RNA–Protein interactions for RNA: ENST00000618511.4

RDM1-222, Transcript of RAD52 motif containing 1, humanhuman

TSL 1 (best)

Gene RDM1, Length 518 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDM1-222ENST00000618511 ARHGEF11O15085 1522 aa10.41□□□□□ -0.74
RDM1-222ENST00000618511 CLASP1Q7Z460 1538 aa10.4□□□□□ -0.74
RDM1-222ENST00000618511 SYNJ1O43426 1573 aa10.39□□□□□ -0.75
RDM1-222ENST00000618511 ERICH3Q5RHP9 1530 aa10.38□□□□□ -0.75
RDM1-222ENST00000618511 FHAD1B1AJZ9 1412 aa10.36□□□□□ -0.75
RDM1-222ENST00000618511 NUP160Q12769 1436 aa10.36□□□□□ -0.75
RDM1-222ENST00000618511 CHMP7Q8WUX9 453 aaPredicted RBP10.35□□□□□ -0.75
RDM1-222ENST00000618511 RIMBP3CA6NJZ7 1639 aa10.34□□□□□ -0.75
RDM1-222ENST00000618511 RIMBP3BA6NNM3 1639 aa10.34□□□□□ -0.75
RDM1-222ENST00000618511 RIMBP3Q9UFD9 1639 aa10.34□□□□□ -0.75
RDM1-222ENST00000618511 GRIN2AQ12879 1464 aa10.34□□□□□ -0.75
RDM1-222ENST00000618511 ADAMTS12P58397 1594 aa10.33□□□□□ -0.76
RDM1-222ENST00000618511 ARAP1Q96P48 1450 aa10.32□□□□□ -0.76
RDM1-222ENST00000618511 U3KPZ7 1027 aaPredicted RBP10.32□□□□□ -0.76
RDM1-222ENST00000618511 CHD1O14646 1710 aa10.31□□□□□ -0.76
RDM1-222ENST00000618511 FBLN2P98095 1184 aa10.29□□□□□ -0.76
RDM1-222ENST00000618511 PBRM1Q86U86 1689 aa10.28□□□□□ -0.76
RDM1-222ENST00000618511 IGF1RP08069 1367 aa10.27□□□□□ -0.76
RDM1-222ENST00000618511 KIF27Q86VH2 1401 aa10.27□□□□□ -0.77
RDM1-222ENST00000618511 TRIM41Q8WV44 630 aa10.27□□□□□ -0.77
RDM1-222ENST00000618511 SLC4A2P04920 1241 aa10.26□□□□□ -0.77
RDM1-222ENST00000618511 CEP170Q5SW79 1584 aa10.24□□□□□ -0.77
RDM1-222ENST00000618511 SHROOM2Q13796 1616 aa10.24□□□□□ -0.77
RDM1-222ENST00000618511 CYB5RLQ6IPT4 315 aa10.22□□□□□ -0.77
RDM1-222ENST00000618511 KIAA0586Q9BVV6 1533 aa10.2□□□□□ -0.78
RDM1-222ENST00000618511 CUL7Q14999 1698 aa10.19□□□□□ -0.78
RDM1-222ENST00000618511 SPINK5Q9NQ38 1064 aaPredicted RBP10.19□□□□□ -0.78
RDM1-222ENST00000618511 RUSC2Q8N2Y8 1516 aa10.18□□□□□ -0.78
RDM1-222ENST00000618511 CAPN15O75808 1086 aa10.17□□□□□ -0.78
RDM1-222ENST00000618511 CARMIL1Q5VZK9 1371 aa10.16□□□□□ -0.78
RDM1-222ENST00000618511 JPH4Q96JJ6 628 aa10.16□□□□□ -0.78
RDM1-222ENST00000618511 PRG4Q92954 1404 aaPredicted RBP10.15□□□□□ -0.79
RDM1-222ENST00000618511 ERCC6L2Q5T890 1561 aa10.12□□□□□ -0.79
RDM1-222ENST00000618511 RAPGEF2Q9Y4G8 1499 aa10.1□□□□□ -0.79
RDM1-222ENST00000618511 PRXQ9BXM0 1461 aa10.1□□□□□ -0.79
RDM1-222ENST00000618511 DSG3P32926 999 aa10.09□□□□□ -0.79
RDM1-222ENST00000618511 MAPKBP1O60336 1514 aa10.07□□□□□ -0.8
RDM1-222ENST00000618511 UGGT2Q9NYU1 1516 aa10.07□□□□□ -0.8
RDM1-222ENST00000618511 EEA1Q15075 1411 aa10.07□□□□□ -0.8
RDM1-222ENST00000618511 CARMIL2Q6F5E8 1435 aa10.07□□□□□ -0.8
RDM1-222ENST00000618511 TNIKQ9UKE5 1360 aa10.05□□□□□ -0.8
RDM1-222ENST00000618511 IQGAP2Q13576 1575 aa10.05□□□□□ -0.8
RDM1-222ENST00000618511 UHRF1BP1LA0JNW5 1464 aa10.04□□□□□ -0.8
RDM1-222ENST00000618511 DISP1Q96F81 1524 aa10.03□□□□□ -0.8
RDM1-222ENST00000618511 PTPRGP23470 1445 aa10.02□□□□□ -0.81
RDM1-222ENST00000618511 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.02□□□□□ -0.81
RDM1-222ENST00000618511 TRHP20396 242 aaPredicted RBP10.02□□□□□ -0.81
RDM1-222ENST00000618511 APLP2Q06481 763 aa10.02□□□□□ -0.81
RDM1-222ENST00000618511 HNRNPUL2Q1KMD3 747 aaKnown RBP10.02□□□□□ -0.81
RDM1-222ENST00000618511 ABCC10Q5T3U5 1492 aa10.01□□□□□ -0.81
RDM1-222ENST00000618511 ABCC2Q92887 1545 aa10□□□□□ -0.81
RDM1-222ENST00000618511 ADCY10Q96PN6 1610 aa9.99□□□□□ -0.81
RDM1-222ENST00000618511 GOLGA3Q08378 1498 aa9.98□□□□□ -0.81
RDM1-222ENST00000618511 SAMD1Q6SPF0 538 aaPredicted RBP9.98□□□□□ -0.81
RDM1-222ENST00000618511 SLC4A1APQ9BWU0 796 aaKnown RBP9.98□□□□□ -0.81
RDM1-222ENST00000618511 UACAQ9BZF9 1416 aa9.98□□□□□ -0.81
RDM1-222ENST00000618511 ZNF219Q9P2Y4 722 aaPredicted RBP9.97□□□□□ -0.81
RDM1-222ENST00000618511 KDM5BQ9UGL1 1544 aa9.97□□□□□ -0.81
RDM1-222ENST00000618511 CSRNP3Q8WYN3 585 aa9.96□□□□□ -0.82
RDM1-222ENST00000618511 PLB1Q6P1J6 1458 aa9.96□□□□□ -0.82
RDM1-222ENST00000618511 KIAA0556O60303 1618 aa9.96□□□□□ -0.82
RDM1-222ENST00000618511 NPM1P06748 294 aaKnown RBP eCLIP9.95□□□□□ -0.82
RDM1-222ENST00000618511 ABCB7O75027 752 aa9.94□□□□□ -0.82
RDM1-222ENST00000618511 DIP2BQ9P265 1576 aa9.93□□□□□ -0.82
RDM1-222ENST00000618511 MYCNP04198 464 aaPredicted RBP9.92□□□□□ -0.82
RDM1-222ENST00000618511 GLI2P10070 1586 aa9.92□□□□□ -0.82
RDM1-222ENST00000618511 ASXL2Q76L83 1435 aa9.9□□□□□ -0.83
RDM1-222ENST00000618511 ABCA8O94911 1581 aa9.89□□□□□ -0.83
RDM1-222ENST00000618511 FAM69CQ0P6D2 419 aa9.88□□□□□ -0.83
RDM1-222ENST00000618511 KIF21BO75037 1637 aa9.88□□□□□ -0.83
RDM1-222ENST00000618511 SAMD9Q5K651 1589 aa9.87□□□□□ -0.83
RDM1-222ENST00000618511 EPRSP07814 1512 aaKnown RBP9.87□□□□□ -0.83
RDM1-222ENST00000618511 CTTNBP2Q8WZ74 1663 aa9.87□□□□□ -0.83
RDM1-222ENST00000618511 WDR7Q9Y4E6 1490 aa9.85□□□□□ -0.83
RDM1-222ENST00000618511 EFCAB5A4FU69 1503 aa9.84□□□□□ -0.83
RDM1-222ENST00000618511 FOXD4L1Q9NU39 408 aa9.84□□□□□ -0.83
RDM1-222ENST00000618511 KIF13AQ9H1H9 1805 aa9.84□□□□□ -0.83
RDM1-222ENST00000618511 MAGI3Q5TCQ9 1506 aa9.82□□□□□ -0.84
RDM1-222ENST00000618511 TEX14Q8IWB6 1497 aa9.81□□□□□ -0.84
RDM1-222ENST00000618511 FAM9AQ8IZU1 332 aaPredicted RBP9.8□□□□□ -0.84
RDM1-222ENST00000618511 ZCCHC11Q5TAX3 1644 aaKnown RBP9.8□□□□□ -0.84
RDM1-222ENST00000618511 ATP10BO94823 1461 aa9.79□□□□□ -0.84
RDM1-222ENST00000618511 PHLDB1Q86UU1 1377 aa9.79□□□□□ -0.84
RDM1-222ENST00000618511 MAP3K4Q9Y6R4 1608 aa9.78□□□□□ -0.84
RDM1-222ENST00000618511 NUP153P49790 1475 aaKnown RBP9.78□□□□□ -0.84
RDM1-222ENST00000618511 PPRC1Q5VV67 1664 aaKnown RBP9.75□□□□□ -0.85
RDM1-222ENST00000618511 POLA2Q14181 598 aa9.75□□□□□ -0.85
RDM1-222ENST00000618511 KDM6BO15054 1643 aa9.74□□□□□ -0.85
RDM1-222ENST00000618511 FHOD3Q2V2M9 1422 aa9.74□□□□□ -0.85
RDM1-222ENST00000618511 FMN1Q68DA7 1419 aa9.74□□□□□ -0.85
RDM1-222ENST00000618511 CD109Q6YHK3 1445 aa9.74□□□□□ -0.85
RDM1-222ENST00000618511 RAPGEF6Q8TEU7 1601 aa9.74□□□□□ -0.85
RDM1-222ENST00000618511 COL17A1Q9UMD9 1497 aaPredicted RBP9.73□□□□□ -0.85
RDM1-222ENST00000618511 ARAP3Q8WWN8 1544 aa9.73□□□□□ -0.85
RDM1-222ENST00000618511 ZBTB22O15209 634 aa9.73□□□□□ -0.85
RDM1-222ENST00000618511 ARHGAP35Q9NRY4 1499 aa9.72□□□□□ -0.85
RDM1-222ENST00000618511 ABCA9Q8IUA7 1624 aa9.72□□□□□ -0.85
RDM1-222ENST00000618511 ATF5Q9Y2D1 282 aaPredicted RBP9.72□□□□□ -0.85
RDM1-222ENST00000618511 NEO1Q92859 1461 aa9.72□□□□□ -0.85
RDM1-222ENST00000618511 CFAP43Q8NDM7 1665 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms