RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 SYNJ2O15056 1496 aa7.47□□□□□ -1.21
SYCP1-210ENST00000618516 CHD1O14646 1710 aa7.46□□□□□ -1.21
SYCP1-210ENST00000618516 PIAS4Q8N2W9 510 aaPredicted RBP7.46□□□□□ -1.21
SYCP1-210ENST00000618516 BIVM-ERCC5R4GMW8 1640 aa7.46□□□□□ -1.21
SYCP1-210ENST00000618516 FHAD1B1AJZ9 1412 aa7.46□□□□□ -1.22
SYCP1-210ENST00000618516 GRIN2AQ12879 1464 aa7.46□□□□□ -1.22
SYCP1-210ENST00000618516 KCNH8Q96L42 1107 aa7.45□□□□□ -1.22
SYCP1-210ENST00000618516 RAPGEF2Q9Y4G8 1499 aa7.45□□□□□ -1.22
SYCP1-210ENST00000618516 MAGI1Q96QZ7 1491 aaPredicted RBP7.44□□□□□ -1.22
SYCP1-210ENST00000618516 PRG4Q92954 1404 aaPredicted RBP7.44□□□□□ -1.22
SYCP1-210ENST00000618516 ERCC6L2Q5T890 1561 aa7.43□□□□□ -1.22
SYCP1-210ENST00000618516 PBRM1Q86U86 1689 aa7.43□□□□□ -1.22
SYCP1-210ENST00000618516 NPM1P06748 294 aaKnown RBP eCLIP7.43□□□□□ -1.22
SYCP1-210ENST00000618516 ABCA5Q8WWZ7 1642 aa7.42□□□□□ -1.22
SYCP1-210ENST00000618516 ARHGEF11O15085 1522 aa7.42□□□□□ -1.22
SYCP1-210ENST00000618516 ADAMTS12P58397 1594 aa7.4□□□□□ -1.23
SYCP1-210ENST00000618516 CEP170Q5SW79 1584 aa7.4□□□□□ -1.23
SYCP1-210ENST00000618516 WDR97A6NE52 1622 aa7.38□□□□□ -1.23
SYCP1-210ENST00000618516 ERICH3Q5RHP9 1530 aa7.38□□□□□ -1.23
SYCP1-210ENST00000618516 FHOD3Q2V2M9 1422 aa7.37□□□□□ -1.23
SYCP1-210ENST00000618516 PTPRGP23470 1445 aa7.37□□□□□ -1.23
SYCP1-210ENST00000618516 RIMBP3CA6NJZ7 1639 aa7.37□□□□□ -1.23
SYCP1-210ENST00000618516 RIMBP3BA6NNM3 1639 aa7.37□□□□□ -1.23
SYCP1-210ENST00000618516 RIMBP3Q9UFD9 1639 aa7.37□□□□□ -1.23
SYCP1-210ENST00000618516 FAM69CQ0P6D2 419 aa7.36□□□□□ -1.23
SYCP1-210ENST00000618516 ARAP1Q96P48 1450 aa7.36□□□□□ -1.23
SYCP1-210ENST00000618516 PLPPR3Q6T4P5 718 aa7.35□□□□□ -1.23
SYCP1-210ENST00000618516 NUP160Q12769 1436 aa7.34□□□□□ -1.23
SYCP1-210ENST00000618516 MYT1LQ9UL68 1186 aa7.34□□□□□ -1.24
SYCP1-210ENST00000618516 CARMIL2Q6F5E8 1435 aa7.33□□□□□ -1.24
SYCP1-210ENST00000618516 KIAA0586Q9BVV6 1533 aa7.33□□□□□ -1.24
SYCP1-210ENST00000618516 PRXQ9BXM0 1461 aa7.33□□□□□ -1.24
SYCP1-210ENST00000618516 PLB1Q6P1J6 1458 aa7.32□□□□□ -1.24
SYCP1-210ENST00000618516 ZNF777Q9ULD5 760 aaPredicted RBP7.31□□□□□ -1.24
SYCP1-210ENST00000618516 GOLGA3Q08378 1498 aa7.31□□□□□ -1.24
SYCP1-210ENST00000618516 IQGAP2Q13576 1575 aa7.3□□□□□ -1.24
SYCP1-210ENST00000618516 CUL7Q14999 1698 aa7.29□□□□□ -1.24
SYCP1-210ENST00000618516 TNIKQ9UKE5 1360 aa7.29□□□□□ -1.24
SYCP1-210ENST00000618516 EEA1Q15075 1411 aa7.29□□□□□ -1.24
SYCP1-210ENST00000618516 CLASP1Q7Z460 1538 aa7.29□□□□□ -1.24
SYCP1-210ENST00000618516 APLP2Q06481 763 aa7.28□□□□□ -1.24
SYCP1-210ENST00000618516 CLIP1P30622 1438 aa7.28□□□□□ -1.24
SYCP1-210ENST00000618516 ITGAEP38570 1179 aa7.27□□□□□ -1.25
SYCP1-210ENST00000618516 DISP1Q96F81 1524 aa7.26□□□□□ -1.25
SYCP1-210ENST00000618516 PLEKHD1A6NEE1 506 aa7.25□□□□□ -1.25
SYCP1-210ENST00000618516 CEP162Q5TB80 1403 aa7.25□□□□□ -1.25
SYCP1-210ENST00000618516 UACAQ9BZF9 1416 aa7.24□□□□□ -1.25
SYCP1-210ENST00000618516 MLECQ14165 292 aa7.22□□□□□ -1.25
SYCP1-210ENST00000618516 ARHGAP35Q9NRY4 1499 aa7.22□□□□□ -1.25
SYCP1-210ENST00000618516 CDK13Q14004 1512 aaKnown RBP7.21□□□□□ -1.25
SYCP1-210ENST00000618516 RAPGEF3O95398 923 aa7.21□□□□□ -1.25
SYCP1-210ENST00000618516 ASXL2Q76L83 1435 aa7.21□□□□□ -1.26
SYCP1-210ENST00000618516 KANK4Q5T7N3 995 aaPredicted RBP7.2□□□□□ -1.26
SYCP1-210ENST00000618516 KIAA0556O60303 1618 aa7.2□□□□□ -1.26
SYCP1-210ENST00000618516 TSPOAP1O95153 1857 aa7.2□□□□□ -1.26
SYCP1-210ENST00000618516 ARID4BQ4LE39 1312 aaPredicted RBP7.19□□□□□ -1.26
SYCP1-210ENST00000618516 CTTNBP2Q8WZ74 1663 aa7.19□□□□□ -1.26
SYCP1-210ENST00000618516 CDK11AQ9UQ88 783 aaPredicted RBP7.18□□□□□ -1.26
SYCP1-210ENST00000618516 MTUS2Q5JR59 1369 aa7.18□□□□□ -1.26
SYCP1-210ENST00000618516 KIF21BO75037 1637 aa7.18□□□□□ -1.26
SYCP1-210ENST00000618516 ADCY10Q96PN6 1610 aa7.18□□□□□ -1.26
SYCP1-210ENST00000618516 FAM50AQ14320 339 aaKnown RBP7.18□□□□□ -1.26
SYCP1-210ENST00000618516 UGGT2Q9NYU1 1516 aa7.17□□□□□ -1.26
SYCP1-210ENST00000618516 ZNF644Q9H582 1327 aaPredicted RBP7.17□□□□□ -1.26
SYCP1-210ENST00000618516 CHIC2Q9UKJ5 165 aa7.16□□□□□ -1.26
SYCP1-210ENST00000618516 ATP10BO94823 1461 aa7.16□□□□□ -1.26
SYCP1-210ENST00000618516 ABCC2Q92887 1545 aa7.16□□□□□ -1.26
SYCP1-210ENST00000618516 SHROOM2Q13796 1616 aa7.16□□□□□ -1.26
SYCP1-210ENST00000618516 NUP153P49790 1475 aaKnown RBP7.15□□□□□ -1.27
SYCP1-210ENST00000618516 HNRNPMP52272 730 aaKnown RBP eCLIP7.15□□□□□ -1.27
SYCP1-210ENST00000618516 AFAP1Q8N556 730 aa7.15□□□□□ -1.27
SYCP1-210ENST00000618516 FMN1Q68DA7 1419 aa7.15□□□□□ -1.27
SYCP1-210ENST00000618516 CD109Q6YHK3 1445 aa7.14□□□□□ -1.27
SYCP1-210ENST00000618516 CFDP1Q9UEE9 299 aaPredicted RBP7.14□□□□□ -1.27
SYCP1-210ENST00000618516 PCF11O94913 1555 aaKnown RBP7.11□□□□□ -1.27
SYCP1-210ENST00000618516 WDR7Q9Y4E6 1490 aa7.11□□□□□ -1.27
SYCP1-210ENST00000618516 EPRSP07814 1512 aaKnown RBP7.11□□□□□ -1.27
SYCP1-210ENST00000618516 RAPGEF6Q8TEU7 1601 aa7.1□□□□□ -1.27
SYCP1-210ENST00000618516 ZCCHC11Q5TAX3 1644 aaKnown RBP7.1□□□□□ -1.27
SYCP1-210ENST00000618516 ABCC10Q5T3U5 1492 aa7.1□□□□□ -1.27
SYCP1-210ENST00000618516 EFCAB2Q5VUJ9 269 aa7.09□□□□□ -1.27
SYCP1-210ENST00000618516 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.09□□□□□ -1.27
SYCP1-210ENST00000618516 CCNB3Q8WWL7 1395 aa7.09□□□□□ -1.28
SYCP1-210ENST00000618516 SAMD9Q5K651 1589 aa7.08□□□□□ -1.28
SYCP1-210ENST00000618516 KDM5BQ9UGL1 1544 aa7.08□□□□□ -1.28
SYCP1-210ENST00000618516 ABCA8O94911 1581 aa7.08□□□□□ -1.28
SYCP1-210ENST00000618516 GGT6Q6P531 493 aa7.08□□□□□ -1.28
SYCP1-210ENST00000618516 VPS8Q8N3P4 1428 aa7.08□□□□□ -1.28
SYCP1-210ENST00000618516 EFCAB5A4FU69 1503 aa7.08□□□□□ -1.28
SYCP1-210ENST00000618516 PPP6R1Q9UPN7 881 aa7.07□□□□□ -1.28
SYCP1-210ENST00000618516 COL17A1Q9UMD9 1497 aaPredicted RBP7.07□□□□□ -1.28
SYCP1-210ENST00000618516 CASKIN1Q8WXD9 1431 aa7.06□□□□□ -1.28
SYCP1-210ENST00000618516 RRP7BPQ9NSQ0 103 aa7.06□□□□□ -1.28
SYCP1-210ENST00000618516 ARHGAP5Q13017 1502 aa7.06□□□□□ -1.28
SYCP1-210ENST00000618516 SCAPERQ9BY12 1400 aa7.05□□□□□ -1.28
SYCP1-210ENST00000618516 CEBPAP49715 358 aaPredicted RBP7.05□□□□□ -1.28
SYCP1-210ENST00000618516 DIP2BQ9P265 1576 aa7.05□□□□□ -1.28
SYCP1-210ENST00000618516 KIF14Q15058 1648 aa7.05□□□□□ -1.28
SYCP1-210ENST00000618516 TROQ12816 1431 aaPredicted RBP7.05□□□□□ -1.28
SYCP1-210ENST00000618516 MAGI3Q5TCQ9 1506 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms