RNA–Protein interactions for RNA: ENST00000613626.4

CDK13-207, Transcript of cyclin dependent kinase 13, humanhuman

TSL 5 BASIC

Gene CDK13, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-207ENST00000613626 CDK11AQ9UQ88 783 aaPredicted RBP27.39■■□□□ 1.98
CDK13-207ENST00000613626 HMGXB3Q12766 1538 aa27.38■■□□□ 1.97
CDK13-207ENST00000613626 BIVM-ERCC5R4GMW8 1640 aa27.37■■□□□ 1.97
CDK13-207ENST00000613626 CFTRP13569 1480 aa27.36■■□□□ 1.97
CDK13-207ENST00000613626 KIF27Q86VH2 1401 aa27.36■■□□□ 1.97
CDK13-207ENST00000613626 ARAP1Q96P48 1450 aa27.34■■□□□ 1.97
CDK13-207ENST00000613626 HIRIP3Q9BW71 556 aaPredicted RBP27.3■■□□□ 1.96
CDK13-207ENST00000613626 RTN4Q9NQC3 1192 aaKnown RBP27.27■■□□□ 1.96
CDK13-207ENST00000613626 MYT1LQ9UL68 1186 aa27.24■■□□□ 1.95
CDK13-207ENST00000613626 P3H3Q8IVL6 736 aa27.23■■□□□ 1.95
CDK13-207ENST00000613626 CUX2O14529 1486 aa27.23■■□□□ 1.95
CDK13-207ENST00000613626 ERICH3Q5RHP9 1530 aa27.21■■□□□ 1.95
CDK13-207ENST00000613626 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.21■■□□□ 1.95
CDK13-207ENST00000613626 IGF1RP08069 1367 aa27.18■■□□□ 1.94
CDK13-207ENST00000613626 CADPSQ9ULU8 1353 aa27.17■■□□□ 1.94
CDK13-207ENST00000613626 ATP1B4Q9UN42 357 aaPredicted RBP27.17■■□□□ 1.94
CDK13-207ENST00000613626 IL27Q8NEV9 243 aa27.15■■□□□ 1.94
CDK13-207ENST00000613626 ARHGAP35Q9NRY4 1499 aa27.14■■□□□ 1.94
CDK13-207ENST00000613626 PAK3O75914 559 aaPredicted RBP27.14■■□□□ 1.93
CDK13-207ENST00000613626 FGD5Q6ZNL6 1462 aa27.06■■□□□ 1.92
CDK13-207ENST00000613626 CARMIL1Q5VZK9 1371 aa27.06■■□□□ 1.92
CDK13-207ENST00000613626 ANP32CO43423 234 aa27.06■■□□□ 1.92
CDK13-207ENST00000613626 NOP58Q9Y2X3 529 aaKnown RBP27.06■■□□□ 1.92
CDK13-207ENST00000613626 PPP1R15AO75807 674 aaPredicted RBP27.02■■□□□ 1.92
CDK13-207ENST00000613626 HNRNPUQ00839 825 aaKnown RBP eCLIP27.01■■□□□ 1.91
CDK13-207ENST00000613626 CC2D2AQ9P2K1 1620 aa26.99■■□□□ 1.91
CDK13-207ENST00000613626 B4GALNT3Q6L9W6 998 aa26.98■■□□□ 1.91
CDK13-207ENST00000613626 SIN3AQ96ST3 1273 aa26.97■■□□□ 1.91
CDK13-207ENST00000613626 RAD54L2Q9Y4B4 1467 aa26.96■■□□□ 1.91
CDK13-207ENST00000613626 CCNB3Q8WWL7 1395 aa26.96■■□□□ 1.91
CDK13-207ENST00000613626 NESP48681 1621 aa26.96■■□□□ 1.91
CDK13-207ENST00000613626 DNAJC5BQ9UF47 199 aa26.95■■□□□ 1.9
CDK13-207ENST00000613626 CCER2I3L3R5 266 aa26.94■■□□□ 1.9
CDK13-207ENST00000613626 ERICH6BQ5W0A0 696 aa26.94■■□□□ 1.9
CDK13-207ENST00000613626 FANCD2Q9BXW9 1451 aa26.92■■□□□ 1.9
CDK13-207ENST00000613626 FAM50AQ14320 339 aaKnown RBP26.91■■□□□ 1.9
CDK13-207ENST00000613626 RTL5Q5HYW3 569 aaPredicted RBP26.91■■□□□ 1.9
CDK13-207ENST00000613626 RRBP1Q9P2E9 1410 aaKnown RBP26.9■■□□□ 1.9
CDK13-207ENST00000613626 WDR97A6NE52 1622 aa26.88■■□□□ 1.89
CDK13-207ENST00000613626 PPP4R2Q9NY27 417 aa26.86■■□□□ 1.89
CDK13-207ENST00000613626 PHLDB1Q86UU1 1377 aa26.79■■□□□ 1.88
CDK13-207ENST00000613626 UBE2Q2Q8WVN8 375 aa26.79■■□□□ 1.88
CDK13-207ENST00000613626 FHOD3Q2V2M9 1422 aa26.79■■□□□ 1.88
CDK13-207ENST00000613626 RAB3GAP2Q9H2M9 1393 aa26.78■■□□□ 1.88
CDK13-207ENST00000613626 POLA1P09884 1462 aaPredicted RBP26.73■■□□□ 1.87
CDK13-207ENST00000613626 PRDM2Q13029 1718 aa26.73■■□□□ 1.87
CDK13-207ENST00000613626 MAPKBP1O60336 1514 aa26.73■■□□□ 1.87
CDK13-207ENST00000613626 TDRD9Q8NDG6 1382 aaKnown RBP26.72■■□□□ 1.87
CDK13-207ENST00000613626 EIF5BO60841 1220 aaKnown RBP26.72■■□□□ 1.87
CDK13-207ENST00000613626 TIAM1Q13009 1591 aa26.69■■□□□ 1.86
CDK13-207ENST00000613626 LRRC9Q6ZRR7 1453 aa26.69■■□□□ 1.86
CDK13-207ENST00000613626 TOPBP1Q92547 1522 aa26.69■■□□□ 1.86
CDK13-207ENST00000613626 ZBTB47Q9UFB7 747 aaPredicted RBP26.67■■□□□ 1.86
CDK13-207ENST00000613626 ANP32AP39687 249 aaKnown RBP26.65■■□□□ 1.86
CDK13-207ENST00000613626 IPO9Q96P70 1041 aaKnown RBP26.63■■□□□ 1.85
CDK13-207ENST00000613626 LAS1LQ9Y4W2 734 aaKnown RBP26.6■■□□□ 1.85
CDK13-207ENST00000613626 PCF11O94913 1555 aaKnown RBP26.59■■□□□ 1.85
CDK13-207ENST00000613626 DNMBPQ6XZF7 1577 aa26.59■■□□□ 1.85
CDK13-207ENST00000613626 FHAD1B1AJZ9 1412 aa26.59■■□□□ 1.85
CDK13-207ENST00000613626 ABCA10Q8WWZ4 1543 aa26.58■■□□□ 1.84
CDK13-207ENST00000613626 SETD5Q9C0A6 1442 aa26.57■■□□□ 1.84
CDK13-207ENST00000613626 NPM2Q86SE8 214 aaKnown RBP26.56■■□□□ 1.84
CDK13-207ENST00000613626 CCDC184Q52MB2 194 aa26.55■■□□□ 1.84
CDK13-207ENST00000613626 URB2Q14146 1524 aaKnown RBP26.54■■□□□ 1.84
CDK13-207ENST00000613626 ARID3CA6NKF2 412 aa26.54■■□□□ 1.84
CDK13-207ENST00000613626 FAM9BQ8IZU0 186 aa26.52■■□□□ 1.84
CDK13-207ENST00000613626 NEFMP07197 916 aa26.5■■□□□ 1.83
CDK13-207ENST00000613626 BRPF3Q9ULD4 1205 aa26.5■■□□□ 1.83
CDK13-207ENST00000613626 MAP3K1Q13233 1512 aa26.45■■□□□ 1.82
CDK13-207ENST00000613626 SENP3-EIF4A1A0A087X0R7 540 aa26.42■■□□□ 1.82
CDK13-207ENST00000613626 MTUS2Q5JR59 1369 aa26.41■■□□□ 1.82
CDK13-207ENST00000613626 WASHC2AQ641Q2 1341 aa26.41■■□□□ 1.82
CDK13-207ENST00000613626 CASKIN1Q8WXD9 1431 aa26.4■■□□□ 1.82
CDK13-207ENST00000613626 GAPVD1Q14C86 1478 aa26.37■■□□□ 1.81
CDK13-207ENST00000613626 FYCO1Q9BQS8 1478 aa26.36■■□□□ 1.81
CDK13-207ENST00000613626 TIMELESSQ9UNS1 1208 aa26.35■■□□□ 1.81
CDK13-207ENST00000613626 CHIC2Q9UKJ5 165 aa26.34■■□□□ 1.81
CDK13-207ENST00000613626 CFAP43Q8NDM7 1665 aa26.32■■□□□ 1.8
CDK13-207ENST00000613626 CNGB1Q14028 1251 aaPredicted RBP26.31■■□□□ 1.8
CDK13-207ENST00000613626 PTPRKQ15262 1439 aa26.31■■□□□ 1.8
CDK13-207ENST00000613626 FMN1Q68DA7 1419 aa26.31■■□□□ 1.8
CDK13-207ENST00000613626 PDS5BQ9NTI5 1447 aa26.3■■□□□ 1.8
CDK13-207ENST00000613626 TONSLQ96HA7 1378 aa26.3■■□□□ 1.8
CDK13-207ENST00000613626 FGD6Q6ZV73 1430 aa26.29■■□□□ 1.8
CDK13-207ENST00000613626 EFCAB5A4FU69 1503 aa26.28■■□□□ 1.8
CDK13-207ENST00000613626 MRS2Q9HD23 443 aa26.28■■□□□ 1.8
CDK13-207ENST00000613626 SNAPC4Q5SXM2 1469 aa26.27■■□□□ 1.8
CDK13-207ENST00000613626 RRP7BPQ9NSQ0 103 aa26.27■■□□□ 1.8
CDK13-207ENST00000613626 AKNAQ7Z591 1439 aa26.27■■□□□ 1.8
CDK13-207ENST00000613626 CUL7Q14999 1698 aa26.27■■□□□ 1.8
CDK13-207ENST00000613626 LAMC3Q9Y6N6 1575 aa26.27■■□□□ 1.8
CDK13-207ENST00000613626 AQRO60306 1485 aaKnown RBP eCLIP26.26■■□□□ 1.88e-6■■■■□ 23.2
CDK13-207ENST00000613626 PKNOX2Q96KN3 472 aa26.24■■□□□ 1.79
CDK13-207ENST00000613626 WASHC2CQ9Y4E1 1318 aa26.23■■□□□ 1.79
CDK13-207ENST00000613626 CTTNBP2Q8WZ74 1663 aa26.23■■□□□ 1.79
CDK13-207ENST00000613626 C11orf95C9JLR9 678 aaPredicted RBP26.22■■□□□ 1.79
CDK13-207ENST00000613626 ZBED9Q6R2W3 1325 aa26.19■■□□□ 1.78
CDK13-207ENST00000613626 NCOA2Q15596 1464 aa26.18■■□□□ 1.78
CDK13-207ENST00000613626 KIF21AQ7Z4S6 1674 aa26.17■■□□□ 1.78
CDK13-207ENST00000613626 ABCA5Q8WWZ7 1642 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms