RNA–Protein interactions for RNA: ENST00000608425.5

CTCFL-217, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-217ENST00000608425 KIF27Q86VH2 1401 aa16.98■□□□□ 0.31
CTCFL-217ENST00000608425 EIF5BO60841 1220 aaKnown RBP16.97■□□□□ 0.31
CTCFL-217ENST00000608425 FANCIQ9NVI1 1328 aa16.97■□□□□ 0.31
CTCFL-217ENST00000608425 CLIP1P30622 1438 aa16.95■□□□□ 0.3
CTCFL-217ENST00000608425 PLEKHG5O94827 1062 aa16.94■□□□□ 0.3
CTCFL-217ENST00000608425 ERICH6BQ5W0A0 696 aa16.94■□□□□ 0.3
CTCFL-217ENST00000608425 MYT1LQ9UL68 1186 aa16.92■□□□□ 0.3
CTCFL-217ENST00000608425 VPS8Q8N3P4 1428 aa16.9■□□□□ 0.3
CTCFL-217ENST00000608425 FANCD2Q9BXW9 1451 aa16.89■□□□□ 0.29
CTCFL-217ENST00000608425 HNRNPUL2Q1KMD3 747 aaKnown RBP16.88■□□□□ 0.29
CTCFL-217ENST00000608425 PKNOX2Q96KN3 472 aa16.88■□□□□ 0.29
CTCFL-217ENST00000608425 LAMC3Q9Y6N6 1575 aa16.87■□□□□ 0.29
CTCFL-217ENST00000608425 FGD5Q6ZNL6 1462 aa16.86■□□□□ 0.29
CTCFL-217ENST00000608425 DNMBPQ6XZF7 1577 aa16.86■□□□□ 0.29
CTCFL-217ENST00000608425 NEFLP07196 543 aa16.85■□□□□ 0.29
CTCFL-217ENST00000608425 CUX2O14529 1486 aa16.82■□□□□ 0.28
CTCFL-217ENST00000608425 PAK3O75914 559 aaPredicted RBP16.8■□□□□ 0.28
CTCFL-217ENST00000608425 TOPBP1Q92547 1522 aa16.77■□□□□ 0.28
CTCFL-217ENST00000608425 NESP48681 1621 aa16.76■□□□□ 0.27
CTCFL-217ENST00000608425 ARAP1Q96P48 1450 aa16.76■□□□□ 0.27
CTCFL-217ENST00000608425 IRX6P78412 446 aaPredicted RBP16.76■□□□□ 0.27
CTCFL-217ENST00000608425 IGF1RP08069 1367 aa16.75■□□□□ 0.27
CTCFL-217ENST00000608425 ABCA10Q8WWZ4 1543 aa16.75■□□□□ 0.27
CTCFL-217ENST00000608425 CDK11AQ9UQ88 783 aaPredicted RBP16.75■□□□□ 0.27
CTCFL-217ENST00000608425 TRIM52Q96A61 297 aa16.74■□□□□ 0.27
CTCFL-217ENST00000608425 POLA1P09884 1462 aaPredicted RBP16.73■□□□□ 0.27
CTCFL-217ENST00000608425 WDR97A6NE52 1622 aa16.71■□□□□ 0.27
CTCFL-217ENST00000608425 SLC24A1O60721 1099 aa16.69■□□□□ 0.26
CTCFL-217ENST00000608425 CUL7Q14999 1698 aa16.68■□□□□ 0.26
CTCFL-217ENST00000608425 NOP58Q9Y2X3 529 aaKnown RBP16.68■□□□□ 0.26
CTCFL-217ENST00000608425 CARMIL1Q5VZK9 1371 aa16.68■□□□□ 0.26
CTCFL-217ENST00000608425 PDS5BQ9NTI5 1447 aa16.67■□□□□ 0.26
CTCFL-217ENST00000608425 ARHGAP35Q9NRY4 1499 aa16.67■□□□□ 0.26
CTCFL-217ENST00000608425 URB2Q14146 1524 aaKnown RBP16.66■□□□□ 0.26
CTCFL-217ENST00000608425 TIMELESSQ9UNS1 1208 aa16.65■□□□□ 0.26
CTCFL-217ENST00000608425 KIF21AQ7Z4S6 1674 aa16.64■□□□□ 0.25
CTCFL-217ENST00000608425 RAD54L2Q9Y4B4 1467 aa16.64■□□□□ 0.25
CTCFL-217ENST00000608425 PODXL2Q9NZ53 605 aa16.63■□□□□ 0.25
CTCFL-217ENST00000608425 ABCA5Q8WWZ7 1642 aa16.61■□□□□ 0.25
CTCFL-217ENST00000608425 RTL5Q5HYW3 569 aaPredicted RBP16.59■□□□□ 0.25
CTCFL-217ENST00000608425 RANGAP1P46060 587 aaPredicted RBP16.58■□□□□ 0.24
CTCFL-217ENST00000608425 CTTNBP2Q8WZ74 1663 aa16.58■□□□□ 0.24
CTCFL-217ENST00000608425 MAP3K1Q13233 1512 aa16.56■□□□□ 0.24
CTCFL-217ENST00000608425 EFCAB5A4FU69 1503 aa16.54■□□□□ 0.24
CTCFL-217ENST00000608425 BRPF3Q9ULD4 1205 aa16.53■□□□□ 0.24
CTCFL-217ENST00000608425 TARBP1Q13395 1621 aaKnown RBP16.52■□□□□ 0.23
CTCFL-217ENST00000608425 DDX10Q13206 875 aaKnown RBP16.51■□□□□ 0.23
CTCFL-217ENST00000608425 DNAJC5BQ9UF47 199 aa16.5■□□□□ 0.23
CTCFL-217ENST00000608425 FHAD1B1AJZ9 1412 aa16.5■□□□□ 0.23
CTCFL-217ENST00000608425 TIAM1Q13009 1591 aa16.49■□□□□ 0.23
CTCFL-217ENST00000608425 GAPVD1Q14C86 1478 aa16.49■□□□□ 0.23
CTCFL-217ENST00000608425 RRBP1Q9P2E9 1410 aaKnown RBP16.48■□□□□ 0.23
CTCFL-217ENST00000608425 CFAP43Q8NDM7 1665 aa16.48■□□□□ 0.23
CTCFL-217ENST00000608425 ZMYND15Q9H091 742 aa16.47■□□□□ 0.23
CTCFL-217ENST00000608425 MRC2Q9UBG0 1479 aa16.45■□□□□ 0.22
CTCFL-217ENST00000608425 B4GALNT3Q6L9W6 998 aa16.44■□□□□ 0.22
CTCFL-217ENST00000608425 KANK4Q5T7N3 995 aaPredicted RBP16.44■□□□□ 0.22
CTCFL-217ENST00000608425 PCF11O94913 1555 aaKnown RBP16.44■□□□□ 0.22
CTCFL-217ENST00000608425 PBRM1Q86U86 1689 aa16.43■□□□□ 0.22
CTCFL-217ENST00000608425 VSIG10Q8N0Z9 540 aa16.43■□□□□ 0.22
CTCFL-217ENST00000608425 AQRO60306 1485 aaKnown RBP eCLIP16.43■□□□□ 0.223e-6■■■□□ 17.6
CTCFL-217ENST00000608425 FYCO1Q9BQS8 1478 aa16.42■□□□□ 0.22
CTCFL-217ENST00000608425 SAMD9Q5K651 1589 aa16.41■□□□□ 0.22
CTCFL-217ENST00000608425 TDRD9Q8NDG6 1382 aaKnown RBP16.41■□□□□ 0.22
CTCFL-217ENST00000608425 DAXXQ9UER7 740 aaPredicted RBP16.39■□□□□ 0.21
CTCFL-217ENST00000608425 WASHC2AQ641Q2 1341 aa16.39■□□□□ 0.21
CTCFL-217ENST00000608425 LRRC9Q6ZRR7 1453 aa16.39■□□□□ 0.21
CTCFL-217ENST00000608425 DHX57Q6P158 1386 aaKnown RBP16.39■□□□□ 0.21
CTCFL-217ENST00000608425 WDR62O43379 1518 aa16.39■□□□□ 0.21
CTCFL-217ENST00000608425 LAS1LQ9Y4W2 734 aaKnown RBP16.37■□□□□ 0.21
CTCFL-217ENST00000608425 ZBTB47Q9UFB7 747 aaPredicted RBP16.37■□□□□ 0.21
CTCFL-217ENST00000608425 CASKIN1Q8WXD9 1431 aa16.37■□□□□ 0.21
CTCFL-217ENST00000608425 IPO9Q96P70 1041 aaKnown RBP16.36■□□□□ 0.21
CTCFL-217ENST00000608425 FHOD3Q2V2M9 1422 aa16.36■□□□□ 0.21
CTCFL-217ENST00000608425 CCNB3Q8WWL7 1395 aa16.35■□□□□ 0.21
CTCFL-217ENST00000608425 FMN1Q68DA7 1419 aa16.35■□□□□ 0.21
CTCFL-217ENST00000608425 C11orf95C9JLR9 678 aaPredicted RBP16.35■□□□□ 0.21
CTCFL-217ENST00000608425 ADAMTS12P58397 1594 aa16.35■□□□□ 0.21
CTCFL-217ENST00000608425 HIRIP3Q9BW71 556 aaPredicted RBP16.35■□□□□ 0.21
CTCFL-217ENST00000608425 NEFMP07197 916 aa16.33■□□□□ 0.21
CTCFL-217ENST00000608425 PPP4R2Q9NY27 417 aa16.33■□□□□ 0.2
CTCFL-217ENST00000608425 IFT140Q96RY7 1462 aa16.32■□□□□ 0.2
CTCFL-217ENST00000608425 SNAPC4Q5SXM2 1469 aa16.32■□□□□ 0.2
CTCFL-217ENST00000608425 THOC2Q8NI27 1593 aaKnown RBP16.32■□□□□ 0.2
CTCFL-217ENST00000608425 WASHC2CQ9Y4E1 1318 aa16.31■□□□□ 0.2
CTCFL-217ENST00000608425 GRIN2BQ13224 1484 aa16.29■□□□□ 0.2
CTCFL-217ENST00000608425 ANP32AP39687 249 aaKnown RBP16.29■□□□□ 0.2
CTCFL-217ENST00000608425 HNRNPUQ00839 825 aaKnown RBP eCLIP16.29■□□□□ 0.2
CTCFL-217ENST00000608425 A0A0U1RQG5 324 aaPredicted RBP16.27■□□□□ 0.2
CTCFL-217ENST00000608425 IQGAP2Q13576 1575 aa16.26■□□□□ 0.19
CTCFL-217ENST00000608425 PPP1R15AO75807 674 aaPredicted RBP16.25■□□□□ 0.19
CTCFL-217ENST00000608425 RSPH6AQ9H0K4 717 aa16.25■□□□□ 0.19
CTCFL-217ENST00000608425 LRRIQ1Q96JM4 1722 aa16.24■□□□□ 0.19
CTCFL-217ENST00000608425 P3H3Q8IVL6 736 aa16.23■□□□□ 0.19
CTCFL-217ENST00000608425 SIN3AQ96ST3 1273 aa16.23■□□□□ 0.19
CTCFL-217ENST00000608425 PHLDB1Q86UU1 1377 aa16.23■□□□□ 0.19
CTCFL-217ENST00000608425 NPM2Q86SE8 214 aaKnown RBP16.22■□□□□ 0.19
CTCFL-217ENST00000608425 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.21■□□□□ 0.19
CTCFL-217ENST00000608425 ANP32CO43423 234 aa16.21■□□□□ 0.19
CTCFL-217ENST00000608425 GLIPR1L2Q4G1C9 344 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms