RNA–Protein interactions for RNA: ENST00000605569.1

NDE1P2-201, Transcript of nudE neurodevelopment protein 1 pseudogene 2, humanhuman

BASIC

Gene NDE1P2, Length 1,105 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1P2-201ENST00000605569 CFTRP13569 1480 aa16.93■□□□□ 0.3
NDE1P2-201ENST00000605569 STAG3Q9UJ98 1225 aa16.92■□□□□ 0.3
NDE1P2-201ENST00000605569 CCDC88BA6NC98 1476 aa16.9■□□□□ 0.3
NDE1P2-201ENST00000605569 MRC2Q9UBG0 1479 aa16.9■□□□□ 0.3
NDE1P2-201ENST00000605569 FANCD2Q9BXW9 1451 aa16.89■□□□□ 0.29
NDE1P2-201ENST00000605569 VASPP50552 380 aaPredicted RBP16.89■□□□□ 0.29
NDE1P2-201ENST00000605569 CEP164Q9UPV0 1460 aa16.87■□□□□ 0.29
NDE1P2-201ENST00000605569 DNAJC5Q9H3Z4 198 aa16.87■□□□□ 0.29
NDE1P2-201ENST00000605569 WDR62O43379 1518 aa16.85■□□□□ 0.29
NDE1P2-201ENST00000605569 REM2Q8IYK8 340 aaPredicted RBP16.81■□□□□ 0.28
NDE1P2-201ENST00000605569 SPDYE1Q8NFV5 336 aaPredicted RBP16.8■□□□□ 0.28
NDE1P2-201ENST00000605569 URB2Q14146 1524 aaKnown RBP16.77■□□□□ 0.28
NDE1P2-201ENST00000605569 PRDM2Q13029 1718 aa16.74■□□□□ 0.27
NDE1P2-201ENST00000605569 AMER1Q5JTC6 1135 aaPredicted RBP16.72■□□□□ 0.27
NDE1P2-201ENST00000605569 CLEC11AQ9Y240 323 aa16.69■□□□□ 0.26
NDE1P2-201ENST00000605569 IFNLR1Q8IU57 520 aaPredicted RBP16.67■□□□□ 0.26
NDE1P2-201ENST00000605569 MIER1Q8N108 512 aa16.67■□□□□ 0.26
NDE1P2-201ENST00000605569 PLCD3Q8N3E9 789 aa16.67■□□□□ 0.26
NDE1P2-201ENST00000605569 SUPT5HO00267 1087 aaKnown RBP16.66■□□□□ 0.26
NDE1P2-201ENST00000605569 RTN4Q9NQC3 1192 aaKnown RBP16.64■□□□□ 0.25
NDE1P2-201ENST00000605569 TOPBP1Q92547 1522 aa16.61■□□□□ 0.25
NDE1P2-201ENST00000605569 PITPNM1O00562 1244 aa16.59■□□□□ 0.25
NDE1P2-201ENST00000605569 PRR29P0C7W0 189 aa16.59■□□□□ 0.25
NDE1P2-201ENST00000605569 KLHL34Q8N239 644 aa16.59■□□□□ 0.25
NDE1P2-201ENST00000605569 PLEKHG5O94827 1062 aa16.58■□□□□ 0.24
NDE1P2-201ENST00000605569 DNMBPQ6XZF7 1577 aa16.55■□□□□ 0.24
NDE1P2-201ENST00000605569 ZNF608Q9ULD9 1512 aaPredicted RBP16.55■□□□□ 0.24
NDE1P2-201ENST00000605569 IFT140Q96RY7 1462 aa16.52■□□□□ 0.23
NDE1P2-201ENST00000605569 ABCC8Q09428 1581 aa16.51■□□□□ 0.23
NDE1P2-201ENST00000605569 ZBTB47Q9UFB7 747 aaPredicted RBP16.48■□□□□ 0.23
NDE1P2-201ENST00000605569 SPOCK2Q92563 424 aa16.47■□□□□ 0.23
NDE1P2-201ENST00000605569 POLA1P09884 1462 aaPredicted RBP16.46■□□□□ 0.23
NDE1P2-201ENST00000605569 TARBP1Q13395 1621 aaKnown RBP16.45■□□□□ 0.22
NDE1P2-201ENST00000605569 CUX1P39880 1505 aa16.44■□□□□ 0.22
NDE1P2-201ENST00000605569 RAD54L2Q9Y4B4 1467 aa16.43■□□□□ 0.22
NDE1P2-201ENST00000605569 EIF4G3O43432 1585 aaKnown RBP16.42■□□□□ 0.22
NDE1P2-201ENST00000605569 CREBZFQ9NS37 354 aa16.41■□□□□ 0.22
NDE1P2-201ENST00000605569 AQRO60306 1485 aaKnown RBP eCLIP16.41■□□□□ 0.22
NDE1P2-201ENST00000605569 FGD5Q6ZNL6 1462 aa16.39■□□□□ 0.21
NDE1P2-201ENST00000605569 SOGA1O94964 1423 aa16.37■□□□□ 0.21
NDE1P2-201ENST00000605569 TDRD9Q8NDG6 1382 aaKnown RBP16.35■□□□□ 0.21
NDE1P2-201ENST00000605569 CHRDL2Q6WN34 429 aa16.31■□□□□ 0.2
NDE1P2-201ENST00000605569 MNX1P50219 401 aaPredicted RBP16.26■□□□□ 0.19
NDE1P2-201ENST00000605569 TRIM41Q8WV44 630 aa16.26■□□□□ 0.19
NDE1P2-201ENST00000605569 CHD1O14646 1710 aa16.25■□□□□ 0.19
NDE1P2-201ENST00000605569 FXR2P51116 673 aaKnown RBP eCLIP16.25■□□□□ 0.19
NDE1P2-201ENST00000605569 WDR97A6NE52 1622 aa16.25■□□□□ 0.19
NDE1P2-201ENST00000605569 SNAPC4Q5SXM2 1469 aa16.23■□□□□ 0.19
NDE1P2-201ENST00000605569 SYNJ1O43426 1573 aa16.23■□□□□ 0.19
NDE1P2-201ENST00000605569 CHADLQ6NUI6 762 aa16.23■□□□□ 0.19
NDE1P2-201ENST00000605569 WRNQ14191 1432 aaPredicted RBP eCLIP16.22■□□□□ 0.19
NDE1P2-201ENST00000605569 PKD2Q13563 968 aa16.21■□□□□ 0.19
NDE1P2-201ENST00000605569 ABCA10Q8WWZ4 1543 aa16.2■□□□□ 0.18
NDE1P2-201ENST00000605569 NPM1P06748 294 aaKnown RBP eCLIP16.2■□□□□ 0.18
NDE1P2-201ENST00000605569 PRKAR2AP13861 404 aaKnown RBP16.2■□□□□ 0.18
NDE1P2-201ENST00000605569 GRIN2BQ13224 1484 aa16.19■□□□□ 0.18
NDE1P2-201ENST00000605569 TOP2BQ02880 1626 aa16.19■□□□□ 0.18
NDE1P2-201ENST00000605569 BIVM-ERCC5R4GMW8 1640 aa16.19■□□□□ 0.18
NDE1P2-201ENST00000605569 NUBP1P53384 320 aa16.18■□□□□ 0.18
NDE1P2-201ENST00000605569 RIMBP3CA6NJZ7 1639 aa16.18■□□□□ 0.18
NDE1P2-201ENST00000605569 RIMBP3BA6NNM3 1639 aa16.18■□□□□ 0.18
NDE1P2-201ENST00000605569 RIMBP3Q9UFD9 1639 aa16.18■□□□□ 0.18
NDE1P2-201ENST00000605569 GAPVD1Q14C86 1478 aa16.17■□□□□ 0.18
NDE1P2-201ENST00000605569 ABCA5Q8WWZ7 1642 aa16.16■□□□□ 0.18
NDE1P2-201ENST00000605569 CIZ1Q9ULV3 898 aaPredicted RBP16.16■□□□□ 0.18
NDE1P2-201ENST00000605569 MAGI1Q96QZ7 1491 aaPredicted RBP16.16■□□□□ 0.18
NDE1P2-201ENST00000605569 PIP4P2Q8N4L2 257 aa16.15■□□□□ 0.18
NDE1P2-201ENST00000605569 PBRM1Q86U86 1689 aa16.14■□□□□ 0.18
NDE1P2-201ENST00000605569 ARHGEF11O15085 1522 aa16.14■□□□□ 0.18
NDE1P2-201ENST00000605569 FARP1Q9Y4F1 1045 aaPredicted RBP16.14■□□□□ 0.17
NDE1P2-201ENST00000605569 CHMP7Q8WUX9 453 aaPredicted RBP16.12■□□□□ 0.17
NDE1P2-201ENST00000605569 GSE1Q14687 1217 aa16.11■□□□□ 0.17
NDE1P2-201ENST00000605569 SYNJ2O15056 1496 aa16.1■□□□□ 0.17
NDE1P2-201ENST00000605569 ECM2O94769 699 aaPredicted RBP16.08■□□□□ 0.16
NDE1P2-201ENST00000605569 DCAF8Q5TAQ9 597 aa16.08■□□□□ 0.16
NDE1P2-201ENST00000605569 CLASP1Q7Z460 1538 aa16.08■□□□□ 0.16
NDE1P2-201ENST00000605569 FAM212AQ96EL1 285 aa16.06■□□□□ 0.16
NDE1P2-201ENST00000605569 RASEFQ8IZ41 740 aa16.04■□□□□ 0.16
NDE1P2-201ENST00000605569 ARAP1Q96P48 1450 aa16.03■□□□□ 0.16
NDE1P2-201ENST00000605569 ADAMTS12P58397 1594 aa16.02■□□□□ 0.16
NDE1P2-201ENST00000605569 CYB5RLQ6IPT4 315 aa16.02■□□□□ 0.16
NDE1P2-201ENST00000605569 GRIN2AQ12879 1464 aa15.99■□□□□ 0.15
NDE1P2-201ENST00000605569 FHAD1B1AJZ9 1412 aa15.97■□□□□ 0.15
NDE1P2-201ENST00000605569 ERICH3Q5RHP9 1530 aa15.97■□□□□ 0.15
NDE1P2-201ENST00000605569 CEP170Q5SW79 1584 aa15.96■□□□□ 0.14
NDE1P2-201ENST00000605569 NUP160Q12769 1436 aa15.94■□□□□ 0.14
NDE1P2-201ENST00000605569 TSPYL2Q9H2G4 693 aaPredicted RBP15.91■□□□□ 0.14
NDE1P2-201ENST00000605569 ERCC6L2Q5T890 1561 aa15.91■□□□□ 0.14
NDE1P2-201ENST00000605569 RGL2O15211 777 aa15.89■□□□□ 0.13
NDE1P2-201ENST00000605569 IGF1RP08069 1367 aa15.87■□□□□ 0.13
NDE1P2-201ENST00000605569 CHRM1P11229 460 aaPredicted RBP15.87■□□□□ 0.13
NDE1P2-201ENST00000605569 KIF27Q86VH2 1401 aa15.86■□□□□ 0.13
NDE1P2-201ENST00000605569 PAK3O75914 559 aaPredicted RBP15.85■□□□□ 0.13
NDE1P2-201ENST00000605569 SHROOM2Q13796 1616 aa15.83■□□□□ 0.13
NDE1P2-201ENST00000605569 PYGBP11216 843 aa15.8■□□□□ 0.12
NDE1P2-201ENST00000605569 RUSC2Q8N2Y8 1516 aa15.79■□□□□ 0.12
NDE1P2-201ENST00000605569 JPH4Q96JJ6 628 aa15.78■□□□□ 0.12
NDE1P2-201ENST00000605569 CUL7Q14999 1698 aa15.77■□□□□ 0.12
NDE1P2-201ENST00000605569 PRG4Q92954 1404 aaPredicted RBP15.77■□□□□ 0.11
NDE1P2-201ENST00000605569 CARMIL1Q5VZK9 1371 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms