RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 IGF1RP08069 1367 aa24.73■■□□□ 1.55
ARHGEF1-213ENST00000595897 TIAM1Q13009 1591 aa24.72■■□□□ 1.55
ARHGEF1-213ENST00000595897 FKBP8Q14318 412 aa24.71■■□□□ 1.55
ARHGEF1-213ENST00000595897 PHLDB1Q86UU1 1377 aa24.69■■□□□ 1.54
ARHGEF1-213ENST00000595897 LRRC9Q6ZRR7 1453 aa24.68■■□□□ 1.54
ARHGEF1-213ENST00000595897 CARMIL1Q5VZK9 1371 aa24.68■■□□□ 1.54
ARHGEF1-213ENST00000595897 P3H3Q8IVL6 736 aa24.66■■□□□ 1.54
ARHGEF1-213ENST00000595897 MAP3K1Q13233 1512 aa24.66■■□□□ 1.54
ARHGEF1-213ENST00000595897 WDR97A6NE52 1622 aa24.66■■□□□ 1.54
ARHGEF1-213ENST00000595897 HIRIP3Q9BW71 556 aaPredicted RBP24.65■■□□□ 1.54
ARHGEF1-213ENST00000595897 NEFLP07196 543 aa24.63■■□□□ 1.53
ARHGEF1-213ENST00000595897 ANP32EQ9BTT0 268 aa24.63■■□□□ 1.53
ARHGEF1-213ENST00000595897 FHAD1B1AJZ9 1412 aa24.61■■□□□ 1.53
ARHGEF1-213ENST00000595897 TIMELESSQ9UNS1 1208 aa24.6■■□□□ 1.53
ARHGEF1-213ENST00000595897 PPP1R15AO75807 674 aaPredicted RBP24.6■■□□□ 1.53
ARHGEF1-213ENST00000595897 ANP32CO43423 234 aa24.59■■□□□ 1.53
ARHGEF1-213ENST00000595897 TRIM52Q96A61 297 aa24.57■■□□□ 1.52
ARHGEF1-213ENST00000595897 CCER2I3L3R5 266 aa24.51■■□□□ 1.51
ARHGEF1-213ENST00000595897 FGD5Q6ZNL6 1462 aa24.5■■□□□ 1.51
ARHGEF1-213ENST00000595897 CADPSQ9ULU8 1353 aa24.46■■□□□ 1.51
ARHGEF1-213ENST00000595897 TONSLQ96HA7 1378 aa24.46■■□□□ 1.51
ARHGEF1-213ENST00000595897 PCF11O94913 1555 aaKnown RBP24.45■■□□□ 1.5
ARHGEF1-213ENST00000595897 FHOD3Q2V2M9 1422 aa24.45■■□□□ 1.5
ARHGEF1-213ENST00000595897 CFAP43Q8NDM7 1665 aa24.4■■□□□ 1.5
ARHGEF1-213ENST00000595897 RBM19Q9Y4C8 960 aaKnown RBP24.38■■□□□ 1.49
ARHGEF1-213ENST00000595897 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.35■■□□□ 1.494e-7■□□□□ 8.1
ARHGEF1-213ENST00000595897 FYCO1Q9BQS8 1478 aa24.35■■□□□ 1.49
ARHGEF1-213ENST00000595897 PRDM2Q13029 1718 aa24.34■■□□□ 1.49
ARHGEF1-213ENST00000595897 CASKIN1Q8WXD9 1431 aa24.33■■□□□ 1.48
ARHGEF1-213ENST00000595897 FGD6Q6ZV73 1430 aa24.3■■□□□ 1.48
ARHGEF1-213ENST00000595897 MTUS2Q5JR59 1369 aa24.29■■□□□ 1.48
ARHGEF1-213ENST00000595897 CCDC18Q5T9S5 1454 aa24.29■■□□□ 1.48
ARHGEF1-213ENST00000595897 HNRNPUQ00839 825 aaKnown RBP eCLIP24.26■■□□□ 1.47
ARHGEF1-213ENST00000595897 EFCAB5A4FU69 1503 aa24.25■■□□□ 1.47
ARHGEF1-213ENST00000595897 UACAQ9BZF9 1416 aa24.25■■□□□ 1.47
ARHGEF1-213ENST00000595897 RAD54L2Q9Y4B4 1467 aa24.24■■□□□ 1.47
ARHGEF1-213ENST00000595897 AQRO60306 1485 aaKnown RBP eCLIP24.24■■□□□ 1.479e-8■■■■■ 41.4
ARHGEF1-213ENST00000595897 FMN1Q68DA7 1419 aa24.24■■□□□ 1.47
ARHGEF1-213ENST00000595897 FANCD2Q9BXW9 1451 aa24.22■■□□□ 1.47
ARHGEF1-213ENST00000595897 HFM1A2PYH4 1435 aa24.22■■□□□ 1.47
ARHGEF1-213ENST00000595897 PTPRKQ15262 1439 aa24.19■■□□□ 1.46
ARHGEF1-213ENST00000595897 IRX6P78412 446 aaPredicted RBP24.17■■□□□ 1.46
ARHGEF1-213ENST00000595897 ABCA10Q8WWZ4 1543 aa24.15■■□□□ 1.46
ARHGEF1-213ENST00000595897 NAIPQ13075 1403 aa24.13■■□□□ 1.45
ARHGEF1-213ENST00000595897 POLA1P09884 1462 aaPredicted RBP24.12■■□□□ 1.45
ARHGEF1-213ENST00000595897 PTPN23Q9H3S7 1636 aa24.12■■□□□ 1.45
ARHGEF1-213ENST00000595897 CDK11AQ9UQ88 783 aaPredicted RBP24.12■■□□□ 1.45
ARHGEF1-213ENST00000595897 RRP7BPQ9NSQ0 103 aa24.1■■□□□ 1.45
ARHGEF1-213ENST00000595897 SNAPC4Q5SXM2 1469 aa24.1■■□□□ 1.45
ARHGEF1-213ENST00000595897 MYOM3Q5VTT5 1437 aa24.1■■□□□ 1.45
ARHGEF1-213ENST00000595897 HSPA5P11021 654 aaKnown RBP24.09■■□□□ 1.45
ARHGEF1-213ENST00000595897 DNMBPQ6XZF7 1577 aa24.09■■□□□ 1.45
ARHGEF1-213ENST00000595897 NCOA2Q15596 1464 aa24.09■■□□□ 1.45
ARHGEF1-213ENST00000595897 CHIC2Q9UKJ5 165 aa24.09■■□□□ 1.45
ARHGEF1-213ENST00000595897 BCL11AQ9H165 835 aa24.07■■□□□ 1.44
ARHGEF1-213ENST00000595897 WASHC2AQ641Q2 1341 aa24.07■■□□□ 1.44
ARHGEF1-213ENST00000595897 TOPBP1Q92547 1522 aa24.07■■□□□ 1.44
ARHGEF1-213ENST00000595897 CC2D2AQ9P2K1 1620 aa24.06■■□□□ 1.44
ARHGEF1-213ENST00000595897 CUL7Q14999 1698 aa24.05■■□□□ 1.44
ARHGEF1-213ENST00000595897 EIF4G2P78344 907 aaKnown RBP eCLIP24.04■■□□□ 1.444e-7■■■■□ 23.6
ARHGEF1-213ENST00000595897 CTTNBP2Q8WZ74 1663 aa24.03■■□□□ 1.44
ARHGEF1-213ENST00000595897 MSH5O43196 834 aa24.02■■□□□ 1.44
ARHGEF1-213ENST00000595897 ERICH6Q7L0X2 663 aa24■■□□□ 1.43
ARHGEF1-213ENST00000595897 KDM5BQ9UGL1 1544 aa23.98■■□□□ 1.43
ARHGEF1-213ENST00000595897 TDRD9Q8NDG6 1382 aaKnown RBP23.98■■□□□ 1.43
ARHGEF1-213ENST00000595897 FANCIQ9NVI1 1328 aa23.96■■□□□ 1.43
ARHGEF1-213ENST00000595897 FAM9BQ8IZU0 186 aa23.96■■□□□ 1.43
ARHGEF1-213ENST00000595897 GRIN2BQ13224 1484 aa23.94■■□□□ 1.42
ARHGEF1-213ENST00000595897 SUPT6HQ7KZ85 1726 aaKnown RBP23.94■■□□□ 1.42
ARHGEF1-213ENST00000595897 CCDC184Q52MB2 194 aa23.94■■□□□ 1.42
ARHGEF1-213ENST00000595897 EHBP1L1Q8N3D4 1523 aa23.93■■□□□ 1.42
ARHGEF1-213ENST00000595897 NESP48681 1621 aa23.93■■□□□ 1.42
ARHGEF1-213ENST00000595897 ERICH6BQ5W0A0 696 aa23.93■■□□□ 1.42
ARHGEF1-213ENST00000595897 PPP4R2Q9NY27 417 aa23.93■■□□□ 1.42
ARHGEF1-213ENST00000595897 L3MBTL2Q969R5 705 aa23.91■■□□□ 1.42
ARHGEF1-213ENST00000595897 MPHOSPH9Q99550 1183 aa23.91■■□□□ 1.42
ARHGEF1-213ENST00000595897 MRS2Q9HD23 443 aa23.91■■□□□ 1.42
ARHGEF1-213ENST00000595897 CNTLNQ9NXG0 1405 aa23.9■■□□□ 1.42
ARHGEF1-213ENST00000595897 FOXD1Q16676 465 aa23.89■■□□□ 1.42
ARHGEF1-213ENST00000595897 SAMD9Q5K651 1589 aa23.89■■□□□ 1.41
ARHGEF1-213ENST00000595897 PRKRIP1Q9H875 184 aaPredicted RBP23.88■■□□□ 1.41
ARHGEF1-213ENST00000595897 UGGT2Q9NYU1 1516 aa23.87■■□□□ 1.41
ARHGEF1-213ENST00000595897 LRRIQ1Q96JM4 1722 aa23.86■■□□□ 1.41
ARHGEF1-213ENST00000595897 THOC2Q8NI27 1593 aaKnown RBP23.86■■□□□ 1.41
ARHGEF1-213ENST00000595897 C11orf95C9JLR9 678 aaPredicted RBP23.85■■□□□ 1.41
ARHGEF1-213ENST00000595897 GAPVD1Q14C86 1478 aa23.85■■□□□ 1.41
ARHGEF1-213ENST00000595897 ARID3CA6NKF2 412 aa23.84■■□□□ 1.41
ARHGEF1-213ENST00000595897 CCDC7Q96M83 1385 aa23.83■■□□□ 1.41
ARHGEF1-213ENST00000595897 DENND4BO75064 1496 aaPredicted RBP23.83■■□□□ 1.41
ARHGEF1-213ENST00000595897 B4GALNT3Q6L9W6 998 aa23.82■■□□□ 1.4
ARHGEF1-213ENST00000595897 MAGI3Q5TCQ9 1506 aa23.81■■□□□ 1.4
ARHGEF1-213ENST00000595897 URB2Q14146 1524 aaKnown RBP23.8■■□□□ 1.4
ARHGEF1-213ENST00000595897 ZBED9Q6R2W3 1325 aa23.8■■□□□ 1.4
ARHGEF1-213ENST00000595897 TCOF1Q13428 1488 aaKnown RBP23.79■■□□□ 1.4
ARHGEF1-213ENST00000595897 NCOA1Q15788 1441 aa23.79■■□□□ 1.4
ARHGEF1-213ENST00000595897 ARHGEF11O15085 1522 aa23.78■■□□□ 1.4
ARHGEF1-213ENST00000595897 HECW1Q76N89 1606 aa23.78■■□□□ 1.4
ARHGEF1-213ENST00000595897 AKNAQ7Z591 1439 aa23.77■■□□□ 1.4
ARHGEF1-213ENST00000595897 NBPF8Q3BBV2 869 aa23.75■■□□□ 1.39
ARHGEF1-213ENST00000595897 KDM6BO15054 1643 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms