RNA–Protein interactions for RNA: ENST00000619750.1

PCDHGA3-203, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA3, Length 2,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-203ENST00000619750 CCNB3Q8WWL7 1395 aa20.87■□□□□ 0.93
PCDHGA3-203ENST00000619750 CUX2O14529 1486 aa20.84■□□□□ 0.93
PCDHGA3-203ENST00000619750 KCNH8Q96L42 1107 aa20.84■□□□□ 0.93
PCDHGA3-203ENST00000619750 RRBP1Q9P2E9 1410 aaKnown RBP20.82■□□□□ 0.92
PCDHGA3-203ENST00000619750 MRC2Q9UBG0 1479 aa20.82■□□□□ 0.92
PCDHGA3-203ENST00000619750 FAM50AQ14320 339 aaKnown RBP20.81■□□□□ 0.92
PCDHGA3-203ENST00000619750 ABCA10Q8WWZ4 1543 aa20.79■□□□□ 0.92
PCDHGA3-203ENST00000619750 RAD54L2Q9Y4B4 1467 aa20.79■□□□□ 0.92
PCDHGA3-203ENST00000619750 CLSPNQ9HAW4 1339 aa20.79■□□□□ 0.92
PCDHGA3-203ENST00000619750 RAB3GAP2Q9H2M9 1393 aa20.78■□□□□ 0.92
PCDHGA3-203ENST00000619750 WDR97A6NE52 1622 aa20.77■□□□□ 0.91
PCDHGA3-203ENST00000619750 SIN3AQ96ST3 1273 aa20.76■□□□□ 0.91
PCDHGA3-203ENST00000619750 IGF1RP08069 1367 aa20.76■□□□□ 0.91
PCDHGA3-203ENST00000619750 HIRIP3Q9BW71 556 aaPredicted RBP20.76■□□□□ 0.91
PCDHGA3-203ENST00000619750 ERCC6Q03468 1493 aa20.74■□□□□ 0.91
PCDHGA3-203ENST00000619750 WDR62O43379 1518 aa20.73■□□□□ 0.91
PCDHGA3-203ENST00000619750 CARMIL1Q5VZK9 1371 aa20.7■□□□□ 0.9
PCDHGA3-203ENST00000619750 SUPT16HQ9Y5B9 1047 aaKnown RBP20.7■□□□□ 0.9
PCDHGA3-203ENST00000619750 PHLDB1Q86UU1 1377 aa20.69■□□□□ 0.9
PCDHGA3-203ENST00000619750 TARBP1Q13395 1621 aaKnown RBP20.68■□□□□ 0.9
PCDHGA3-203ENST00000619750 THOC2Q8NI27 1593 aaKnown RBP20.67■□□□□ 0.9
PCDHGA3-203ENST00000619750 DDX10Q13206 875 aaKnown RBP20.66■□□□□ 0.9
PCDHGA3-203ENST00000619750 ABCA5Q8WWZ7 1642 aa20.65■□□□□ 0.9
PCDHGA3-203ENST00000619750 MAPKBP1O60336 1514 aa20.64■□□□□ 0.9
PCDHGA3-203ENST00000619750 TIAM1Q13009 1591 aa20.63■□□□□ 0.89
PCDHGA3-203ENST00000619750 BCANQ96GW7 911 aa20.62■□□□□ 0.89
PCDHGA3-203ENST00000619750 FHOD3Q2V2M9 1422 aa20.6■□□□□ 0.89
PCDHGA3-203ENST00000619750 LRRC9Q6ZRR7 1453 aa20.59■□□□□ 0.89
PCDHGA3-203ENST00000619750 SETD5Q9C0A6 1442 aa20.59■□□□□ 0.89
PCDHGA3-203ENST00000619750 CUL7Q14999 1698 aa20.58■□□□□ 0.88
PCDHGA3-203ENST00000619750 TDRD9Q8NDG6 1382 aaKnown RBP20.57■□□□□ 0.88
PCDHGA3-203ENST00000619750 GAPVD1Q14C86 1478 aa20.57■□□□□ 0.88
PCDHGA3-203ENST00000619750 IFT140Q96RY7 1462 aa20.56■□□□□ 0.88
PCDHGA3-203ENST00000619750 PCF11O94913 1555 aaKnown RBP20.53■□□□□ 0.88
PCDHGA3-203ENST00000619750 PBRM1Q86U86 1689 aa20.5■□□□□ 0.87
PCDHGA3-203ENST00000619750 TRIM52Q96A61 297 aa20.45■□□□□ 0.86
PCDHGA3-203ENST00000619750 AQRO60306 1485 aaKnown RBP eCLIP20.45■□□□□ 0.86
PCDHGA3-203ENST00000619750 FHAD1B1AJZ9 1412 aa20.44■□□□□ 0.86
PCDHGA3-203ENST00000619750 ZNF608Q9ULD9 1512 aaPredicted RBP20.44■□□□□ 0.86
PCDHGA3-203ENST00000619750 EIF4G3O43432 1585 aaKnown RBP20.41■□□□□ 0.86
PCDHGA3-203ENST00000619750 GRIN2BQ13224 1484 aa20.41■□□□□ 0.86
PCDHGA3-203ENST00000619750 FKBP8Q14318 412 aa20.4■□□□□ 0.86
PCDHGA3-203ENST00000619750 TSHZ2Q9NRE2 1034 aa20.4■□□□□ 0.86
PCDHGA3-203ENST00000619750 MAP3K1Q13233 1512 aa20.38■□□□□ 0.85
PCDHGA3-203ENST00000619750 ADAMTS12P58397 1594 aa20.38■□□□□ 0.85
PCDHGA3-203ENST00000619750 ARID3CA6NKF2 412 aa20.37■□□□□ 0.85
PCDHGA3-203ENST00000619750 CFAP43Q8NDM7 1665 aa20.36■□□□□ 0.85
PCDHGA3-203ENST00000619750 CTTNBP2Q8WZ74 1663 aa20.36■□□□□ 0.85
PCDHGA3-203ENST00000619750 PPP1R15AO75807 674 aaPredicted RBP20.36■□□□□ 0.85
PCDHGA3-203ENST00000619750 MYT1Q01538 1121 aa20.33■□□□□ 0.85
PCDHGA3-203ENST00000619750 MTUS2Q5JR59 1369 aa20.33■□□□□ 0.85
PCDHGA3-203ENST00000619750 CHIC2Q9UKJ5 165 aa20.32■□□□□ 0.84
PCDHGA3-203ENST00000619750 TONSLQ96HA7 1378 aa20.3■□□□□ 0.84
PCDHGA3-203ENST00000619750 PTPRKQ15262 1439 aa20.3■□□□□ 0.84
PCDHGA3-203ENST00000619750 FYCO1Q9BQS8 1478 aa20.29■□□□□ 0.84
PCDHGA3-203ENST00000619750 CASKIN1Q8WXD9 1431 aa20.29■□□□□ 0.84
PCDHGA3-203ENST00000619750 ANP32CO43423 234 aa20.29■□□□□ 0.84
PCDHGA3-203ENST00000619750 SNAPC4Q5SXM2 1469 aa20.28■□□□□ 0.84
PCDHGA3-203ENST00000619750 FGD6Q6ZV73 1430 aa20.28■□□□□ 0.84
PCDHGA3-203ENST00000619750 RRP7BPQ9NSQ0 103 aa20.28■□□□□ 0.84
PCDHGA3-203ENST00000619750 CCDC18Q5T9S5 1454 aa20.26■□□□□ 0.83
PCDHGA3-203ENST00000619750 MAGI1Q96QZ7 1491 aaPredicted RBP20.25■□□□□ 0.83
PCDHGA3-203ENST00000619750 EFCAB5A4FU69 1503 aa20.21■□□□□ 0.83
PCDHGA3-203ENST00000619750 FMN1Q68DA7 1419 aa20.19■□□□□ 0.82
PCDHGA3-203ENST00000619750 IRX6P78412 446 aaPredicted RBP20.18■□□□□ 0.82
PCDHGA3-203ENST00000619750 FOXD1Q16676 465 aa20.18■□□□□ 0.82
PCDHGA3-203ENST00000619750 GRIN2AQ12879 1464 aa20.17■□□□□ 0.82
PCDHGA3-203ENST00000619750 SYNJ2O15056 1496 aa20.17■□□□□ 0.82
PCDHGA3-203ENST00000619750 NEFLP07196 543 aa20.17■□□□□ 0.82
PCDHGA3-203ENST00000619750 NCOA2Q15596 1464 aa20.16■□□□□ 0.82
PCDHGA3-203ENST00000619750 LRRIQ1Q96JM4 1722 aa20.16■□□□□ 0.82
PCDHGA3-203ENST00000619750 TIMELESSQ9UNS1 1208 aa20.14■□□□□ 0.82
PCDHGA3-203ENST00000619750 IQGAP2Q13576 1575 aa20.14■□□□□ 0.81
PCDHGA3-203ENST00000619750 SAMD9Q5K651 1589 aa20.14■□□□□ 0.81
PCDHGA3-203ENST00000619750 NAIPQ13075 1403 aa20.13■□□□□ 0.81
PCDHGA3-203ENST00000619750 PTPN23Q9H3S7 1636 aa20.13■□□□□ 0.81
PCDHGA3-203ENST00000619750 HFM1A2PYH4 1435 aa20.12■□□□□ 0.81
PCDHGA3-203ENST00000619750 UACAQ9BZF9 1416 aa20.12■□□□□ 0.81
PCDHGA3-203ENST00000619750 HNRNPUQ00839 825 aaKnown RBP eCLIP20.11■□□□□ 0.81
PCDHGA3-203ENST00000619750 MYOM3Q5VTT5 1437 aa20.1■□□□□ 0.81
PCDHGA3-203ENST00000619750 CNGB1Q14028 1251 aaPredicted RBP20.1■□□□□ 0.81
PCDHGA3-203ENST00000619750 CCER2I3L3R5 266 aa20.09■□□□□ 0.81
PCDHGA3-203ENST00000619750 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.08■□□□□ 0.8
PCDHGA3-203ENST00000619750 KIAA0586Q9BVV6 1533 aa20.07■□□□□ 0.8
PCDHGA3-203ENST00000619750 CHMP7Q8WUX9 453 aaPredicted RBP20.07■□□□□ 0.8
PCDHGA3-203ENST00000619750 HSPA5P11021 654 aaKnown RBP20.07■□□□□ 0.8
PCDHGA3-203ENST00000619750 MAGI3Q5TCQ9 1506 aa20.06■□□□□ 0.8
PCDHGA3-203ENST00000619750 CEP170Q5SW79 1584 aa20.06■□□□□ 0.8
PCDHGA3-203ENST00000619750 UGGT2Q9NYU1 1516 aa20.04■□□□□ 0.8
PCDHGA3-203ENST00000619750 WASHC2AQ641Q2 1341 aa20.03■□□□□ 0.8
PCDHGA3-203ENST00000619750 CCDC184Q52MB2 194 aa20.03■□□□□ 0.8
PCDHGA3-203ENST00000619750 NUP160Q12769 1436 aa20.02■□□□□ 0.8
PCDHGA3-203ENST00000619750 KDM6BO15054 1643 aa20.01■□□□□ 0.79
PCDHGA3-203ENST00000619750 FBLN2P98095 1184 aa20■□□□□ 0.79
PCDHGA3-203ENST00000619750 SUPT6HQ7KZ85 1726 aaKnown RBP20■□□□□ 0.79
PCDHGA3-203ENST00000619750 RBM19Q9Y4C8 960 aaKnown RBP19.99■□□□□ 0.79
PCDHGA3-203ENST00000619750 CDK13Q14004 1512 aaKnown RBP19.99■□□□□ 0.79
PCDHGA3-203ENST00000619750 ANP32EQ9BTT0 268 aa19.99■□□□□ 0.79
PCDHGA3-203ENST00000619750 KDM5BQ9UGL1 1544 aa19.98■□□□□ 0.79
PCDHGA3-203ENST00000619750 SENP3-EIF4A1A0A087X0R7 540 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms