RNA–Protein interactions for RNA: ENST00000611031.4

CPEB1-207, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CPEB1, Length 3,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-207ENST00000611031 CUX1P39880 1505 aa14.15□□□□□ -0.14
CPEB1-207ENST00000611031 TOP2BQ02880 1626 aa14.13□□□□□ -0.15
CPEB1-207ENST00000611031 CLIP1P30622 1438 aa14.13□□□□□ -0.15
CPEB1-207ENST00000611031 TRIM52Q96A61 297 aa14.13□□□□□ -0.15
CPEB1-207ENST00000611031 ERICH6Q7L0X2 663 aa14.11□□□□□ -0.15
CPEB1-207ENST00000611031 DDX10Q13206 875 aaKnown RBP14.11□□□□□ -0.15
CPEB1-207ENST00000611031 SYNJ1O43426 1573 aa14.1□□□□□ -0.15
CPEB1-207ENST00000611031 EEA1Q15075 1411 aa14.09□□□□□ -0.15
CPEB1-207ENST00000611031 VPS8Q8N3P4 1428 aa14.07□□□□□ -0.16
CPEB1-207ENST00000611031 WDR97A6NE52 1622 aa14.05□□□□□ -0.16
CPEB1-207ENST00000611031 TARBP1Q13395 1621 aaKnown RBP14.05□□□□□ -0.16
CPEB1-207ENST00000611031 POLA1P09884 1462 aaPredicted RBP14.04□□□□□ -0.16
CPEB1-207ENST00000611031 FGD5Q6ZNL6 1462 aa14.03□□□□□ -0.16
CPEB1-207ENST00000611031 IRX6P78412 446 aaPredicted RBP14.03□□□□□ -0.16
CPEB1-207ENST00000611031 HIRIP3Q9BW71 556 aaPredicted RBP14.03□□□□□ -0.16
CPEB1-207ENST00000611031 IFT140Q96RY7 1462 aa14.01□□□□□ -0.17
CPEB1-207ENST00000611031 KANK4Q5T7N3 995 aaPredicted RBP13.99□□□□□ -0.17
CPEB1-207ENST00000611031 ABCA10Q8WWZ4 1543 aa13.96□□□□□ -0.17
CPEB1-207ENST00000611031 CDK11AQ9UQ88 783 aaPredicted RBP13.95□□□□□ -0.18
CPEB1-207ENST00000611031 DEKP35659 375 aaKnown RBP13.95□□□□□ -0.18
CPEB1-207ENST00000611031 RAPGEF2Q9Y4G8 1499 aa13.93□□□□□ -0.18
CPEB1-207ENST00000611031 ABCA5Q8WWZ7 1642 aa13.93□□□□□ -0.18
CPEB1-207ENST00000611031 FANCIQ9NVI1 1328 aa13.92□□□□□ -0.18
CPEB1-207ENST00000611031 RAD54L2Q9Y4B4 1467 aa13.92□□□□□ -0.18
CPEB1-207ENST00000611031 SIN3AQ96ST3 1273 aa13.91□□□□□ -0.18
CPEB1-207ENST00000611031 KIF21BO75037 1637 aa13.91□□□□□ -0.18
CPEB1-207ENST00000611031 ANP32CO43423 234 aa13.91□□□□□ -0.18
CPEB1-207ENST00000611031 EIF4G3O43432 1585 aaKnown RBP13.91□□□□□ -0.18
CPEB1-207ENST00000611031 NBR1Q14596 966 aa13.89□□□□□ -0.19
CPEB1-207ENST00000611031 PPP1R15AO75807 674 aaPredicted RBP13.87□□□□□ -0.19
CPEB1-207ENST00000611031 ANO8Q9HCE9 1232 aaPredicted RBP13.87□□□□□ -0.19
CPEB1-207ENST00000611031 ZNF608Q9ULD9 1512 aaPredicted RBP13.87□□□□□ -0.19
CPEB1-207ENST00000611031 PBRM1Q86U86 1689 aa13.87□□□□□ -0.19
CPEB1-207ENST00000611031 HNRNPUQ00839 825 aaKnown RBP eCLIP13.84□□□□□ -0.19
CPEB1-207ENST00000611031 RAB3GAP2Q9H2M9 1393 aa13.83□□□□□ -0.19
CPEB1-207ENST00000611031 CCER2I3L3R5 266 aa13.82□□□□□ -0.2
CPEB1-207ENST00000611031 CCNB3Q8WWL7 1395 aa13.81□□□□□ -0.2
CPEB1-207ENST00000611031 ERICH3Q5RHP9 1530 aa13.81□□□□□ -0.2
CPEB1-207ENST00000611031 GAPVD1Q14C86 1478 aa13.8□□□□□ -0.2
CPEB1-207ENST00000611031 AQRO60306 1485 aaKnown RBP eCLIP13.79□□□□□ -0.21e-6■■■■□ 20
CPEB1-207ENST00000611031 GRIN2BQ13224 1484 aa13.79□□□□□ -0.2
CPEB1-207ENST00000611031 RRBP1Q9P2E9 1410 aaKnown RBP13.78□□□□□ -0.2
CPEB1-207ENST00000611031 MYT1LQ9UL68 1186 aa13.78□□□□□ -0.2
CPEB1-207ENST00000611031 MAPKBP1O60336 1514 aa13.78□□□□□ -0.2
CPEB1-207ENST00000611031 KIF27Q86VH2 1401 aa13.77□□□□□ -0.2
CPEB1-207ENST00000611031 TDRD9Q8NDG6 1382 aaKnown RBP13.77□□□□□ -0.21
CPEB1-207ENST00000611031 B4GALNT3Q6L9W6 998 aa13.77□□□□□ -0.21
CPEB1-207ENST00000611031 MAGI1Q96QZ7 1491 aaPredicted RBP13.76□□□□□ -0.21
CPEB1-207ENST00000611031 CUL7Q14999 1698 aa13.75□□□□□ -0.21
CPEB1-207ENST00000611031 ARAP1Q96P48 1450 aa13.75□□□□□ -0.21
CPEB1-207ENST00000611031 ADAMTS12P58397 1594 aa13.75□□□□□ -0.21
CPEB1-207ENST00000611031 PAK3O75914 559 aaPredicted RBP13.75□□□□□ -0.21
CPEB1-207ENST00000611031 SALL2Q9Y467 1007 aaPredicted RBP13.75□□□□□ -0.21
CPEB1-207ENST00000611031 CCDC136Q96JN2 1154 aa13.73□□□□□ -0.21
CPEB1-207ENST00000611031 NOP58Q9Y2X3 529 aaKnown RBP13.73□□□□□ -0.21
CPEB1-207ENST00000611031 FAM50AQ14320 339 aaKnown RBP13.73□□□□□ -0.21
CPEB1-207ENST00000611031 RTN4Q9NQC3 1192 aaKnown RBP13.72□□□□□ -0.21
CPEB1-207ENST00000611031 SNAPC4Q5SXM2 1469 aa13.72□□□□□ -0.21
CPEB1-207ENST00000611031 PPP4R2Q9NY27 417 aa13.71□□□□□ -0.22
CPEB1-207ENST00000611031 CHD1O14646 1710 aa13.7□□□□□ -0.22
CPEB1-207ENST00000611031 IGF1RP08069 1367 aa13.7□□□□□ -0.22
CPEB1-207ENST00000611031 SYNJ2O15056 1496 aa13.68□□□□□ -0.22
CPEB1-207ENST00000611031 SETD5Q9C0A6 1442 aa13.68□□□□□ -0.22
CPEB1-207ENST00000611031 FHAD1B1AJZ9 1412 aa13.67□□□□□ -0.22
CPEB1-207ENST00000611031 IL27Q8NEV9 243 aa13.66□□□□□ -0.22
CPEB1-207ENST00000611031 RTL5Q5HYW3 569 aaPredicted RBP13.65□□□□□ -0.22
CPEB1-207ENST00000611031 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.64□□□□□ -0.23
CPEB1-207ENST00000611031 PRXQ9BXM0 1461 aa13.64□□□□□ -0.23
CPEB1-207ENST00000611031 FAM9BQ8IZU0 186 aa13.62□□□□□ -0.23
CPEB1-207ENST00000611031 ATP1B4Q9UN42 357 aaPredicted RBP13.62□□□□□ -0.23
CPEB1-207ENST00000611031 GRIN2AQ12879 1464 aa13.62□□□□□ -0.23
CPEB1-207ENST00000611031 CCDC184Q52MB2 194 aa13.61□□□□□ -0.23
CPEB1-207ENST00000611031 TONSLQ96HA7 1378 aa13.6□□□□□ -0.23
CPEB1-207ENST00000611031 CARMIL1Q5VZK9 1371 aa13.59□□□□□ -0.23
CPEB1-207ENST00000611031 NUP160Q12769 1436 aa13.59□□□□□ -0.23
CPEB1-207ENST00000611031 CLASP1Q7Z460 1538 aa13.58□□□□□ -0.24
CPEB1-207ENST00000611031 CEP170Q5SW79 1584 aa13.57□□□□□ -0.24
CPEB1-207ENST00000611031 ANP32AP39687 249 aaKnown RBP13.57□□□□□ -0.24
CPEB1-207ENST00000611031 ERICH6BQ5W0A0 696 aa13.57□□□□□ -0.24
CPEB1-207ENST00000611031 TIMELESSQ9UNS1 1208 aa13.57□□□□□ -0.24
CPEB1-207ENST00000611031 ZBTB47Q9UFB7 747 aaPredicted RBP13.56□□□□□ -0.24
CPEB1-207ENST00000611031 PHLDB1Q86UU1 1377 aa13.56□□□□□ -0.24
CPEB1-207ENST00000611031 SENP3-EIF4A1A0A087X0R7 540 aa13.55□□□□□ -0.24
CPEB1-207ENST00000611031 CNGB1Q14028 1251 aaPredicted RBP13.55□□□□□ -0.24
CPEB1-207ENST00000611031 CTTNBP2Q8WZ74 1663 aa13.54□□□□□ -0.24
CPEB1-207ENST00000611031 ARHGAP35Q9NRY4 1499 aa13.54□□□□□ -0.24
CPEB1-207ENST00000611031 IPO9Q96P70 1041 aaKnown RBP13.54□□□□□ -0.24
CPEB1-207ENST00000611031 NPM2Q86SE8 214 aaKnown RBP13.53□□□□□ -0.24
CPEB1-207ENST00000611031 SHROOM2Q13796 1616 aa13.53□□□□□ -0.24
CPEB1-207ENST00000611031 P3H3Q8IVL6 736 aa13.52□□□□□ -0.25
CPEB1-207ENST00000611031 MRS2Q9HD23 443 aa13.51□□□□□ -0.25
CPEB1-207ENST00000611031 CHMP7Q8WUX9 453 aaPredicted RBP13.5□□□□□ -0.25
CPEB1-207ENST00000611031 LAS1LQ9Y4W2 734 aaKnown RBP13.5□□□□□ -0.25
CPEB1-207ENST00000611031 WASHC2AQ641Q2 1341 aa13.5□□□□□ -0.25
CPEB1-207ENST00000611031 HSPA5P11021 654 aaKnown RBP13.48□□□□□ -0.25
CPEB1-207ENST00000611031 KIAA0586Q9BVV6 1533 aa13.48□□□□□ -0.25
CPEB1-207ENST00000611031 OSCARQ8IYS5 282 aa13.46□□□□□ -0.25
CPEB1-207ENST00000611031 IQGAP2Q13576 1575 aa13.45□□□□□ -0.26
CPEB1-207ENST00000611031 NEFMP07197 916 aa13.45□□□□□ -0.26
CPEB1-207ENST00000611031 AKNAQ7Z591 1439 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms