RNA–Protein interactions for RNA: ENST00000617800.4

ANK3-229, Transcript of ankyrin 3, human

TSL 5

Gene ANK3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ANK3-229	ENST00000617800	PROM2	Q8N271	834 aa		10.9	□□□□□ -0.66
ANK3-229	ENST00000617800	CCDC88B	A6NC98	1476 aa		10.88	□□□□□ -0.67
ANK3-229	ENST00000617800	PIP4P2	Q8N4L2	257 aa		10.87	□□□□□ -0.67
ANK3-229	ENST00000617800	ERCC6	Q03468	1493 aa		10.86	□□□□□ -0.67
ANK3-229	ENST00000617800	THOC2	Q8NI27	1593 aa	Known RBP	10.85	□□□□□ -0.67
ANK3-229	ENST00000617800	SPDYE1	Q8NFV5	336 aa	Predicted RBP	10.84	□□□□□ -0.67
ANK3-229	ENST00000617800	CLEC11A	Q9Y240	323 aa		10.84	□□□□□ -0.67
ANK3-229	ENST00000617800	FXR2	P51116	673 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
ANK3-229	ENST00000617800	CADPS	Q9ULU8	1353 aa		10.8	□□□□□ -0.68
ANK3-229	ENST00000617800	CFTR	P13569	1480 aa		10.8	□□□□□ -0.68
ANK3-229	ENST00000617800	CEP164	Q9UPV0	1460 aa		10.77	□□□□□ -0.69
ANK3-229	ENST00000617800	FANCD2	Q9BXW9	1451 aa		10.76	□□□□□ -0.69
ANK3-229	ENST00000617800	PDS5B	Q9NTI5	1447 aa		10.75	□□□□□ -0.69
ANK3-229	ENST00000617800	MRC2	Q9UBG0	1479 aa		10.73	□□□□□ -0.69
ANK3-229	ENST00000617800	WDR62	O43379	1518 aa		10.72	□□□□□ -0.69
ANK3-229	ENST00000617800	PRKAR2A	P13861	404 aa	Known RBP	10.69	□□□□□ -0.7
ANK3-229	ENST00000617800	URB2	Q14146	1524 aa	Known RBP	10.68	□□□□□ -0.7
ANK3-229	ENST00000617800	PRR29	P0C7W0	189 aa		10.67	□□□□□ -0.7
ANK3-229	ENST00000617800	CUX2	O14529	1486 aa		10.67	□□□□□ -0.7
ANK3-229	ENST00000617800	DNMBP	Q6XZF7	1577 aa		10.65	□□□□□ -0.7
ANK3-229	ENST00000617800	HAX1	O00165	279 aa		10.64	□□□□□ -0.71
ANK3-229	ENST00000617800	ABCC8	Q09428	1581 aa		10.64	□□□□□ -0.71
ANK3-229	ENST00000617800	CHADL	Q6NUI6	762 aa		10.62	□□□□□ -0.71
ANK3-229	ENST00000617800	STAG3	Q9UJ98	1225 aa		10.62	□□□□□ -0.71
ANK3-229	ENST00000617800	FBXO3	Q9UK99	471 aa		10.62	□□□□□ -0.71
ANK3-229	ENST00000617800	TOPBP1	Q92547	1522 aa		10.62	□□□□□ -0.71
ANK3-229	ENST00000617800	CUX1	P39880	1505 aa		10.6	□□□□□ -0.71
ANK3-229	ENST00000617800	BIVM-ERCC5	R4GMW8	1640 aa		10.6	□□□□□ -0.71
ANK3-229	ENST00000617800	SYNJ1	O43426	1573 aa		10.6	□□□□□ -0.71
ANK3-229	ENST00000617800	WDR97	A6NE52	1622 aa		10.59	□□□□□ -0.71
ANK3-229	ENST00000617800	SP7	Q8TDD2	431 aa	Predicted RBP	10.56	□□□□□ -0.72
ANK3-229	ENST00000617800	EIF4G3	O43432	1585 aa	Known RBP	10.55	□□□□□ -0.72
ANK3-229	ENST00000617800	FGD5	Q6ZNL6	1462 aa		10.55	□□□□□ -0.72
ANK3-229	ENST00000617800	TOP2B	Q02880	1626 aa		10.55	□□□□□ -0.72
ANK3-229	ENST00000617800	TARBP1	Q13395	1621 aa	Known RBP	10.55	□□□□□ -0.72
ANK3-229	ENST00000617800	EVX2	Q03828	476 aa		10.53	□□□□□ -0.72
ANK3-229	ENST00000617800	POLA1	P09884	1462 aa	Predicted RBP	10.53	□□□□□ -0.72
ANK3-229	ENST00000617800	PBRM1	Q86U86	1689 aa		10.53	□□□□□ -0.72
ANK3-229	ENST00000617800	WRN	Q14191	1432 aa	Predicted RBP eCLIP	10.5	□□□□□ -0.73
ANK3-229	ENST00000617800	IFT140	Q96RY7	1462 aa		10.49	□□□□□ -0.73
ANK3-229	ENST00000617800	VASP	P50552	380 aa	Predicted RBP	10.49	□□□□□ -0.73
ANK3-229	ENST00000617800	RAD54L2	Q9Y4B4	1467 aa		10.49	□□□□□ -0.73
ANK3-229	ENST00000617800	ZNF608	Q9ULD9	1512 aa	Predicted RBP	10.48	□□□□□ -0.73
ANK3-229	ENST00000617800	CHD1	O14646	1710 aa		10.47	□□□□□ -0.73
ANK3-229	ENST00000617800	C19orf67	A6NJJ6	358 aa		10.46	□□□□□ -0.73
ANK3-229	ENST00000617800	ABCA5	Q8WWZ7	1642 aa		10.46	□□□□□ -0.74
ANK3-229	ENST00000617800	FARP1	Q9Y4F1	1045 aa	Predicted RBP	10.45	□□□□□ -0.74
ANK3-229	ENST00000617800	CREBZF	Q9NS37	354 aa		10.44	□□□□□ -0.74
ANK3-229	ENST00000617800	SOGA1	O94964	1423 aa		10.41	□□□□□ -0.74
ANK3-229	ENST00000617800	ABCA10	Q8WWZ4	1543 aa		10.39	□□□□□ -0.75
ANK3-229	ENST00000617800	AQR	O60306	1485 aa	Known RBP eCLIP	10.39	□□□□□ -0.75
ANK3-229	ENST00000617800	MIER1	Q8N108	512 aa		10.39	□□□□□ -0.75
ANK3-229	ENST00000617800	IFNLR1	Q8IU57	520 aa	Predicted RBP	10.37	□□□□□ -0.75
ANK3-229	ENST00000617800	PLCD3	Q8N3E9	789 aa		10.37	□□□□□ -0.75
ANK3-229	ENST00000617800	TDRD9	Q8NDG6	1382 aa	Known RBP	10.37	□□□□□ -0.75
ANK3-229	ENST00000617800	SNAPC4	Q5SXM2	1469 aa		10.36	□□□□□ -0.75
ANK3-229	ENST00000617800	ADAMTS12	P58397	1594 aa		10.36	□□□□□ -0.75
ANK3-229	ENST00000617800	CD44	P16070	742 aa	Known RBP	10.35	□□□□□ -0.75
ANK3-229	ENST00000617800	GAPVD1	Q14C86	1478 aa		10.35	□□□□□ -0.75
ANK3-229	ENST00000617800	MNX1	P50219	401 aa	Predicted RBP	10.34	□□□□□ -0.75
ANK3-229	ENST00000617800	GRIN2B	Q13224	1484 aa		10.32	□□□□□ -0.76
ANK3-229	ENST00000617800	CUL7	Q14999	1698 aa		10.31	□□□□□ -0.76
ANK3-229	ENST00000617800	PLEKHG5	O94827	1062 aa		10.3	□□□□□ -0.76
ANK3-229	ENST00000617800	MAGI1	Q96QZ7	1491 aa	Predicted RBP	10.3	□□□□□ -0.76
ANK3-229	ENST00000617800	ERICH3	Q5RHP9	1530 aa		10.29	□□□□□ -0.76
ANK3-229	ENST00000617800	GABBR2	O75899	941 aa		10.28	□□□□□ -0.76
ANK3-229	ENST00000617800	ZBTB47	Q9UFB7	747 aa	Predicted RBP	10.27	□□□□□ -0.77
ANK3-229	ENST00000617800	SYNJ2	O15056	1496 aa		10.26	□□□□□ -0.77
ANK3-229	ENST00000617800	TRIM41	Q8WV44	630 aa		10.26	□□□□□ -0.77
ANK3-229	ENST00000617800	RUSC2	Q8N2Y8	1516 aa		10.26	□□□□□ -0.77
ANK3-229	ENST00000617800	KIF27	Q86VH2	1401 aa		10.25	□□□□□ -0.77
ANK3-229	ENST00000617800	NPM1	P06748	294 aa	Known RBP eCLIP	10.25	□□□□□ -0.77
ANK3-229	ENST00000617800	KLHL34	Q8N239	644 aa		10.25	□□□□□ -0.77
ANK3-229	ENST00000617800	CEP170	Q5SW79	1584 aa		10.24	□□□□□ -0.77
ANK3-229	ENST00000617800	ZRANB1	Q9UGI0	708 aa		10.24	□□□□□ -0.77
ANK3-229	ENST00000617800	CTTNBP2	Q8WZ74	1663 aa		10.23	□□□□□ -0.77
ANK3-229	ENST00000617800	GRIN2A	Q12879	1464 aa		10.23	□□□□□ -0.77
ANK3-229	ENST00000617800	CLASP1	Q7Z460	1538 aa		10.23	□□□□□ -0.77
ANK3-229	ENST00000617800	SPOCK2	Q92563	424 aa		10.22	□□□□□ -0.77
ANK3-229	ENST00000617800	FHAD1	B1AJZ9	1412 aa		10.2	□□□□□ -0.78
ANK3-229	ENST00000617800	RIMBP3C	A6NJZ7	1639 aa		10.19	□□□□□ -0.78
ANK3-229	ENST00000617800	RIMBP3B	A6NNM3	1639 aa		10.19	□□□□□ -0.78
ANK3-229	ENST00000617800	RIMBP3	Q9UFD9	1639 aa		10.19	□□□□□ -0.78
ANK3-229	ENST00000617800	NUBP1	P53384	320 aa		10.19	□□□□□ -0.78
ANK3-229	ENST00000617800	PAK3	O75914	559 aa	Predicted RBP	10.18	□□□□□ -0.78
ANK3-229	ENST00000617800	ZNF579	Q8NAF0	562 aa	Known RBP	10.18	□□□□□ -0.78
ANK3-229	ENST00000617800	CHMP7	Q8WUX9	453 aa	Predicted RBP	10.16	□□□□□ -0.78
ANK3-229	ENST00000617800	SHROOM2	Q13796	1616 aa		10.15	□□□□□ -0.78
ANK3-229	ENST00000617800	CLCN6	P51797	869 aa		10.14	□□□□□ -0.79
ANK3-229	ENST00000617800	NUP160	Q12769	1436 aa		10.14	□□□□□ -0.79
ANK3-229	ENST00000617800	IGF1R	P08069	1367 aa		10.14	□□□□□ -0.79
ANK3-229	ENST00000617800	ARHGEF11	O15085	1522 aa		10.13	□□□□□ -0.79
ANK3-229	ENST00000617800	KIF21B	O75037	1637 aa		10.12	□□□□□ -0.79
ANK3-229	ENST00000617800	RASEF	Q8IZ41	740 aa		10.12	□□□□□ -0.79
ANK3-229	ENST00000617800	PHF12	Q96QT6	1004 aa		10.12	□□□□□ -0.79
ANK3-229	ENST00000617800	ERCC6L2	Q5T890	1561 aa		10.12	□□□□□ -0.79
ANK3-229	ENST00000617800	CARMIL1	Q5VZK9	1371 aa		10.12	□□□□□ -0.79
ANK3-229	ENST00000617800	IQGAP2	Q13576	1575 aa		10.11	□□□□□ -0.79
ANK3-229	ENST00000617800	FAM9A	Q8IZU1	332 aa	Predicted RBP	10.11	□□□□□ -0.79
ANK3-229	ENST00000617800	RAPGEF2	Q9Y4G8	1499 aa		10.1	□□□□□ -0.79

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