RNA–Protein interactions for RNA: ENST00000616000.4

STRA6-222, Transcript of stimulated by retinoic acid 6, human

APPRIS P1 TSL 2 BASIC

Gene STRA6, Length 2,843 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRA6-222	ENST00000616000	P3H3	Q8IVL6	736 aa		18.85	■□□□□ 0.61
STRA6-222	ENST00000616000	DDX10	Q13206	875 aa	Known RBP	18.84	■□□□□ 0.61
STRA6-222	ENST00000616000	ATP1B4	Q9UN42	357 aa	Predicted RBP	18.83	■□□□□ 0.61
STRA6-222	ENST00000616000	PHLDB1	Q86UU1	1377 aa		18.82	■□□□□ 0.6
STRA6-222	ENST00000616000	BCAN	Q96GW7	911 aa		18.82	■□□□□ 0.6
STRA6-222	ENST00000616000	HIRIP3	Q9BW71	556 aa	Predicted RBP	18.82	■□□□□ 0.6
STRA6-222	ENST00000616000	TIAM1	Q13009	1591 aa		18.81	■□□□□ 0.6
STRA6-222	ENST00000616000	SETD5	Q9C0A6	1442 aa		18.81	■□□□□ 0.6
STRA6-222	ENST00000616000	CARMIL1	Q5VZK9	1371 aa		18.79	■□□□□ 0.6
STRA6-222	ENST00000616000	WDR97	A6NE52	1622 aa		18.79	■□□□□ 0.6
STRA6-222	ENST00000616000	LRRC9	Q6ZRR7	1453 aa		18.77	■□□□□ 0.6
STRA6-222	ENST00000616000	SLC24A1	O60721	1099 aa		18.77	■□□□□ 0.59
STRA6-222	ENST00000616000	FKBP8	Q14318	412 aa		18.71	■□□□□ 0.59
STRA6-222	ENST00000616000	FGD5	Q6ZNL6	1462 aa		18.71	■□□□□ 0.59
STRA6-222	ENST00000616000	ERICH6	Q7L0X2	663 aa		18.7	■□□□□ 0.58
STRA6-222	ENST00000616000	MAP3K1	Q13233	1512 aa		18.7	■□□□□ 0.58
STRA6-222	ENST00000616000	PPP1R15A	O75807	674 aa	Predicted RBP	18.69	■□□□□ 0.58
STRA6-222	ENST00000616000	RBM19	Q9Y4C8	960 aa	Known RBP	18.68	■□□□□ 0.58
STRA6-222	ENST00000616000	PCF11	O94913	1555 aa	Known RBP	18.66	■□□□□ 0.58
STRA6-222	ENST00000616000	TRIM52	Q96A61	297 aa		18.65	■□□□□ 0.58
STRA6-222	ENST00000616000	FHOD3	Q2V2M9	1422 aa		18.65	■□□□□ 0.58
STRA6-222	ENST00000616000	MYT1L	Q9UL68	1186 aa		18.64	■□□□□ 0.58
STRA6-222	ENST00000616000	CADPS	Q9ULU8	1353 aa		18.64	■□□□□ 0.58
STRA6-222	ENST00000616000	FHAD1	B1AJZ9	1412 aa		18.64	■□□□□ 0.57
STRA6-222	ENST00000616000	NEFL	P07196	543 aa		18.63	■□□□□ 0.57
STRA6-222	ENST00000616000	PRDM2	Q13029	1718 aa		18.6	■□□□□ 0.57
STRA6-222	ENST00000616000	CFAP43	Q8NDM7	1665 aa		18.59	■□□□□ 0.57
STRA6-222	ENST00000616000	FANCI	Q9NVI1	1328 aa		18.57	■□□□□ 0.56
STRA6-222	ENST00000616000	ANP32C	O43423	234 aa		18.57	■□□□□ 0.56
STRA6-222	ENST00000616000	RAD54L2	Q9Y4B4	1467 aa		18.56	■□□□□ 0.56
STRA6-222	ENST00000616000	TIMELESS	Q9UNS1	1208 aa		18.55	■□□□□ 0.56
STRA6-222	ENST00000616000	CCER2	I3L3R5	266 aa		18.53	■□□□□ 0.56
STRA6-222	ENST00000616000	TONSL	Q96HA7	1378 aa		18.51	■□□□□ 0.55
STRA6-222	ENST00000616000	FYCO1	Q9BQS8	1478 aa		18.5	■□□□□ 0.55
STRA6-222	ENST00000616000	CASKIN1	Q8WXD9	1431 aa		18.49	■□□□□ 0.55
STRA6-222	ENST00000616000	FANCD2	Q9BXW9	1451 aa		18.49	■□□□□ 0.55
STRA6-222	ENST00000616000	PTPRK	Q15262	1439 aa		18.48	■□□□□ 0.55
STRA6-222	ENST00000616000	FGD6	Q6ZV73	1430 aa		18.47	■□□□□ 0.55
STRA6-222	ENST00000616000	CCDC18	Q5T9S5	1454 aa		18.46	■□□□□ 0.55
STRA6-222	ENST00000616000	MTUS2	Q5JR59	1369 aa		18.44	■□□□□ 0.54
STRA6-222	ENST00000616000	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	18.44	■□□□□ 0.54
STRA6-222	ENST00000616000	MSH5	O43196	834 aa		18.43	■□□□□ 0.54
STRA6-222	ENST00000616000	POLA1	P09884	1462 aa	Predicted RBP	18.43	■□□□□ 0.54
STRA6-222	ENST00000616000	EFCAB5	A4FU69	1503 aa		18.41	■□□□□ 0.54
STRA6-222	ENST00000616000	ABCA10	Q8WWZ4	1543 aa		18.41	■□□□□ 0.54
STRA6-222	ENST00000616000	ERICH6B	Q5W0A0	696 aa		18.4	■□□□□ 0.54
STRA6-222	ENST00000616000	AQR	O60306	1485 aa	Known RBP eCLIP	18.4	■□□□□ 0.54
STRA6-222	ENST00000616000	UACA	Q9BZF9	1416 aa		18.39	■□□□□ 0.53
STRA6-222	ENST00000616000	TOPBP1	Q92547	1522 aa		18.39	■□□□□ 0.53
STRA6-222	ENST00000616000	IRX6	P78412	446 aa	Predicted RBP	18.38	■□□□□ 0.53
STRA6-222	ENST00000616000	HFM1	A2PYH4	1435 aa		18.38	■□□□□ 0.53
STRA6-222	ENST00000616000	SNAPC4	Q5SXM2	1469 aa		18.38	■□□□□ 0.53
STRA6-222	ENST00000616000	FMN1	Q68DA7	1419 aa		18.38	■□□□□ 0.53
STRA6-222	ENST00000616000	NES	P48681	1621 aa		18.38	■□□□□ 0.53
STRA6-222	ENST00000616000	DNMBP	Q6XZF7	1577 aa		18.37	■□□□□ 0.53
STRA6-222	ENST00000616000	HNRNPU	Q00839	825 aa	Known RBP eCLIP	18.37	■□□□□ 0.53
STRA6-222	ENST00000616000	PTPN23	Q9H3S7	1636 aa		18.37	■□□□□ 0.53
STRA6-222	ENST00000616000	NAIP	Q13075	1403 aa		18.37	■□□□□ 0.53
STRA6-222	ENST00000616000	RRP7BP	Q9NSQ0	103 aa		18.36	■□□□□ 0.53
STRA6-222	ENST00000616000	CHIC2	Q9UKJ5	165 aa		18.36	■□□□□ 0.53
STRA6-222	ENST00000616000	CDK11A	Q9UQ88	783 aa	Predicted RBP	18.36	■□□□□ 0.53
STRA6-222	ENST00000616000	CTTNBP2	Q8WZ74	1663 aa		18.35	■□□□□ 0.53
STRA6-222	ENST00000616000	CC2D2A	Q9P2K1	1620 aa		18.34	■□□□□ 0.53
STRA6-222	ENST00000616000	NCOA2	Q15596	1464 aa		18.34	■□□□□ 0.53
STRA6-222	ENST00000616000	TDRD9	Q8NDG6	1382 aa	Known RBP	18.33	■□□□□ 0.52
STRA6-222	ENST00000616000	LRRIQ1	Q96JM4	1722 aa		18.31	■□□□□ 0.52
STRA6-222	ENST00000616000	MYOM3	Q5VTT5	1437 aa		18.31	■□□□□ 0.52
STRA6-222	ENST00000616000	KDM5B	Q9UGL1	1544 aa		18.31	■□□□□ 0.52
STRA6-222	ENST00000616000	HSPA5	P11021	654 aa	Known RBP	18.31	■□□□□ 0.52
STRA6-222	ENST00000616000	CUL7	Q14999	1698 aa		18.3	■□□□□ 0.52
STRA6-222	ENST00000616000	WASHC2A	Q641Q2	1341 aa		18.3	■□□□□ 0.52
STRA6-222	ENST00000616000	CCDC184	Q52MB2	194 aa		18.27	■□□□□ 0.52
STRA6-222	ENST00000616000	ARID3C	A6NKF2	412 aa		18.25	■□□□□ 0.51
STRA6-222	ENST00000616000	FOXD1	Q16676	465 aa		18.25	■□□□□ 0.51
STRA6-222	ENST00000616000	GRIN2B	Q13224	1484 aa		18.25	■□□□□ 0.51
STRA6-222	ENST00000616000	DENND4B	O75064	1496 aa	Predicted RBP	18.22	■□□□□ 0.51
STRA6-222	ENST00000616000	MAGI3	Q5TCQ9	1506 aa		18.22	■□□□□ 0.51
STRA6-222	ENST00000616000	SAMD9	Q5K651	1589 aa		18.22	■□□□□ 0.51
STRA6-222	ENST00000616000	URB2	Q14146	1524 aa	Known RBP	18.22	■□□□□ 0.51
STRA6-222	ENST00000616000	SUPT6H	Q7KZ85	1726 aa	Known RBP	18.21	■□□□□ 0.51
STRA6-222	ENST00000616000	C11orf95	C9JLR9	678 aa	Predicted RBP	18.21	■□□□□ 0.51
STRA6-222	ENST00000616000	EIF4G2	P78344	907 aa	Known RBP eCLIP	18.2	■□□□□ 0.5
STRA6-222	ENST00000616000	L3MBTL2	Q969R5	705 aa		18.19	■□□□□ 0.5
STRA6-222	ENST00000616000	KDM6B	O15054	1643 aa		18.19	■□□□□ 0.5
STRA6-222	ENST00000616000	DEK	P35659	375 aa	Known RBP	18.18	■□□□□ 0.5
STRA6-222	ENST00000616000	EHBP1L1	Q8N3D4	1523 aa		18.18	■□□□□ 0.5
STRA6-222	ENST00000616000	UGGT2	Q9NYU1	1516 aa		18.18	■□□□□ 0.5
STRA6-222	ENST00000616000	GAPVD1	Q14C86	1478 aa		18.18	■□□□□ 0.5
STRA6-222	ENST00000616000	FAM9B	Q8IZU0	186 aa		18.18	■□□□□ 0.5
STRA6-222	ENST00000616000	MPHOSPH9	Q99550	1183 aa		18.18	■□□□□ 0.5
STRA6-222	ENST00000616000	PPP4R2	Q9NY27	417 aa		18.16	■□□□□ 0.5
STRA6-222	ENST00000616000	ABCA5	Q8WWZ7	1642 aa		18.13	■□□□□ 0.49
STRA6-222	ENST00000616000	ARHGEF11	O15085	1522 aa		18.13	■□□□□ 0.49
STRA6-222	ENST00000616000	CNTLN	Q9NXG0	1405 aa		18.12	■□□□□ 0.49
STRA6-222	ENST00000616000	PRKRIP1	Q9H875	184 aa	Predicted RBP	18.12	■□□□□ 0.49
STRA6-222	ENST00000616000	NBPF8	Q3BBV2	869 aa		18.11	■□□□□ 0.49
STRA6-222	ENST00000616000	MRS2	Q9HD23	443 aa		18.11	■□□□□ 0.49
STRA6-222	ENST00000616000	CNGB1	Q14028	1251 aa	Predicted RBP	18.1	■□□□□ 0.49
STRA6-222	ENST00000616000	THOC2	Q8NI27	1593 aa	Known RBP	18.1	■□□□□ 0.49
STRA6-222	ENST00000616000	CCDC7	Q96M83	1385 aa		18.09	■□□□□ 0.49

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