RNA–Protein interactions for RNA: ENST00000598215.1

PCAT19-206, prostate cancer associated transcript 19, humanhuman

TSL 4

Gene PCAT19, Length 596 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT19-206ENST00000598215 AEBP2Q6ZN18 517 aaPredicted RBP24.47■■□□□ 1.51
PCAT19-206ENST00000598215 CHIC1Q5VXU3 224 aa23.73■■□□□ 1.39
PCAT19-206ENST00000598215 PHF23Q9BUL5 403 aaPredicted RBP20.99■□□□□ 0.95
PCAT19-206ENST00000598215 SENP3Q9H4L4 574 aaPredicted RBP20.56■□□□□ 0.88
PCAT19-206ENST00000598215 FOXD1Q16676 465 aa19.23■□□□□ 0.67
PCAT19-206ENST00000598215 PLPPR3Q6T4P5 718 aa19.19■□□□□ 0.66
PCAT19-206ENST00000598215 PPP6R1Q9UPN7 881 aa18.57■□□□□ 0.56
PCAT19-206ENST00000598215 ADRA2BP18089 450 aa18.53■□□□□ 0.56
PCAT19-206ENST00000598215 PIAS4Q8N2W9 510 aaPredicted RBP18.08■□□□□ 0.48
PCAT19-206ENST00000598215 MSH5O43196 834 aa17.57■□□□□ 0.4
PCAT19-206ENST00000598215 NISCHQ9Y2I1 1504 aa17.31■□□□□ 0.36
PCAT19-206ENST00000598215 PPP4R3CPQ6ZMV5 832 aa16.99■□□□□ 0.31
PCAT19-206ENST00000598215 MAPK8IP2Q13387 824 aaPredicted RBP16.86■□□□□ 0.29
PCAT19-206ENST00000598215 SCAF1Q9H7N4 1312 aaKnown RBP16.69■□□□□ 0.26
PCAT19-206ENST00000598215 KCNA4P22459 653 aa16.64■□□□□ 0.25
PCAT19-206ENST00000598215 DMRT2Q9Y5R5 561 aa16.45■□□□□ 0.22
PCAT19-206ENST00000598215 CNKSR2Q8WXI2 1034 aa16.44■□□□□ 0.22
PCAT19-206ENST00000598215 NCBP3Q53F19 620 aaKnown RBP16.39■□□□□ 0.21
PCAT19-206ENST00000598215 NPM3O75607 178 aaKnown RBP16.32■□□□□ 0.2
PCAT19-206ENST00000598215 POTEDQ86YR6 584 aa16.21■□□□□ 0.19
PCAT19-206ENST00000598215 RNF216Q9NWF9 866 aaPredicted RBP16.12■□□□□ 0.17
PCAT19-206ENST00000598215 HOXD11P31277 338 aaPredicted RBP16.09■□□□□ 0.17
PCAT19-206ENST00000598215 DCAF8L1A6NGE4 600 aa15.81■□□□□ 0.12
PCAT19-206ENST00000598215 SLC4A1APQ9BWU0 796 aaKnown RBP15.76■□□□□ 0.11
PCAT19-206ENST00000598215 DNAJC5BQ9UF47 199 aa15.66■□□□□ 0.1
PCAT19-206ENST00000598215 SLC4A2P04920 1241 aa15.46■□□□□ 0.07
PCAT19-206ENST00000598215 EHMT2Q96KQ7 1210 aa15.39■□□□□ 0.05
PCAT19-206ENST00000598215 ZBTB22O15209 634 aa15.38■□□□□ 0.05
PCAT19-206ENST00000598215 CCDC180Q9P1Z9 1646 aa15.37■□□□□ 0.05
PCAT19-206ENST00000598215 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.35■□□□□ 0.05
PCAT19-206ENST00000598215 FOXD4L1Q9NU39 408 aa15.2■□□□□ 0.02
PCAT19-206ENST00000598215 CSRNP3Q8WYN3 585 aa15.19■□□□□ 0.02
PCAT19-206ENST00000598215 ABCC9O60706 1549 aa15.17■□□□□ 0.02
PCAT19-206ENST00000598215 U3KPZ7 1027 aaPredicted RBP15.16■□□□□ 0.02
PCAT19-206ENST00000598215 RNF39Q9H2S5 420 aa15.15■□□□□ 0.02
PCAT19-206ENST00000598215 MYCNP04198 464 aaPredicted RBP14.98□□□□□ -0.01
PCAT19-206ENST00000598215 C1QBPQ07021 282 aaKnown RBP14.87□□□□□ -0.03
PCAT19-206ENST00000598215 SPINK5Q9NQ38 1064 aaPredicted RBP14.81□□□□□ -0.04
PCAT19-206ENST00000598215 ATF5Q9Y2D1 282 aaPredicted RBP14.79□□□□□ -0.04
PCAT19-206ENST00000598215 CACNB1Q02641 598 aaPredicted RBP14.78□□□□□ -0.04
PCAT19-206ENST00000598215 SAMD1Q6SPF0 538 aaPredicted RBP14.75□□□□□ -0.05
PCAT19-206ENST00000598215 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.74□□□□□ -0.05
PCAT19-206ENST00000598215 HNRNPUL2Q1KMD3 747 aaKnown RBP14.74□□□□□ -0.05
PCAT19-206ENST00000598215 CAPN15O75808 1086 aa14.66□□□□□ -0.06
PCAT19-206ENST00000598215 TRHP20396 242 aaPredicted RBP14.61□□□□□ -0.07
PCAT19-206ENST00000598215 ATXN8OSP0DMR3 200 aa14.58□□□□□ -0.08
PCAT19-206ENST00000598215 DCAF8L2P0C7V8 631 aa14.54□□□□□ -0.08
PCAT19-206ENST00000598215 APLP2Q06481 763 aa14.54□□□□□ -0.08
PCAT19-206ENST00000598215 RB1CC1Q8TDY2 1594 aa14.51□□□□□ -0.09
PCAT19-206ENST00000598215 ABCB7O75027 752 aa14.47□□□□□ -0.09
PCAT19-206ENST00000598215 ZNF219Q9P2Y4 722 aaPredicted RBP14.47□□□□□ -0.09
PCAT19-206ENST00000598215 NACADO15069 1562 aa14.47□□□□□ -0.09
PCAT19-206ENST00000598215 DSG3P32926 999 aa14.43□□□□□ -0.1
PCAT19-206ENST00000598215 ZCCHC6Q5VYS8 1495 aaKnown RBP14.42□□□□□ -0.1
PCAT19-206ENST00000598215 POLA2Q14181 598 aa14.35□□□□□ -0.11
PCAT19-206ENST00000598215 MYO15BQ96JP2 1530 aa14.32□□□□□ -0.12
PCAT19-206ENST00000598215 DCAF1Q9Y4B6 1507 aa14.26□□□□□ -0.13
PCAT19-206ENST00000598215 UNC13AQ9UPW8 1703 aa14.18□□□□□ -0.14
PCAT19-206ENST00000598215 PABPN1Q86U42 306 aaKnown RBP eCLIP14.17□□□□□ -0.14
PCAT19-206ENST00000598215 SCRIBQ14160 1630 aa14.11□□□□□ -0.15
PCAT19-206ENST00000598215 MKRN4PQ13434 485 aaPredicted RBP14.1□□□□□ -0.15
PCAT19-206ENST00000598215 BICRAQ9NZM4 1560 aa14.09□□□□□ -0.15
PCAT19-206ENST00000598215 FBLN2P98095 1184 aa13.93□□□□□ -0.18
PCAT19-206ENST00000598215 ZBTB12Q9Y330 459 aaPredicted RBP13.93□□□□□ -0.18
PCAT19-206ENST00000598215 OSCARQ8IYS5 282 aa13.91□□□□□ -0.18
PCAT19-206ENST00000598215 SHROOM4Q9ULL8 1493 aa13.87□□□□□ -0.19
PCAT19-206ENST00000598215 EIF4G1Q04637 1599 aaKnown RBP13.72□□□□□ -0.21
PCAT19-206ENST00000598215 FKBP8Q14318 412 aa13.71□□□□□ -0.21
PCAT19-206ENST00000598215 CC2D2AQ9P2K1 1620 aa13.68□□□□□ -0.22
PCAT19-206ENST00000598215 SPDYE4A6NLX3 237 aa13.67□□□□□ -0.22
PCAT19-206ENST00000598215 SPDYE2BA6NHP3 402 aa13.63□□□□□ -0.23
PCAT19-206ENST00000598215 SPDYE6P0CI01 402 aa13.63□□□□□ -0.23
PCAT19-206ENST00000598215 SPDYE2Q495Y8 402 aa13.63□□□□□ -0.23
PCAT19-206ENST00000598215 ZNF692Q9BU19 519 aaPredicted RBP13.63□□□□□ -0.23
PCAT19-206ENST00000598215 CECR2Q9BXF3 1484 aa13.61□□□□□ -0.23
PCAT19-206ENST00000598215 RBM42Q9BTD8 480 aaKnown RBP13.59□□□□□ -0.23
PCAT19-206ENST00000598215 SSUH2Q9Y2M2 353 aa13.58□□□□□ -0.24
PCAT19-206ENST00000598215 AKT1S1Q96B36 256 aa13.48□□□□□ -0.25
PCAT19-206ENST00000598215 SMARCA4P51532 1647 aa13.45□□□□□ -0.26
PCAT19-206ENST00000598215 REM2Q8IYK8 340 aaPredicted RBP13.44□□□□□ -0.26
PCAT19-206ENST00000598215 PROM2Q8N271 834 aa13.43□□□□□ -0.26
PCAT19-206ENST00000598215 BAZ1AQ9NRL2 1556 aaPredicted RBP13.41□□□□□ -0.26
PCAT19-206ENST00000598215 ATAD2BQ9ULI0 1458 aa13.37□□□□□ -0.27
PCAT19-206ENST00000598215 MROH2BQ7Z745 1585 aa13.37□□□□□ -0.27
PCAT19-206ENST00000598215 NCAPD3P42695 1498 aa13.35□□□□□ -0.27
PCAT19-206ENST00000598215 SMARCA2P51531 1590 aa13.34□□□□□ -0.27
PCAT19-206ENST00000598215 PITPNM1O00562 1244 aa13.32□□□□□ -0.28
PCAT19-206ENST00000598215 HMGXB3Q12766 1538 aa13.29□□□□□ -0.28
PCAT19-206ENST00000598215 BAZ1BQ9UIG0 1483 aaKnown RBP13.29□□□□□ -0.28
PCAT19-206ENST00000598215 CLEC11AQ9Y240 323 aa13.28□□□□□ -0.28
PCAT19-206ENST00000598215 PEG3Q9GZU2 1588 aa13.28□□□□□ -0.28
PCAT19-206ENST00000598215 SPDYE1Q8NFV5 336 aaPredicted RBP13.23□□□□□ -0.29
PCAT19-206ENST00000598215 WIZO95785 1651 aa13.22□□□□□ -0.29
PCAT19-206ENST00000598215 RSF1Q96T23 1441 aaPredicted RBP13.19□□□□□ -0.3
PCAT19-206ENST00000598215 CHRDL2Q6WN34 429 aa13.17□□□□□ -0.3
PCAT19-206ENST00000598215 NESP48681 1621 aa13.11□□□□□ -0.31
PCAT19-206ENST00000598215 STAG3Q9UJ98 1225 aa13.1□□□□□ -0.31
PCAT19-206ENST00000598215 PRR29P0C7W0 189 aa13.09□□□□□ -0.31
PCAT19-206ENST00000598215 ERCC6Q03468 1493 aa13.06□□□□□ -0.32
PCAT19-206ENST00000598215 TOP2AP11388 1531 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms