RNA–Protein interactions for RNA: ENST00000598215.1

PCAT19-206, prostate cancer associated transcript 19, humanhuman

TSL 4

Gene PCAT19, Length 596 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT19-206ENST00000598215 FBXO3Q9UK99 471 aa13.05□□□□□ -0.32
PCAT19-206ENST00000598215 CHADLQ6NUI6 762 aa13.04□□□□□ -0.32
PCAT19-206ENST00000598215 PIP4P2Q8N4L2 257 aa13.04□□□□□ -0.32
PCAT19-206ENST00000598215 FXR2P51116 673 aaKnown RBP eCLIP13.02□□□□□ -0.33
PCAT19-206ENST00000598215 LAMC3Q9Y6N6 1575 aa13.01□□□□□ -0.33
PCAT19-206ENST00000598215 VASPP50552 380 aaPredicted RBP13□□□□□ -0.33
PCAT19-206ENST00000598215 CREBZFQ9NS37 354 aa13□□□□□ -0.33
PCAT19-206ENST00000598215 CADPSQ9ULU8 1353 aa12.97□□□□□ -0.33
PCAT19-206ENST00000598215 MIER1Q8N108 512 aa12.96□□□□□ -0.33
PCAT19-206ENST00000598215 PRKAR2AP13861 404 aaKnown RBP12.95□□□□□ -0.34
PCAT19-206ENST00000598215 KIF21AQ7Z4S6 1674 aa12.93□□□□□ -0.34
PCAT19-206ENST00000598215 PLCD3Q8N3E9 789 aa12.92□□□□□ -0.34
PCAT19-206ENST00000598215 PDS5BQ9NTI5 1447 aa12.92□□□□□ -0.34
PCAT19-206ENST00000598215 CCDC88BA6NC98 1476 aa12.91□□□□□ -0.34
PCAT19-206ENST00000598215 THOC2Q8NI27 1593 aaKnown RBP12.9□□□□□ -0.35
PCAT19-206ENST00000598215 IFNLR1Q8IU57 520 aaPredicted RBP12.89□□□□□ -0.35
PCAT19-206ENST00000598215 CFTRP13569 1480 aa12.89□□□□□ -0.35
PCAT19-206ENST00000598215 CUX2O14529 1486 aa12.88□□□□□ -0.35
PCAT19-206ENST00000598215 SUPT5HO00267 1087 aaKnown RBP12.87□□□□□ -0.35
PCAT19-206ENST00000598215 MNX1P50219 401 aaPredicted RBP12.87□□□□□ -0.35
PCAT19-206ENST00000598215 FANCD2Q9BXW9 1451 aa12.85□□□□□ -0.35
PCAT19-206ENST00000598215 CEP164Q9UPV0 1460 aa12.84□□□□□ -0.35
PCAT19-206ENST00000598215 MRC2Q9UBG0 1479 aa12.83□□□□□ -0.36
PCAT19-206ENST00000598215 FARP1Q9Y4F1 1045 aaPredicted RBP12.81□□□□□ -0.36
PCAT19-206ENST00000598215 POTEHQ6S545 545 aa12.8□□□□□ -0.36
PCAT19-206ENST00000598215 WDR62O43379 1518 aa12.78□□□□□ -0.36
PCAT19-206ENST00000598215 KLHL34Q8N239 644 aa12.77□□□□□ -0.37
PCAT19-206ENST00000598215 PRDM2Q13029 1718 aa12.76□□□□□ -0.37
PCAT19-206ENST00000598215 PLEKHG5O94827 1062 aa12.74□□□□□ -0.37
PCAT19-206ENST00000598215 URB2Q14146 1524 aaKnown RBP12.73□□□□□ -0.37
PCAT19-206ENST00000598215 NUBP1P53384 320 aa12.67□□□□□ -0.38
PCAT19-206ENST00000598215 RASEFQ8IZ41 740 aa12.66□□□□□ -0.38
PCAT19-206ENST00000598215 TOPBP1Q92547 1522 aa12.64□□□□□ -0.39
PCAT19-206ENST00000598215 SPOCK2Q92563 424 aa12.64□□□□□ -0.39
PCAT19-206ENST00000598215 NPM1P06748 294 aaKnown RBP eCLIP12.63□□□□□ -0.39
PCAT19-206ENST00000598215 EVX2Q03828 476 aa12.63□□□□□ -0.39
PCAT19-206ENST00000598215 ZBTB47Q9UFB7 747 aaPredicted RBP12.63□□□□□ -0.39
PCAT19-206ENST00000598215 DNMBPQ6XZF7 1577 aa12.61□□□□□ -0.39
PCAT19-206ENST00000598215 HAX1O00165 279 aa12.59□□□□□ -0.39
PCAT19-206ENST00000598215 C19orf67A6NJJ6 358 aa12.58□□□□□ -0.4
PCAT19-206ENST00000598215 TSPYL2Q9H2G4 693 aaPredicted RBP12.58□□□□□ -0.4
PCAT19-206ENST00000598215 ABCC8Q09428 1581 aa12.57□□□□□ -0.4
PCAT19-206ENST00000598215 CD44P16070 742 aaKnown RBP12.57□□□□□ -0.4
PCAT19-206ENST00000598215 IFT140Q96RY7 1462 aa12.54□□□□□ -0.4
PCAT19-206ENST00000598215 CUX1P39880 1505 aa12.54□□□□□ -0.4
PCAT19-206ENST00000598215 ZNF608Q9ULD9 1512 aaPredicted RBP12.54□□□□□ -0.4
PCAT19-206ENST00000598215 POLA1P09884 1462 aaPredicted RBP12.53□□□□□ -0.4
PCAT19-206ENST00000598215 DNAJC5Q9H3Z4 198 aa12.52□□□□□ -0.41
PCAT19-206ENST00000598215 DCAF8Q5TAQ9 597 aa12.51□□□□□ -0.41
PCAT19-206ENST00000598215 FGD5Q6ZNL6 1462 aa12.51□□□□□ -0.41
PCAT19-206ENST00000598215 ZRANB1Q9UGI0 708 aa12.5□□□□□ -0.41
PCAT19-206ENST00000598215 CIZ1Q9ULV3 898 aaPredicted RBP12.5□□□□□ -0.41
PCAT19-206ENST00000598215 RAD54L2Q9Y4B4 1467 aa12.5□□□□□ -0.41
PCAT19-206ENST00000598215 TARBP1Q13395 1621 aaKnown RBP12.5□□□□□ -0.41
PCAT19-206ENST00000598215 EIF4G3O43432 1585 aaKnown RBP12.48□□□□□ -0.41
PCAT19-206ENST00000598215 FAM212AQ96EL1 285 aa12.47□□□□□ -0.41
PCAT19-206ENST00000598215 SOGA1O94964 1423 aa12.46□□□□□ -0.41
PCAT19-206ENST00000598215 PHF12Q96QT6 1004 aa12.46□□□□□ -0.41
PCAT19-206ENST00000598215 RTN4Q9NQC3 1192 aaKnown RBP12.46□□□□□ -0.41
PCAT19-206ENST00000598215 AQRO60306 1485 aaKnown RBP eCLIP12.46□□□□□ -0.42
PCAT19-206ENST00000598215 PKD2Q13563 968 aa12.45□□□□□ -0.42
PCAT19-206ENST00000598215 CCDC61Q9Y6R9 512 aa12.45□□□□□ -0.42
PCAT19-206ENST00000598215 WRNQ14191 1432 aaPredicted RBP eCLIP12.44□□□□□ -0.429e-7■■■■■ 55.5
PCAT19-206ENST00000598215 TDRD9Q8NDG6 1382 aaKnown RBP12.43□□□□□ -0.42
PCAT19-206ENST00000598215 SYNJ1O43426 1573 aa12.43□□□□□ -0.42
PCAT19-206ENST00000598215 PAK3O75914 559 aaPredicted RBP12.41□□□□□ -0.42
PCAT19-206ENST00000598215 PYGBP11216 843 aa12.41□□□□□ -0.42
PCAT19-206ENST00000598215 TOP2BQ02880 1626 aa12.4□□□□□ -0.42
PCAT19-206ENST00000598215 GSE1Q14687 1217 aa12.39□□□□□ -0.43
PCAT19-206ENST00000598215 WDR97A6NE52 1622 aa12.39□□□□□ -0.43
PCAT19-206ENST00000598215 BIVM-ERCC5R4GMW8 1640 aa12.39□□□□□ -0.43
PCAT19-206ENST00000598215 ZNF579Q8NAF0 562 aaKnown RBP12.36□□□□□ -0.43
PCAT19-206ENST00000598215 ABCA10Q8WWZ4 1543 aa12.35□□□□□ -0.43
PCAT19-206ENST00000598215 SNAPC4Q5SXM2 1469 aa12.34□□□□□ -0.43
PCAT19-206ENST00000598215 KIF12Q96FN5 646 aa12.33□□□□□ -0.44
PCAT19-206ENST00000598215 GRIN2BQ13224 1484 aa12.33□□□□□ -0.44
PCAT19-206ENST00000598215 GAPVD1Q14C86 1478 aa12.33□□□□□ -0.44
PCAT19-206ENST00000598215 MAP3K13O43283 966 aa12.32□□□□□ -0.44
PCAT19-206ENST00000598215 ECM2O94769 699 aaPredicted RBP12.32□□□□□ -0.44
PCAT19-206ENST00000598215 ABCA5Q8WWZ7 1642 aa12.32□□□□□ -0.44
PCAT19-206ENST00000598215 CHD1O14646 1710 aa12.31□□□□□ -0.44
PCAT19-206ENST00000598215 AMER1Q5JTC6 1135 aaPredicted RBP12.31□□□□□ -0.44
PCAT19-206ENST00000598215 PBRM1Q86U86 1689 aa12.31□□□□□ -0.44
PCAT19-206ENST00000598215 RNF25Q96BH1 459 aaPredicted RBP12.29□□□□□ -0.44
PCAT19-206ENST00000598215 MAGI1Q96QZ7 1491 aaPredicted RBP12.28□□□□□ -0.44
PCAT19-206ENST00000598215 GALR2O43603 387 aaPredicted RBP12.28□□□□□ -0.44
PCAT19-206ENST00000598215 MS4A3Q96HJ5 214 aa12.28□□□□□ -0.44
PCAT19-206ENST00000598215 RGL2O15211 777 aa12.27□□□□□ -0.45
PCAT19-206ENST00000598215 GABBR2O75899 941 aa12.27□□□□□ -0.45
PCAT19-206ENST00000598215 SP7Q8TDD2 431 aaPredicted RBP12.27□□□□□ -0.45
PCAT19-206ENST00000598215 PCDHB8Q9UN66 801 aa12.27□□□□□ -0.45
PCAT19-206ENST00000598215 TRPC6Q9Y210 931 aa12.27□□□□□ -0.45
PCAT19-206ENST00000598215 PCDHB13Q9Y5F0 798 aa12.27□□□□□ -0.45
PCAT19-206ENST00000598215 IFNL1Q8IU54 200 aa12.25□□□□□ -0.45
PCAT19-206ENST00000598215 CHMP7Q8WUX9 453 aaPredicted RBP12.25□□□□□ -0.45
PCAT19-206ENST00000598215 SYNJ2O15056 1496 aa12.25□□□□□ -0.45
PCAT19-206ENST00000598215 CHRM1P11229 460 aaPredicted RBP12.24□□□□□ -0.45
PCAT19-206ENST00000598215 ADAMTS12P58397 1594 aa12.22□□□□□ -0.45
PCAT19-206ENST00000598215 TRIM41Q8WV44 630 aa12.2□□□□□ -0.46
PCAT19-206ENST00000598215 ARHGEF11O15085 1522 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms