RNA–Protein interactions for RNA: ENST00000617800.4

ANK3-229, Transcript of ankyrin 3, human

TSL 5

Gene ANK3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ANK3-229	ENST00000617800	AEBP2	Q6ZN18	517 aa	Predicted RBP	20.15	■□□□□ 0.82
ANK3-229	ENST00000617800	CHIC1	Q5VXU3	224 aa		19.28	■□□□□ 0.68
ANK3-229	ENST00000617800	SENP3	Q9H4L4	574 aa	Predicted RBP	17.14	■□□□□ 0.33
ANK3-229	ENST00000617800	PHF23	Q9BUL5	403 aa	Predicted RBP	16.96	■□□□□ 0.31
ANK3-229	ENST00000617800	FOXD1	Q16676	465 aa		15.97	■□□□□ 0.15
ANK3-229	ENST00000617800	PLPPR3	Q6T4P5	718 aa		15.48	■□□□□ 0.07
ANK3-229	ENST00000617800	PPP6R1	Q9UPN7	881 aa		15.08	■□□□□ 0
ANK3-229	ENST00000617800	ADRA2B	P18089	450 aa		15.05	■□□□□ -0
ANK3-229	ENST00000617800	PIAS4	Q8N2W9	510 aa	Predicted RBP	14.97	□□□□□ -0.01
ANK3-229	ENST00000617800	MSH5	O43196	834 aa		14.85	□□□□□ -0.03
ANK3-229	ENST00000617800	NISCH	Q9Y2I1	1504 aa		14.61	□□□□□ -0.07
ANK3-229	ENST00000617800	POTED	Q86YR6	584 aa		14.25	□□□□□ -0.13
ANK3-229	ENST00000617800	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.78	□□□□□ -0.2
ANK3-229	ENST00000617800	SCAF1	Q9H7N4	1312 aa	Known RBP	13.73	□□□□□ -0.21
ANK3-229	ENST00000617800	PPP4R3CP	Q6ZMV5	832 aa		13.63	□□□□□ -0.23
ANK3-229	ENST00000617800	DMRT2	Q9Y5R5	561 aa		13.61	□□□□□ -0.23
ANK3-229	ENST00000617800	KCNA4	P22459	653 aa		13.35	□□□□□ -0.27
ANK3-229	ENST00000617800	CNKSR2	Q8WXI2	1034 aa		13.29	□□□□□ -0.28
ANK3-229	ENST00000617800	NCBP3	Q53F19	620 aa	Known RBP	13.25	□□□□□ -0.29
ANK3-229	ENST00000617800	HOXD11	P31277	338 aa	Predicted RBP	13.18	□□□□□ -0.3
ANK3-229	ENST00000617800	RNF216	Q9NWF9	866 aa	Predicted RBP	13.12	□□□□□ -0.31
ANK3-229	ENST00000617800	DCAF8L1	A6NGE4	600 aa		13.09	□□□□□ -0.31
ANK3-229	ENST00000617800	NPM3	O75607	178 aa	Known RBP	13.09	□□□□□ -0.31
ANK3-229	ENST00000617800	CCDC180	Q9P1Z9	1646 aa		13.07	□□□□□ -0.32
ANK3-229	ENST00000617800	DNAJC5B	Q9UF47	199 aa		12.79	□□□□□ -0.36
ANK3-229	ENST00000617800	RNF39	Q9H2S5	420 aa		12.71	□□□□□ -0.37
ANK3-229	ENST00000617800	SLC4A1AP	Q9BWU0	796 aa	Known RBP	12.69	□□□□□ -0.38
ANK3-229	ENST00000617800	CACNB1	Q02641	598 aa	Predicted RBP	12.68	□□□□□ -0.38
ANK3-229	ENST00000617800	ABCC9	O60706	1549 aa		12.62	□□□□□ -0.39
ANK3-229	ENST00000617800	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	12.58	□□□□□ -0.4
ANK3-229	ENST00000617800	C1QBP	Q07021	282 aa	Known RBP	12.52	□□□□□ -0.41
ANK3-229	ENST00000617800	SLC4A2	P04920	1241 aa		12.39	□□□□□ -0.43
ANK3-229	ENST00000617800		U3KPZ7	1027 aa	Predicted RBP	12.33	□□□□□ -0.44
ANK3-229	ENST00000617800	ZBTB22	O15209	634 aa		12.31	□□□□□ -0.44
ANK3-229	ENST00000617800	EHMT2	Q96KQ7	1210 aa		12.31	□□□□□ -0.44
ANK3-229	ENST00000617800	FOXD4L1	Q9NU39	408 aa		12.27	□□□□□ -0.45
ANK3-229	ENST00000617800	CSRNP3	Q8WYN3	585 aa		12.25	□□□□□ -0.45
ANK3-229	ENST00000617800	ZCCHC6	Q5VYS8	1495 aa	Known RBP	12.22	□□□□□ -0.45
ANK3-229	ENST00000617800	RB1CC1	Q8TDY2	1594 aa		12.18	□□□□□ -0.46
ANK3-229	ENST00000617800	NACAD	O15069	1562 aa		12.15	□□□□□ -0.46
ANK3-229	ENST00000617800	SPINK5	Q9NQ38	1064 aa	Predicted RBP	12.12	□□□□□ -0.47
ANK3-229	ENST00000617800	UNC13A	Q9UPW8	1703 aa		12.11	□□□□□ -0.47
ANK3-229	ENST00000617800	DCAF8L2	P0C7V8	631 aa		12.09	□□□□□ -0.47
ANK3-229	ENST00000617800	CAPN15	O75808	1086 aa		12.08	□□□□□ -0.48
ANK3-229	ENST00000617800	MYCN	P04198	464 aa	Predicted RBP	12.07	□□□□□ -0.48
ANK3-229	ENST00000617800	DCAF1	Q9Y4B6	1507 aa		12.05	□□□□□ -0.48
ANK3-229	ENST00000617800	MYO15B	Q96JP2	1530 aa		12.04	□□□□□ -0.48
ANK3-229	ENST00000617800	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	12.02	□□□□□ -0.49
ANK3-229	ENST00000617800	HNRNPUL2	Q1KMD3	747 aa	Known RBP	12.02	□□□□□ -0.49
ANK3-229	ENST00000617800	APLP2	Q06481	763 aa		11.97	□□□□□ -0.49
ANK3-229	ENST00000617800	SCRIB	Q14160	1630 aa		11.97	□□□□□ -0.49
ANK3-229	ENST00000617800	DSG3	P32926	999 aa		11.96	□□□□□ -0.49
ANK3-229	ENST00000617800	SAMD1	Q6SPF0	538 aa	Predicted RBP	11.96	□□□□□ -0.49
ANK3-229	ENST00000617800	TRH	P20396	242 aa	Predicted RBP	11.94	□□□□□ -0.5
ANK3-229	ENST00000617800	ZNF219	Q9P2Y4	722 aa	Predicted RBP	11.89	□□□□□ -0.51
ANK3-229	ENST00000617800	ATXN8OS	P0DMR3	200 aa		11.86	□□□□□ -0.51
ANK3-229	ENST00000617800	BICRA	Q9NZM4	1560 aa		11.84	□□□□□ -0.51
ANK3-229	ENST00000617800	ABCB7	O75027	752 aa		11.83	□□□□□ -0.52
ANK3-229	ENST00000617800	ATF5	Q9Y2D1	282 aa	Predicted RBP	11.79	□□□□□ -0.52
ANK3-229	ENST00000617800	PABPN1	Q86U42	306 aa	Known RBP eCLIP	11.72	□□□□□ -0.53
ANK3-229	ENST00000617800	POLA2	Q14181	598 aa		11.65	□□□□□ -0.54
ANK3-229	ENST00000617800	SHROOM4	Q9ULL8	1493 aa		11.63	□□□□□ -0.55
ANK3-229	ENST00000617800	EIF4G1	Q04637	1599 aa	Known RBP	11.51	□□□□□ -0.57
ANK3-229	ENST00000617800	CC2D2A	Q9P2K1	1620 aa		11.46	□□□□□ -0.57
ANK3-229	ENST00000617800	SMARCA4	P51532	1647 aa		11.4	□□□□□ -0.58
ANK3-229	ENST00000617800	RBM42	Q9BTD8	480 aa	Known RBP	11.39	□□□□□ -0.59
ANK3-229	ENST00000617800	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.39	□□□□□ -0.59
ANK3-229	ENST00000617800	CECR2	Q9BXF3	1484 aa		11.38	□□□□□ -0.59
ANK3-229	ENST00000617800	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	11.33	□□□□□ -0.6
ANK3-229	ENST00000617800	MROH2B	Q7Z745	1585 aa		11.29	□□□□□ -0.6
ANK3-229	ENST00000617800	MKRN4P	Q13434	485 aa	Predicted RBP	11.29	□□□□□ -0.6
ANK3-229	ENST00000617800	OSCAR	Q8IYS5	282 aa		11.27	□□□□□ -0.61
ANK3-229	ENST00000617800	WIZ	O95785	1651 aa		11.27	□□□□□ -0.61
ANK3-229	ENST00000617800	SMARCA2	P51531	1590 aa		11.24	□□□□□ -0.61
ANK3-229	ENST00000617800	FBLN2	P98095	1184 aa		11.22	□□□□□ -0.61
ANK3-229	ENST00000617800	PEG3	Q9GZU2	1588 aa		11.22	□□□□□ -0.61
ANK3-229	ENST00000617800	ATAD2B	Q9ULI0	1458 aa		11.2	□□□□□ -0.62
ANK3-229	ENST00000617800	HMGXB3	Q12766	1538 aa		11.19	□□□□□ -0.62
ANK3-229	ENST00000617800	POTEH	Q6S545	545 aa		11.19	□□□□□ -0.62
ANK3-229	ENST00000617800	AKT1S1	Q96B36	256 aa		11.17	□□□□□ -0.62
ANK3-229	ENST00000617800	BAZ1B	Q9UIG0	1483 aa	Known RBP	11.17	□□□□□ -0.62
ANK3-229	ENST00000617800	NCAPD3	P42695	1498 aa		11.12	□□□□□ -0.63
ANK3-229	ENST00000617800	RSF1	Q96T23	1441 aa	Predicted RBP	11.12	□□□□□ -0.63
ANK3-229	ENST00000617800	CHRDL2	Q6WN34	429 aa		11.09	□□□□□ -0.63
ANK3-229	ENST00000617800	TOP2A	P11388	1531 aa	Known RBP	11.09	□□□□□ -0.63
ANK3-229	ENST00000617800	REM2	Q8IYK8	340 aa	Predicted RBP	11.08	□□□□□ -0.64
ANK3-229	ENST00000617800	SPDYE2B	A6NHP3	402 aa		11.06	□□□□□ -0.64
ANK3-229	ENST00000617800	SPDYE6	P0CI01	402 aa		11.06	□□□□□ -0.64
ANK3-229	ENST00000617800	SPDYE2	Q495Y8	402 aa		11.06	□□□□□ -0.64
ANK3-229	ENST00000617800	FKBP8	Q14318	412 aa		11.01	□□□□□ -0.65
ANK3-229	ENST00000617800	PRDM2	Q13029	1718 aa		11.01	□□□□□ -0.65
ANK3-229	ENST00000617800	SPDYE4	A6NLX3	237 aa		10.99	□□□□□ -0.65
ANK3-229	ENST00000617800	ZNF692	Q9BU19	519 aa	Predicted RBP	10.98	□□□□□ -0.65
ANK3-229	ENST00000617800	DNAJC5	Q9H3Z4	198 aa		10.98	□□□□□ -0.65
ANK3-229	ENST00000617800	KIF21A	Q7Z4S6	1674 aa		10.98	□□□□□ -0.65
ANK3-229	ENST00000617800	NES	P48681	1621 aa		10.97	□□□□□ -0.65
ANK3-229	ENST00000617800	PITPNM1	O00562	1244 aa		10.96	□□□□□ -0.65
ANK3-229	ENST00000617800	SSUH2	Q9Y2M2	353 aa		10.95	□□□□□ -0.66
ANK3-229	ENST00000617800	LAMC3	Q9Y6N6	1575 aa		10.94	□□□□□ -0.66
ANK3-229	ENST00000617800	SUPT5H	O00267	1087 aa	Known RBP	10.9	□□□□□ -0.66

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