RNA–Protein interactions for RNA: ENST00000592761.2

TIMP2-205, Transcript of TIMP metallopeptidase inhibitor 2, humanhuman

TSL 1 (best)

Gene TIMP2, Length 2,433 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2-205ENST00000592761 CCNB3Q8WWL7 1395 aa19.48■□□□□ 0.71
TIMP2-205ENST00000592761 ARHGAP35Q9NRY4 1499 aa19.46■□□□□ 0.71
TIMP2-205ENST00000592761 URB2Q14146 1524 aaKnown RBP19.44■□□□□ 0.7
TIMP2-205ENST00000592761 KCNH8Q96L42 1107 aa19.44■□□□□ 0.7
TIMP2-205ENST00000592761 KIF27Q86VH2 1401 aa19.43■□□□□ 0.7
TIMP2-205ENST00000592761 TSHZ2Q9NRE2 1034 aa19.42■□□□□ 0.7
TIMP2-205ENST00000592761 MAPKBP1O60336 1514 aa19.42■□□□□ 0.7
TIMP2-205ENST00000592761 ITGAEP38570 1179 aa19.42■□□□□ 0.7
TIMP2-205ENST00000592761 RAB3GAP2Q9H2M9 1393 aa19.39■□□□□ 0.69
TIMP2-205ENST00000592761 IFT140Q96RY7 1462 aa19.37■□□□□ 0.69
TIMP2-205ENST00000592761 DNMBPQ6XZF7 1577 aa19.37■□□□□ 0.69
TIMP2-205ENST00000592761 TOPBP1Q92547 1522 aa19.33■□□□□ 0.69
TIMP2-205ENST00000592761 TIAM1Q13009 1591 aa19.31■□□□□ 0.68
TIMP2-205ENST00000592761 WDR97A6NE52 1622 aa19.29■□□□□ 0.68
TIMP2-205ENST00000592761 SETD5Q9C0A6 1442 aa19.27■□□□□ 0.68
TIMP2-205ENST00000592761 MAP3K1Q13233 1512 aa19.27■□□□□ 0.67
TIMP2-205ENST00000592761 SIN3AQ96ST3 1273 aa19.24■□□□□ 0.67
TIMP2-205ENST00000592761 DDX10Q13206 875 aaKnown RBP19.23■□□□□ 0.67
TIMP2-205ENST00000592761 LRRC9Q6ZRR7 1453 aa19.23■□□□□ 0.67
TIMP2-205ENST00000592761 IGF1RP08069 1367 aa19.23■□□□□ 0.67
TIMP2-205ENST00000592761 PHLDB1Q86UU1 1377 aa19.23■□□□□ 0.67
TIMP2-205ENST00000592761 BCANQ96GW7 911 aa19.22■□□□□ 0.67
TIMP2-205ENST00000592761 ANP32EQ9BTT0 268 aa19.2■□□□□ 0.66
TIMP2-205ENST00000592761 PPP1R15AO75807 674 aaPredicted RBP19.19■□□□□ 0.66
TIMP2-205ENST00000592761 FKBP8Q14318 412 aa19.17■□□□□ 0.66
TIMP2-205ENST00000592761 TARBP1Q13395 1621 aaKnown RBP19.16■□□□□ 0.66
TIMP2-205ENST00000592761 CFAP43Q8NDM7 1665 aa19.15■□□□□ 0.66
TIMP2-205ENST00000592761 FAM50AQ14320 339 aaKnown RBP19.14■□□□□ 0.66
TIMP2-205ENST00000592761 FGD5Q6ZNL6 1462 aa19.14■□□□□ 0.66
TIMP2-205ENST00000592761 EIF4G3O43432 1585 aaKnown RBP19.14■□□□□ 0.65
TIMP2-205ENST00000592761 CARMIL1Q5VZK9 1371 aa19.13■□□□□ 0.65
TIMP2-205ENST00000592761 POLA1P09884 1462 aaPredicted RBP19.12■□□□□ 0.65
TIMP2-205ENST00000592761 HIRIP3Q9BW71 556 aaPredicted RBP19.12■□□□□ 0.65
TIMP2-205ENST00000592761 PCF11O94913 1555 aaKnown RBP19.11■□□□□ 0.65
TIMP2-205ENST00000592761 OSCARQ8IYS5 282 aa19.11■□□□□ 0.65
TIMP2-205ENST00000592761 ZNF608Q9ULD9 1512 aaPredicted RBP19.08■□□□□ 0.64
TIMP2-205ENST00000592761 TIMELESSQ9UNS1 1208 aa19.08■□□□□ 0.64
TIMP2-205ENST00000592761 FHAD1B1AJZ9 1412 aa19.07■□□□□ 0.64
TIMP2-205ENST00000592761 P3H3Q8IVL6 736 aa19.06■□□□□ 0.64
TIMP2-205ENST00000592761 CCER2I3L3R5 266 aa19.04■□□□□ 0.64
TIMP2-205ENST00000592761 TRIM52Q96A61 297 aa19.04■□□□□ 0.64
TIMP2-205ENST00000592761 ATP1B4Q9UN42 357 aaPredicted RBP19.02■□□□□ 0.63
TIMP2-205ENST00000592761 RAD54L2Q9Y4B4 1467 aa19■□□□□ 0.63
TIMP2-205ENST00000592761 FHOD3Q2V2M9 1422 aa18.99■□□□□ 0.63
TIMP2-205ENST00000592761 ANP32CO43423 234 aa18.99■□□□□ 0.63
TIMP2-205ENST00000592761 RBM19Q9Y4C8 960 aaKnown RBP18.99■□□□□ 0.63
TIMP2-205ENST00000592761 NEFLP07196 543 aa18.98■□□□□ 0.63
TIMP2-205ENST00000592761 MAGI1Q96QZ7 1491 aaPredicted RBP18.97■□□□□ 0.63
TIMP2-205ENST00000592761 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.97■□□□□ 0.63
TIMP2-205ENST00000592761 FYCO1Q9BQS8 1478 aa18.96■□□□□ 0.63
TIMP2-205ENST00000592761 GRIN2BQ13224 1484 aa18.94■□□□□ 0.62
TIMP2-205ENST00000592761 AQRO60306 1485 aaKnown RBP eCLIP18.94■□□□□ 0.62
TIMP2-205ENST00000592761 CASKIN1Q8WXD9 1431 aa18.93■□□□□ 0.62
TIMP2-205ENST00000592761 ABCA10Q8WWZ4 1543 aa18.93■□□□□ 0.62
TIMP2-205ENST00000592761 CHD1O14646 1710 aa18.92■□□□□ 0.62
TIMP2-205ENST00000592761 TONSLQ96HA7 1378 aa18.91■□□□□ 0.62
TIMP2-205ENST00000592761 FGD6Q6ZV73 1430 aa18.91■□□□□ 0.62
TIMP2-205ENST00000592761 CCDC18Q5T9S5 1454 aa18.91■□□□□ 0.62
TIMP2-205ENST00000592761 PTPRKQ15262 1439 aa18.9■□□□□ 0.62
TIMP2-205ENST00000592761 EFCAB5A4FU69 1503 aa18.9■□□□□ 0.62
TIMP2-205ENST00000592761 ABCA5Q8WWZ7 1642 aa18.88■□□□□ 0.61
TIMP2-205ENST00000592761 PBRM1Q86U86 1689 aa18.87■□□□□ 0.61
TIMP2-205ENST00000592761 PTPN23Q9H3S7 1636 aa18.87■□□□□ 0.61
TIMP2-205ENST00000592761 KDM5BQ9UGL1 1544 aa18.86■□□□□ 0.61
TIMP2-205ENST00000592761 UACAQ9BZF9 1416 aa18.86■□□□□ 0.61
TIMP2-205ENST00000592761 SNAPC4Q5SXM2 1469 aa18.86■□□□□ 0.61
TIMP2-205ENST00000592761 HFM1A2PYH4 1435 aa18.85■□□□□ 0.61
TIMP2-205ENST00000592761 GAPVD1Q14C86 1478 aa18.85■□□□□ 0.61
TIMP2-205ENST00000592761 CTTNBP2Q8WZ74 1663 aa18.85■□□□□ 0.61
TIMP2-205ENST00000592761 SYNJ2O15056 1496 aa18.85■□□□□ 0.61
TIMP2-205ENST00000592761 TDRD9Q8NDG6 1382 aaKnown RBP18.84■□□□□ 0.61
TIMP2-205ENST00000592761 RIMBP3CA6NJZ7 1639 aa18.84■□□□□ 0.61
TIMP2-205ENST00000592761 RIMBP3BA6NNM3 1639 aa18.84■□□□□ 0.61
TIMP2-205ENST00000592761 RIMBP3Q9UFD9 1639 aa18.84■□□□□ 0.61
TIMP2-205ENST00000592761 LRRIQ1Q96JM4 1722 aa18.82■□□□□ 0.6
TIMP2-205ENST00000592761 BCL11AQ9H165 835 aa18.82■□□□□ 0.6
TIMP2-205ENST00000592761 NAIPQ13075 1403 aa18.81■□□□□ 0.6
TIMP2-205ENST00000592761 MSH5O43196 834 aa18.81■□□□□ 0.6
TIMP2-205ENST00000592761 ARHGEF11O15085 1522 aa18.81■□□□□ 0.6
TIMP2-205ENST00000592761 FMN1Q68DA7 1419 aa18.78■□□□□ 0.6
TIMP2-205ENST00000592761 CUL7Q14999 1698 aa18.78■□□□□ 0.6
TIMP2-205ENST00000592761 CLASP1Q7Z460 1538 aa18.78■□□□□ 0.6
TIMP2-205ENST00000592761 HNRNPUQ00839 825 aaKnown RBP eCLIP18.78■□□□□ 0.6
TIMP2-205ENST00000592761 MTUS2Q5JR59 1369 aa18.78■□□□□ 0.6
TIMP2-205ENST00000592761 IRX6P78412 446 aaPredicted RBP18.76■□□□□ 0.59
TIMP2-205ENST00000592761 CHMP7Q8WUX9 453 aaPredicted RBP18.75■□□□□ 0.59
TIMP2-205ENST00000592761 NCOA2Q15596 1464 aa18.75■□□□□ 0.59
TIMP2-205ENST00000592761 WASHC2AQ641Q2 1341 aa18.73■□□□□ 0.59
TIMP2-205ENST00000592761 MYOM3Q5VTT5 1437 aa18.73■□□□□ 0.59
TIMP2-205ENST00000592761 ADAMTS12P58397 1594 aa18.71■□□□□ 0.59
TIMP2-205ENST00000592761 SAMD9Q5K651 1589 aa18.71■□□□□ 0.59
TIMP2-205ENST00000592761 DENND4BO75064 1496 aaPredicted RBP18.7■□□□□ 0.58
TIMP2-205ENST00000592761 HSPA5P11021 654 aaKnown RBP18.7■□□□□ 0.58
TIMP2-205ENST00000592761 FBLN2P98095 1184 aa18.7■□□□□ 0.58
TIMP2-205ENST00000592761 SUPT6HQ7KZ85 1726 aaKnown RBP18.69■□□□□ 0.58
TIMP2-205ENST00000592761 FANCIQ9NVI1 1328 aa18.68■□□□□ 0.58
TIMP2-205ENST00000592761 CCDC184Q52MB2 194 aa18.68■□□□□ 0.58
TIMP2-205ENST00000592761 GRIN2AQ12879 1464 aa18.66■□□□□ 0.58
TIMP2-205ENST00000592761 MAGI3Q5TCQ9 1506 aa18.65■□□□□ 0.58
TIMP2-205ENST00000592761 UGGT2Q9NYU1 1516 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms