RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 TARBP1Q13395 1621 aaKnown RBP10.95□□□□□ -0.66
VPS4B-205ENST00000591383 EIF4G3O43432 1585 aaKnown RBP10.95□□□□□ -0.66
VPS4B-205ENST00000591383 IFT140Q96RY7 1462 aa10.95□□□□□ -0.66
VPS4B-205ENST00000591383 SPDYE4A6NLX3 237 aa10.95□□□□□ -0.66
VPS4B-205ENST00000591383 RAD54L2Q9Y4B4 1467 aa10.93□□□□□ -0.66
VPS4B-205ENST00000591383 MKRN4PQ13434 485 aaPredicted RBP10.91□□□□□ -0.66
VPS4B-205ENST00000591383 ZNF608Q9ULD9 1512 aaPredicted RBP10.9□□□□□ -0.66
VPS4B-205ENST00000591383 SOGA1O94964 1423 aa10.9□□□□□ -0.66
VPS4B-205ENST00000591383 PBRM1Q86U86 1689 aa10.89□□□□□ -0.67
VPS4B-205ENST00000591383 ABCA5Q8WWZ7 1642 aa10.87□□□□□ -0.67
VPS4B-205ENST00000591383 PROM2Q8N271 834 aa10.87□□□□□ -0.67
VPS4B-205ENST00000591383 ABCA10Q8WWZ4 1543 aa10.87□□□□□ -0.67
VPS4B-205ENST00000591383 AQRO60306 1485 aaKnown RBP eCLIP10.84□□□□□ -0.67
VPS4B-205ENST00000591383 TDRD9Q8NDG6 1382 aaKnown RBP10.83□□□□□ -0.68
VPS4B-205ENST00000591383 VASPP50552 380 aaPredicted RBP10.82□□□□□ -0.68
VPS4B-205ENST00000591383 GAPVD1Q14C86 1478 aa10.81□□□□□ -0.68
VPS4B-205ENST00000591383 TRIM41Q8WV44 630 aa10.81□□□□□ -0.68
VPS4B-205ENST00000591383 SNAPC4Q5SXM2 1469 aa10.81□□□□□ -0.68
VPS4B-205ENST00000591383 CHD1O14646 1710 aa10.8□□□□□ -0.68
VPS4B-205ENST00000591383 GRIN2BQ13224 1484 aa10.8□□□□□ -0.68
VPS4B-205ENST00000591383 ADAMTS12P58397 1594 aa10.79□□□□□ -0.68
VPS4B-205ENST00000591383 FBLN2P98095 1184 aa10.79□□□□□ -0.68
VPS4B-205ENST00000591383 PLCB2Q00722 1185 aa10.78□□□□□ -0.68
VPS4B-205ENST00000591383 KIF27Q86VH2 1401 aa10.76□□□□□ -0.69
VPS4B-205ENST00000591383 MAGI1Q96QZ7 1491 aaPredicted RBP10.76□□□□□ -0.69
VPS4B-205ENST00000591383 ERICH3Q5RHP9 1530 aa10.76□□□□□ -0.69
VPS4B-205ENST00000591383 CUL7Q14999 1698 aa10.76□□□□□ -0.69
VPS4B-205ENST00000591383 TRHP20396 242 aaPredicted RBP10.74□□□□□ -0.69
VPS4B-205ENST00000591383 IFNLR1Q8IU57 520 aaPredicted RBP10.74□□□□□ -0.69
VPS4B-205ENST00000591383 POLA2Q14181 598 aa10.73□□□□□ -0.69
VPS4B-205ENST00000591383 SPINK5Q9NQ38 1064 aaPredicted RBP10.73□□□□□ -0.69
VPS4B-205ENST00000591383 SYNJ2O15056 1496 aa10.71□□□□□ -0.69
VPS4B-205ENST00000591383 RUSC2Q8N2Y8 1516 aa10.71□□□□□ -0.69
VPS4B-205ENST00000591383 GRIN2AQ12879 1464 aa10.68□□□□□ -0.7
VPS4B-205ENST00000591383 FHAD1B1AJZ9 1412 aa10.67□□□□□ -0.7
VPS4B-205ENST00000591383 EEA1Q15075 1411 aa10.66□□□□□ -0.7
VPS4B-205ENST00000591383 CEP170Q5SW79 1584 aa10.65□□□□□ -0.71
VPS4B-205ENST00000591383 PKD2Q13563 968 aa10.64□□□□□ -0.71
VPS4B-205ENST00000591383 CHMP7Q8WUX9 453 aaPredicted RBP10.64□□□□□ -0.71
VPS4B-205ENST00000591383 IGF1RP08069 1367 aa10.64□□□□□ -0.71
VPS4B-205ENST00000591383 FAM9AQ8IZU1 332 aaPredicted RBP10.63□□□□□ -0.71
VPS4B-205ENST00000591383 CAPN15O75808 1086 aa10.62□□□□□ -0.71
VPS4B-205ENST00000591383 HAP1P54257 671 aaPredicted RBP10.62□□□□□ -0.71
VPS4B-205ENST00000591383 CLASP1Q7Z460 1538 aa10.62□□□□□ -0.71
VPS4B-205ENST00000591383 CTTNBP2Q8WZ74 1663 aa10.61□□□□□ -0.71
VPS4B-205ENST00000591383 CARMIL1Q5VZK9 1371 aa10.61□□□□□ -0.71
VPS4B-205ENST00000591383 KIF21BO75037 1637 aa10.6□□□□□ -0.71
VPS4B-205ENST00000591383 RNF39Q9H2S5 420 aa10.6□□□□□ -0.71
VPS4B-205ENST00000591383 RAPGEF2Q9Y4G8 1499 aa10.6□□□□□ -0.71
VPS4B-205ENST00000591383 NUP160Q12769 1436 aa10.58□□□□□ -0.72
VPS4B-205ENST00000591383 PRXQ9BXM0 1461 aa10.58□□□□□ -0.72
VPS4B-205ENST00000591383 OSCARQ8IYS5 282 aa10.56□□□□□ -0.72
VPS4B-205ENST00000591383 IQGAP2Q13576 1575 aa10.56□□□□□ -0.72
VPS4B-205ENST00000591383 ZBTB12Q9Y330 459 aaPredicted RBP10.55□□□□□ -0.72
VPS4B-205ENST00000591383 SHROOM2Q13796 1616 aa10.54□□□□□ -0.72
VPS4B-205ENST00000591383 GOLGA3Q08378 1498 aa10.54□□□□□ -0.72
VPS4B-205ENST00000591383 RIMBP3CA6NJZ7 1639 aa10.53□□□□□ -0.72
VPS4B-205ENST00000591383 RIMBP3BA6NNM3 1639 aa10.53□□□□□ -0.72
VPS4B-205ENST00000591383 RIMBP3Q9UFD9 1639 aa10.53□□□□□ -0.72
VPS4B-205ENST00000591383 ARHGEF11O15085 1522 aa10.52□□□□□ -0.73
VPS4B-205ENST00000591383 ABCB7O75027 752 aa10.51□□□□□ -0.73
VPS4B-205ENST00000591383 KIAA0586Q9BVV6 1533 aa10.51□□□□□ -0.73
VPS4B-205ENST00000591383 ERCC6L2Q5T890 1561 aa10.49□□□□□ -0.73
VPS4B-205ENST00000591383 C1QBPQ07021 282 aaKnown RBP10.49□□□□□ -0.73
VPS4B-205ENST00000591383 VSIG10Q8N0Z9 540 aa10.48□□□□□ -0.73
VPS4B-205ENST00000591383 SPOCK2Q92563 424 aa10.48□□□□□ -0.73
VPS4B-205ENST00000591383 KLHL34Q8N239 644 aa10.47□□□□□ -0.73
VPS4B-205ENST00000591383 BCANQ96GW7 911 aa10.46□□□□□ -0.73
VPS4B-205ENST00000591383 DNAJC5Q9H3Z4 198 aa10.46□□□□□ -0.73
VPS4B-205ENST00000591383 KIAA0556O60303 1618 aa10.46□□□□□ -0.74
VPS4B-205ENST00000591383 UGGT2Q9NYU1 1516 aa10.45□□□□□ -0.74
VPS4B-205ENST00000591383 PRG4Q92954 1404 aaPredicted RBP10.45□□□□□ -0.74
VPS4B-205ENST00000591383 ARAP1Q96P48 1450 aa10.44□□□□□ -0.74
VPS4B-205ENST00000591383 ECM2O94769 699 aaPredicted RBP10.43□□□□□ -0.74
VPS4B-205ENST00000591383 UBTFP17480 764 aaKnown RBP10.43□□□□□ -0.74
VPS4B-205ENST00000591383 BBXQ8WY36 941 aaPredicted RBP10.42□□□□□ -0.74
VPS4B-205ENST00000591383 ZNF692Q9BU19 519 aaPredicted RBP10.42□□□□□ -0.74
VPS4B-205ENST00000591383 STAG3Q9UJ98 1225 aa10.42□□□□□ -0.74
VPS4B-205ENST00000591383 SAMD9Q5K651 1589 aa10.42□□□□□ -0.74
VPS4B-205ENST00000591383 CARMIL2Q6F5E8 1435 aa10.41□□□□□ -0.74
VPS4B-205ENST00000591383 RANGAP1P46060 587 aaPredicted RBP10.41□□□□□ -0.74
VPS4B-205ENST00000591383 EFCAB5A4FU69 1503 aa10.41□□□□□ -0.74
VPS4B-205ENST00000591383 DISP1Q96F81 1524 aa10.41□□□□□ -0.74
VPS4B-205ENST00000591383 NPM1P06748 294 aaKnown RBP eCLIP10.4□□□□□ -0.74
VPS4B-205ENST00000591383 JPH4Q96JJ6 628 aa10.4□□□□□ -0.74
VPS4B-205ENST00000591383 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.4□□□□□ -0.74
VPS4B-205ENST00000591383 TTBK1Q5TCY1 1321 aaPredicted RBP10.38□□□□□ -0.75
VPS4B-205ENST00000591383 FHOD3Q2V2M9 1422 aa10.36□□□□□ -0.75
VPS4B-205ENST00000591383 PRKCSHP14314 528 aaPredicted RBP10.35□□□□□ -0.75
VPS4B-205ENST00000591383 PLCD3Q8N3E9 789 aa10.35□□□□□ -0.75
VPS4B-205ENST00000591383 KDM2AQ9Y2K7 1162 aa10.35□□□□□ -0.75
VPS4B-205ENST00000591383 SSUH2Q9Y2M2 353 aa10.35□□□□□ -0.75
VPS4B-205ENST00000591383 TNIKQ9UKE5 1360 aa10.35□□□□□ -0.75
VPS4B-205ENST00000591383 ADCY10Q96PN6 1610 aa10.34□□□□□ -0.75
VPS4B-205ENST00000591383 SPDYE2BA6NHP3 402 aa10.34□□□□□ -0.75
VPS4B-205ENST00000591383 SPDYE6P0CI01 402 aa10.34□□□□□ -0.75
VPS4B-205ENST00000591383 SPDYE2Q495Y8 402 aa10.34□□□□□ -0.75
VPS4B-205ENST00000591383 PAXIP1Q6ZW49 1069 aaPredicted RBP10.34□□□□□ -0.75
VPS4B-205ENST00000591383 CEP162Q5TB80 1403 aa10.33□□□□□ -0.76
VPS4B-205ENST00000591383 RGL2O15211 777 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms