RNA–Protein interactions for RNA: ENST00000613942.2

CRNDE-212, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 5 BASIC

Gene CRNDE, Length 2,601 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-212ENST00000613942 TNIKQ9UKE5 1360 aa9.51□□□□□ -0.89
CRNDE-212ENST00000613942 WDR62O43379 1518 aa9.5□□□□□ -0.89
CRNDE-212ENST00000613942 THOC2Q8NI27 1593 aaKnown RBP9.49□□□□□ -0.89
CRNDE-212ENST00000613942 RANGAP1P46060 587 aaPredicted RBP9.49□□□□□ -0.89
CRNDE-212ENST00000613942 TRIM26Q12899 539 aaPredicted RBP9.49□□□□□ -0.89
CRNDE-212ENST00000613942 TARBP1Q13395 1621 aaKnown RBP9.48□□□□□ -0.89
CRNDE-212ENST00000613942 CEP162Q5TB80 1403 aa9.48□□□□□ -0.89
CRNDE-212ENST00000613942 WDR97A6NE52 1622 aa9.48□□□□□ -0.89
CRNDE-212ENST00000613942 CARMIL1Q5VZK9 1371 aa9.47□□□□□ -0.89
CRNDE-212ENST00000613942 AQRO60306 1485 aaKnown RBP eCLIP9.46□□□□□ -0.892e-8■■■■□ 22.7
CRNDE-212ENST00000613942 GAPVD1Q14C86 1478 aa9.46□□□□□ -0.9
CRNDE-212ENST00000613942 ERICH3Q5RHP9 1530 aa9.45□□□□□ -0.9
CRNDE-212ENST00000613942 ZNF608Q9ULD9 1512 aaPredicted RBP9.45□□□□□ -0.9
CRNDE-212ENST00000613942 ABCA5Q8WWZ7 1642 aa9.45□□□□□ -0.9
CRNDE-212ENST00000613942 IFT140Q96RY7 1462 aa9.43□□□□□ -0.9
CRNDE-212ENST00000613942 NPM3O75607 178 aaKnown RBP9.42□□□□□ -0.9
CRNDE-212ENST00000613942 CLIP1P30622 1438 aa9.41□□□□□ -0.9
CRNDE-212ENST00000613942 C1QBPQ07021 282 aaKnown RBP9.39□□□□□ -0.91
CRNDE-212ENST00000613942 CUL7Q14999 1698 aa9.38□□□□□ -0.91
CRNDE-212ENST00000613942 NCBP3Q53F19 620 aaKnown RBP9.37□□□□□ -0.91
CRNDE-212ENST00000613942 GRIN2BQ13224 1484 aa9.37□□□□□ -0.91
CRNDE-212ENST00000613942 EIF4G3O43432 1585 aaKnown RBP9.37□□□□□ -0.91
CRNDE-212ENST00000613942 PBRM1Q86U86 1689 aa9.37□□□□□ -0.91
CRNDE-212ENST00000613942 SNAPC4Q5SXM2 1469 aa9.34□□□□□ -0.91
CRNDE-212ENST00000613942 FHAD1B1AJZ9 1412 aa9.34□□□□□ -0.91
CRNDE-212ENST00000613942 ADAMTS12P58397 1594 aa9.33□□□□□ -0.92
CRNDE-212ENST00000613942 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.33□□□□□ -0.92
CRNDE-212ENST00000613942 ARAP1Q96P48 1450 aa9.32□□□□□ -0.92
CRNDE-212ENST00000613942 ARHGAP35Q9NRY4 1499 aa9.32□□□□□ -0.92
CRNDE-212ENST00000613942 P3H3Q8IVL6 736 aa9.32□□□□□ -0.92
CRNDE-212ENST00000613942 FBLN2P98095 1184 aa9.31□□□□□ -0.92
CRNDE-212ENST00000613942 VPS8Q8N3P4 1428 aa9.3□□□□□ -0.92
CRNDE-212ENST00000613942 CHMP7Q8WUX9 453 aaPredicted RBP9.29□□□□□ -0.92
CRNDE-212ENST00000613942 CTTNBP2Q8WZ74 1663 aa9.28□□□□□ -0.92
CRNDE-212ENST00000613942 MAGI1Q96QZ7 1491 aaPredicted RBP9.28□□□□□ -0.92
CRNDE-212ENST00000613942 GRIN2AQ12879 1464 aa9.27□□□□□ -0.93
CRNDE-212ENST00000613942 SYNJ2O15056 1496 aa9.26□□□□□ -0.93
CRNDE-212ENST00000613942 FHOD3Q2V2M9 1422 aa9.26□□□□□ -0.93
CRNDE-212ENST00000613942 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.26□□□□□ -0.93
CRNDE-212ENST00000613942 APLP2Q06481 763 aa9.22□□□□□ -0.93
CRNDE-212ENST00000613942 IQGAP2Q13576 1575 aa9.22□□□□□ -0.93
CRNDE-212ENST00000613942 CEP170Q5SW79 1584 aa9.22□□□□□ -0.93
CRNDE-212ENST00000613942 KCNA4P22459 653 aa9.22□□□□□ -0.93
CRNDE-212ENST00000613942 EFCAB5A4FU69 1503 aa9.21□□□□□ -0.93
CRNDE-212ENST00000613942 ATP1B4Q9UN42 357 aaPredicted RBP9.21□□□□□ -0.93
CRNDE-212ENST00000613942 KIAA0586Q9BVV6 1533 aa9.21□□□□□ -0.94
CRNDE-212ENST00000613942 KANK4Q5T7N3 995 aaPredicted RBP9.2□□□□□ -0.94
CRNDE-212ENST00000613942 SAMD9Q5K651 1589 aa9.2□□□□□ -0.94
CRNDE-212ENST00000613942 NUP160Q12769 1436 aa9.19□□□□□ -0.94
CRNDE-212ENST00000613942 PCF11O94913 1555 aaKnown RBP9.18□□□□□ -0.94
CRNDE-212ENST00000613942 U3KPZ7 1027 aaPredicted RBP9.18□□□□□ -0.94
CRNDE-212ENST00000613942 JPH4Q96JJ6 628 aa9.17□□□□□ -0.94
CRNDE-212ENST00000613942 UGGT2Q9NYU1 1516 aa9.17□□□□□ -0.94
CRNDE-212ENST00000613942 CHD1O14646 1710 aa9.17□□□□□ -0.94
CRNDE-212ENST00000613942 DISP1Q96F81 1524 aa9.16□□□□□ -0.94
CRNDE-212ENST00000613942 FMN1Q68DA7 1419 aa9.16□□□□□ -0.94
CRNDE-212ENST00000613942 SLC24A1O60721 1099 aa9.16□□□□□ -0.94
CRNDE-212ENST00000613942 CCER1Q8TC90 406 aaPredicted RBP9.16□□□□□ -0.94
CRNDE-212ENST00000613942 SPINK5Q9NQ38 1064 aaPredicted RBP9.15□□□□□ -0.95
CRNDE-212ENST00000613942 CASKIN1Q8WXD9 1431 aa9.14□□□□□ -0.95
CRNDE-212ENST00000613942 ZEB1P37275 1124 aaPredicted RBP9.14□□□□□ -0.95
CRNDE-212ENST00000613942 KIAA0556O60303 1618 aa9.13□□□□□ -0.95
CRNDE-212ENST00000613942 ARID3CA6NKF2 412 aa9.13□□□□□ -0.95
CRNDE-212ENST00000613942 FYCO1Q9BQS8 1478 aa9.13□□□□□ -0.95
CRNDE-212ENST00000613942 TIAM1Q13009 1591 aa9.13□□□□□ -0.95
CRNDE-212ENST00000613942 ERICH6Q7L0X2 663 aa9.11□□□□□ -0.95
CRNDE-212ENST00000613942 LRRC9Q6ZRR7 1453 aa9.1□□□□□ -0.95
CRNDE-212ENST00000613942 PRG4Q92954 1404 aaPredicted RBP9.1□□□□□ -0.95
CRNDE-212ENST00000613942 MAP3K1Q13233 1512 aa9.09□□□□□ -0.95
CRNDE-212ENST00000613942 CARMIL2Q6F5E8 1435 aa9.09□□□□□ -0.95
CRNDE-212ENST00000613942 LRRIQ1Q96JM4 1722 aa9.09□□□□□ -0.95
CRNDE-212ENST00000613942 HNRNPUL2Q1KMD3 747 aaKnown RBP9.08□□□□□ -0.96
CRNDE-212ENST00000613942 CFAP43Q8NDM7 1665 aa9.08□□□□□ -0.96
CRNDE-212ENST00000613942 PLB1Q6P1J6 1458 aa9.07□□□□□ -0.96
CRNDE-212ENST00000613942 ERCC6L2Q5T890 1561 aa9.07□□□□□ -0.96
CRNDE-212ENST00000613942 CDK13Q14004 1512 aaKnown RBP9.06□□□□□ -0.96
CRNDE-212ENST00000613942 SLC4A2P04920 1241 aa9.06□□□□□ -0.96
CRNDE-212ENST00000613942 EPRSP07814 1512 aaKnown RBP9.06□□□□□ -0.96
CRNDE-212ENST00000613942 MTUS2Q5JR59 1369 aa9.05□□□□□ -0.96
CRNDE-212ENST00000613942 PHLDB1Q86UU1 1377 aa9.05□□□□□ -0.96
CRNDE-212ENST00000613942 CLASP1Q7Z460 1538 aa9.05□□□□□ -0.96
CRNDE-212ENST00000613942 HECW1Q76N89 1606 aa9.05□□□□□ -0.96
CRNDE-212ENST00000613942 NUP153P49790 1475 aaKnown RBP9.05□□□□□ -0.96
CRNDE-212ENST00000613942 CAPN15O75808 1086 aa9.04□□□□□ -0.96
CRNDE-212ENST00000613942 MAGI3Q5TCQ9 1506 aa9.04□□□□□ -0.96
CRNDE-212ENST00000613942 SHROOM2Q13796 1616 aa9.04□□□□□ -0.96
CRNDE-212ENST00000613942 RAPGEF6Q8TEU7 1601 aa9.04□□□□□ -0.96
CRNDE-212ENST00000613942 PTPRGP23470 1445 aa9.04□□□□□ -0.96
CRNDE-212ENST00000613942 CCDC18Q5T9S5 1454 aa9.03□□□□□ -0.96
CRNDE-212ENST00000613942 RRBP1Q9P2E9 1410 aaKnown RBP9.02□□□□□ -0.97
CRNDE-212ENST00000613942 OSCARQ8IYS5 282 aa9.01□□□□□ -0.97
CRNDE-212ENST00000613942 CCNB3Q8WWL7 1395 aa9.01□□□□□ -0.97
CRNDE-212ENST00000613942 DSG3P32926 999 aa9.01□□□□□ -0.97
CRNDE-212ENST00000613942 ITGAEP38570 1179 aa9.01□□□□□ -0.97
CRNDE-212ENST00000613942 ABCA8O94911 1581 aa9□□□□□ -0.97
CRNDE-212ENST00000613942 NCOA2Q15596 1464 aa8.99□□□□□ -0.97
CRNDE-212ENST00000613942 EHBP1L1Q8N3D4 1523 aa8.99□□□□□ -0.97
CRNDE-212ENST00000613942 FAM50AQ14320 339 aaKnown RBP8.99□□□□□ -0.97
CRNDE-212ENST00000613942 ATP10BO94823 1461 aa8.98□□□□□ -0.97
CRNDE-212ENST00000613942 UACAQ9BZF9 1416 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms