RNA–Protein interactions for RNA: ENST00000618773.4

UCHL3-206, Transcript of ubiquitin C-terminal hydrolase L3, humanhuman

TSL 5 BASIC

Gene UCHL3, Length 1,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCHL3-206ENST00000618773 SPDYE2BA6NHP3 402 aa19.36■□□□□ 0.69
UCHL3-206ENST00000618773 SPDYE6P0CI01 402 aa19.36■□□□□ 0.69
UCHL3-206ENST00000618773 SPDYE2Q495Y8 402 aa19.36■□□□□ 0.69
UCHL3-206ENST00000618773 CSRNP3Q8WYN3 585 aa19.35■□□□□ 0.69
UCHL3-206ENST00000618773 TOPBP1Q92547 1522 aa19.33■□□□□ 0.68
UCHL3-206ENST00000618773 ZNF608Q9ULD9 1512 aaPredicted RBP19.31■□□□□ 0.68
UCHL3-206ENST00000618773 PITPNM1O00562 1244 aa19.29■□□□□ 0.68
UCHL3-206ENST00000618773 MKRN4PQ13434 485 aaPredicted RBP19.29■□□□□ 0.68
UCHL3-206ENST00000618773 DNMBPQ6XZF7 1577 aa19.28■□□□□ 0.68
UCHL3-206ENST00000618773 EIF4G3O43432 1585 aaKnown RBP19.27■□□□□ 0.68
UCHL3-206ENST00000618773 IFT140Q96RY7 1462 aa19.27■□□□□ 0.67
UCHL3-206ENST00000618773 TRIM41Q8WV44 630 aa19.26■□□□□ 0.67
UCHL3-206ENST00000618773 TARBP1Q13395 1621 aaKnown RBP19.23■□□□□ 0.67
UCHL3-206ENST00000618773 PIP4P2Q8N4L2 257 aa19.23■□□□□ 0.67
UCHL3-206ENST00000618773 EHMT2Q96KQ7 1210 aa19.19■□□□□ 0.66
UCHL3-206ENST00000618773 ABCC8Q09428 1581 aa19.19■□□□□ 0.66
UCHL3-206ENST00000618773 RIMBP3CA6NJZ7 1639 aa19.18■□□□□ 0.66
UCHL3-206ENST00000618773 RIMBP3BA6NNM3 1639 aa19.18■□□□□ 0.66
UCHL3-206ENST00000618773 RIMBP3Q9UFD9 1639 aa19.18■□□□□ 0.66
UCHL3-206ENST00000618773 CHD1O14646 1710 aa19.18■□□□□ 0.66
UCHL3-206ENST00000618773 ZNF692Q9BU19 519 aaPredicted RBP19.18■□□□□ 0.66
UCHL3-206ENST00000618773 POLA1P09884 1462 aaPredicted RBP19.13■□□□□ 0.65
UCHL3-206ENST00000618773 FXR2P51116 673 aaKnown RBP eCLIP19.11■□□□□ 0.65
UCHL3-206ENST00000618773 AQRO60306 1485 aaKnown RBP eCLIP19.08■□□□□ 0.64
UCHL3-206ENST00000618773 ARHGEF11O15085 1522 aa19.06■□□□□ 0.64
UCHL3-206ENST00000618773 RAD54L2Q9Y4B4 1467 aa19.05■□□□□ 0.64
UCHL3-206ENST00000618773 CLEC11AQ9Y240 323 aa19.05■□□□□ 0.64
UCHL3-206ENST00000618773 SSUH2Q9Y2M2 353 aa19.05■□□□□ 0.64
UCHL3-206ENST00000618773 SPDYE1Q8NFV5 336 aaPredicted RBP19.04■□□□□ 0.64
UCHL3-206ENST00000618773 CUX1P39880 1505 aa19.04■□□□□ 0.64
UCHL3-206ENST00000618773 WDR97A6NE52 1622 aa19.03■□□□□ 0.64
UCHL3-206ENST00000618773 FGD5Q6ZNL6 1462 aa19.01■□□□□ 0.63
UCHL3-206ENST00000618773 SOGA1O94964 1423 aa18.95■□□□□ 0.62
UCHL3-206ENST00000618773 HAX1O00165 279 aa18.95■□□□□ 0.62
UCHL3-206ENST00000618773 PBRM1Q86U86 1689 aa18.94■□□□□ 0.62
UCHL3-206ENST00000618773 SNAPC4Q5SXM2 1469 aa18.93■□□□□ 0.62
UCHL3-206ENST00000618773 TDRD9Q8NDG6 1382 aaKnown RBP18.93■□□□□ 0.62
UCHL3-206ENST00000618773 SP7Q8TDD2 431 aaPredicted RBP18.91■□□□□ 0.62
UCHL3-206ENST00000618773 ARAP1Q96P48 1450 aa18.89■□□□□ 0.61
UCHL3-206ENST00000618773 CLASP1Q7Z460 1538 aa18.89■□□□□ 0.61
UCHL3-206ENST00000618773 ABCA5Q8WWZ7 1642 aa18.85■□□□□ 0.61
UCHL3-206ENST00000618773 MAGI1Q96QZ7 1491 aaPredicted RBP18.84■□□□□ 0.61
UCHL3-206ENST00000618773 PRKAR2AP13861 404 aaKnown RBP18.84■□□□□ 0.61
UCHL3-206ENST00000618773 GRIN2BQ13224 1484 aa18.82■□□□□ 0.6
UCHL3-206ENST00000618773 SYNJ1O43426 1573 aa18.81■□□□□ 0.6
UCHL3-206ENST00000618773 BIVM-ERCC5R4GMW8 1640 aa18.78■□□□□ 0.6
UCHL3-206ENST00000618773 SUPT5HO00267 1087 aaKnown RBP18.78■□□□□ 0.6
UCHL3-206ENST00000618773 ABCA10Q8WWZ4 1543 aa18.78■□□□□ 0.6
UCHL3-206ENST00000618773 SYNJ2O15056 1496 aa18.77■□□□□ 0.6
UCHL3-206ENST00000618773 CYB5RLQ6IPT4 315 aa18.76■□□□□ 0.59
UCHL3-206ENST00000618773 GAPVD1Q14C86 1478 aa18.76■□□□□ 0.59
UCHL3-206ENST00000618773 PRR29P0C7W0 189 aa18.73■□□□□ 0.59
UCHL3-206ENST00000618773 TOP2BQ02880 1626 aa18.73■□□□□ 0.59
UCHL3-206ENST00000618773 ADAMTS12P58397 1594 aa18.7■□□□□ 0.58
UCHL3-206ENST00000618773 CHMP7Q8WUX9 453 aaPredicted RBP18.68■□□□□ 0.58
UCHL3-206ENST00000618773 CEP170Q5SW79 1584 aa18.64■□□□□ 0.57
UCHL3-206ENST00000618773 ERCC6L2Q5T890 1561 aa18.63■□□□□ 0.57
UCHL3-206ENST00000618773 CHADLQ6NUI6 762 aa18.62■□□□□ 0.57
UCHL3-206ENST00000618773 WRNQ14191 1432 aaPredicted RBP eCLIP18.62■□□□□ 0.57
UCHL3-206ENST00000618773 GRIN2AQ12879 1464 aa18.62■□□□□ 0.57
UCHL3-206ENST00000618773 EVX2Q03828 476 aa18.6■□□□□ 0.57
UCHL3-206ENST00000618773 SHROOM2Q13796 1616 aa18.56■□□□□ 0.56
UCHL3-206ENST00000618773 NUP160Q12769 1436 aa18.56■□□□□ 0.56
UCHL3-206ENST00000618773 ERICH3Q5RHP9 1530 aa18.54■□□□□ 0.56
UCHL3-206ENST00000618773 FHAD1B1AJZ9 1412 aa18.5■□□□□ 0.55
UCHL3-206ENST00000618773 C19orf67A6NJJ6 358 aa18.49■□□□□ 0.55
UCHL3-206ENST00000618773 SPDYE4A6NLX3 237 aa18.49■□□□□ 0.55
UCHL3-206ENST00000618773 RUSC2Q8N2Y8 1516 aa18.45■□□□□ 0.54
UCHL3-206ENST00000618773 STAG3Q9UJ98 1225 aa18.41■□□□□ 0.54
UCHL3-206ENST00000618773 KIF13AQ9H1H9 1805 aa18.38■□□□□ 0.53
UCHL3-206ENST00000618773 FARP1Q9Y4F1 1045 aaPredicted RBP18.35■□□□□ 0.53
UCHL3-206ENST00000618773 CUL7Q14999 1698 aa18.33■□□□□ 0.52
UCHL3-206ENST00000618773 PRG4Q92954 1404 aaPredicted RBP18.32■□□□□ 0.52
UCHL3-206ENST00000618773 ADCY10Q96PN6 1610 aa18.26■□□□□ 0.51
UCHL3-206ENST00000618773 GABBR2O75899 941 aa18.24■□□□□ 0.51
UCHL3-206ENST00000618773 CD44P16070 742 aaKnown RBP18.24■□□□□ 0.51
UCHL3-206ENST00000618773 IGF1RP08069 1367 aa18.23■□□□□ 0.51
UCHL3-206ENST00000618773 JPH4Q96JJ6 628 aa18.23■□□□□ 0.51
UCHL3-206ENST00000618773 KIF27Q86VH2 1401 aa18.23■□□□□ 0.51
UCHL3-206ENST00000618773 KIAA0586Q9BVV6 1533 aa18.2■□□□□ 0.5
UCHL3-206ENST00000618773 CREBZFQ9NS37 354 aa18.18■□□□□ 0.5
UCHL3-206ENST00000618773 MAPKBP1O60336 1514 aa18.17■□□□□ 0.5
UCHL3-206ENST00000618773 DIP2BQ9P265 1576 aa18.17■□□□□ 0.5
UCHL3-206ENST00000618773 ABCC10Q5T3U5 1492 aa18.11■□□□□ 0.49
UCHL3-206ENST00000618773 IQGAP2Q13576 1575 aa18.1■□□□□ 0.49
UCHL3-206ENST00000618773 CARMIL1Q5VZK9 1371 aa18.09■□□□□ 0.49
UCHL3-206ENST00000618773 TSPOAP1O95153 1857 aa18.09■□□□□ 0.49
UCHL3-206ENST00000618773 CTTNBP2Q8WZ74 1663 aa18.02■□□□□ 0.47
UCHL3-206ENST00000618773 DISP1Q96F81 1524 aa18.02■□□□□ 0.47
UCHL3-206ENST00000618773 ZRANB1Q9UGI0 708 aa18.01■□□□□ 0.47
UCHL3-206ENST00000618773 PPRC1Q5VV67 1664 aaKnown RBP18■□□□□ 0.47
UCHL3-206ENST00000618773 CLCN6P51797 869 aa18■□□□□ 0.47
UCHL3-206ENST00000618773 FAM69CQ0P6D2 419 aa17.99■□□□□ 0.47
UCHL3-206ENST00000618773 PTPRGP23470 1445 aa17.98■□□□□ 0.47
UCHL3-206ENST00000618773 KDM6BO15054 1643 aa17.98■□□□□ 0.47
UCHL3-206ENST00000618773 KIAA0556O60303 1618 aa17.98■□□□□ 0.47
UCHL3-206ENST00000618773 ABCC2Q92887 1545 aa17.97■□□□□ 0.47
UCHL3-206ENST00000618773 UGGT2Q9NYU1 1516 aa17.97■□□□□ 0.47
UCHL3-206ENST00000618773 RAPGEF2Q9Y4G8 1499 aa17.96■□□□□ 0.47
UCHL3-206ENST00000618773 TNIKQ9UKE5 1360 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms