61 875 aa12.2□□□□□ -0.46
SYNRG-226ENST00000619914 RAB3GAP2Q9H2M9 1393 aa12.2□□□□□ -0.46
SYNRG-226ENST00000619914 EFCAB5A4FU69 1503 aa12.19□□□□□ -0.46
SYNRG-226ENST00000619914 GRIN2AQ12879 1464 aa12.19□□□□□ -0.46
SYNRG-226ENST00000619914 SETD5Q9C0A6 1442 aa12.19□□□□□ -0.46
SYNRG-226ENST00000619914 PCF11O94913 1555 aaKnown RBP12.19□□□□□ -0.46
SYNRG-226ENST00000619914 MAPKBP1O60336 1514 aa12.19□□□□□ -0.46
SYNRG-226ENST00000619914 CUL7Q14999 1698 aa12.19□□□□□ -0.46
SYNRG-226ENST00000619914 HECW2Q9P2P5 1572 aa12.18□□□□□ -0.46
SYNRG-226ENST00000619914 ABCA10Q8WWZ4 1543 aa12.17□□□□□ -0.46
SYNRG-226ENST00000619914 PPP4R3CPQ6ZMV5 832 aa12.17□□□□□ -0.46
SYNRG-226ENST00000619914 NUP160Q12769 1436 aa12.17□□□□□ -0.46
SYNRG-226ENST00000619914 DIP2BQ9P265 1576 aa12.17□□□□□ -0.46
SYNRG-226ENST00000619914 CTTNBP2Q8WZ74 1663 aa12.16□□□□□ -0.46
SYNRG-226ENST00000619914 SHROOM2Q13796 1616 aa12.16□□□□□ -0.46
SYNRG-226ENST00000619914 FYCO1Q9BQS8 1478 aa12.16□□□□□ -0.46
SYNRG-226ENST00000619914 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.15□□□□□ -0.46
SYNRG-226ENST00000619914 ADGRL1O94910 1474 aa12.15□□□□□ -0.46
SYNRG-226ENST00000619914 MYT1Q01538 1121 aa12.15□□□□□ -0.46
SYNRG-226ENST00000619914 PHLDB1Q86UU1 1377 aa12.15□□□□□ -0.46
SYNRG-226ENST00000619914 TSPOAP1O95153 1857 aa12.14□□□□□ -0.47
SYNRG-226ENST00000619914 DMRT2Q9Y5R5 561 aa12.14□□□□□ -0.47
SYNRG-226ENST00000619914 CASKIN1Q8WXD9 1431 aa12.14□□□□□ -0.47
SYNRG-226ENST00000619914 ITGAEP38570 1179 aa12.13□□□□□ -0.47
SYNRG-226ENST00000619914 PRG4Q92954 1404 aaPredicted RBP12.13□□□□□ -0.47
SYNRG-226ENST00000619914 ABCA5Q8WWZ7 1642 aa12.12□□□□□ -0.47
SYNRG-226ENST00000619914 TIMELESSQ9UNS1 1208 aa12.12□□□□□ -0.47
SYNRG-226ENST00000619914 JPH4Q96JJ6 628 aa12.1□□□□□ -0.47
SYNRG-226ENST00000619914 ADAMTS12P58397 1594 aa12.09□□□□□ -0.47
SYNRG-226ENST00000619914 FHOD3Q2V2M9 1422 aa12.09□□□□□ -0.47
SYNRG-226ENST00000619914 FMN1Q68DA7 1419 aa12.08□□□□□ -0.48
SYNRG-226ENST00000619914 FAM50AQ14320 339 aaKnown RBP12.07□□□□□ -0.48
SYNRG-226ENST00000619914 CACNB1Q02641 598 aaPredicted RBP12.06□□□□□ -0.48
SYNRG-226ENST00000619914 LMTK3Q96Q04 1460 aa12.06□□□□□ -0.48
SYNRG-226ENST00000619914 SAMD9Q5K651 1589 aa12.05□□□□□ -0.48
SYNRG-226ENST00000619914 P3H3Q8IVL6 736 aa12.03□□□□□ -0.48
SYNRG-226ENST00000619914 ADCY10Q96PN6 1610 aa12.03□□□□□ -0.48
SYNRG-226ENST00000619914 FGD6Q6ZV73 1430 aa12.03□□□□□ -0.48
SYNRG-226ENST00000619914 ATP1B4Q9UN42 357 aaPredicted RBP12.01□□□□□ -0.49
SYNRG-226ENST00000619914 SUPT16HQ9Y5B9 1047 aaKnown RBP12□□□□□ -0.49
SYNRG-226ENST00000619914 SIN3AQ96ST3 1273 aa12□□□□□ -0.49
SYNRG-226ENST00000619914 SUPT6HQ7KZ85 1726 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms