RNA–Protein interactions for RNA: ENST00000589167.1

NEDD4L-226, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-226ENST00000589167 REM2Q8IYK8 340 aaPredicted RBP12.93□□□□□ -0.34
NEDD4L-226ENST00000589167 PRDM2Q13029 1718 aa12.92□□□□□ -0.34
NEDD4L-226ENST00000589167 MKRN4PQ13434 485 aaPredicted RBP12.92□□□□□ -0.34
NEDD4L-226ENST00000589167 SPDYE2BA6NHP3 402 aa12.84□□□□□ -0.35
NEDD4L-226ENST00000589167 SPDYE6P0CI01 402 aa12.84□□□□□ -0.35
NEDD4L-226ENST00000589167 SPDYE2Q495Y8 402 aa12.84□□□□□ -0.35
NEDD4L-226ENST00000589167 SP7Q8TDD2 431 aaPredicted RBP12.84□□□□□ -0.35
NEDD4L-226ENST00000589167 TOPBP1Q92547 1522 aa12.83□□□□□ -0.36
NEDD4L-226ENST00000589167 IFT140Q96RY7 1462 aa12.8□□□□□ -0.36
NEDD4L-226ENST00000589167 ZNF608Q9ULD9 1512 aaPredicted RBP12.8□□□□□ -0.36
NEDD4L-226ENST00000589167 PITPNM1O00562 1244 aa12.79□□□□□ -0.36
NEDD4L-226ENST00000589167 DNMBPQ6XZF7 1577 aa12.78□□□□□ -0.36
NEDD4L-226ENST00000589167 TRIM41Q8WV44 630 aa12.78□□□□□ -0.36
NEDD4L-226ENST00000589167 EIF4G3O43432 1585 aaKnown RBP12.75□□□□□ -0.37
NEDD4L-226ENST00000589167 ZNF692Q9BU19 519 aaPredicted RBP12.75□□□□□ -0.37
NEDD4L-226ENST00000589167 ABCC8Q09428 1581 aa12.73□□□□□ -0.37
NEDD4L-226ENST00000589167 PIP4P2Q8N4L2 257 aa12.72□□□□□ -0.37
NEDD4L-226ENST00000589167 POLA1P09884 1462 aaPredicted RBP12.71□□□□□ -0.38
NEDD4L-226ENST00000589167 TARBP1Q13395 1621 aaKnown RBP12.7□□□□□ -0.38
NEDD4L-226ENST00000589167 SSUH2Q9Y2M2 353 aa12.68□□□□□ -0.38
NEDD4L-226ENST00000589167 AQRO60306 1485 aaKnown RBP eCLIP12.66□□□□□ -0.38
NEDD4L-226ENST00000589167 RAD54L2Q9Y4B4 1467 aa12.65□□□□□ -0.38
NEDD4L-226ENST00000589167 FXR2P51116 673 aaKnown RBP eCLIP12.65□□□□□ -0.38
NEDD4L-226ENST00000589167 RIMBP3CA6NJZ7 1639 aa12.64□□□□□ -0.39
NEDD4L-226ENST00000589167 RIMBP3BA6NNM3 1639 aa12.64□□□□□ -0.39
NEDD4L-226ENST00000589167 RIMBP3Q9UFD9 1639 aa12.64□□□□□ -0.39
NEDD4L-226ENST00000589167 FGD5Q6ZNL6 1462 aa12.64□□□□□ -0.39
NEDD4L-226ENST00000589167 CUX1P39880 1505 aa12.63□□□□□ -0.39
NEDD4L-226ENST00000589167 CLEC11AQ9Y240 323 aa12.63□□□□□ -0.39
NEDD4L-226ENST00000589167 CHD1O14646 1710 aa12.62□□□□□ -0.39
NEDD4L-226ENST00000589167 SUPT5HO00267 1087 aaKnown RBP12.61□□□□□ -0.39
NEDD4L-226ENST00000589167 ARHGEF11O15085 1522 aa12.61□□□□□ -0.39
NEDD4L-226ENST00000589167 TDRD9Q8NDG6 1382 aaKnown RBP12.6□□□□□ -0.39
NEDD4L-226ENST00000589167 SPDYE1Q8NFV5 336 aaPredicted RBP12.6□□□□□ -0.39
NEDD4L-226ENST00000589167 SOGA1O94964 1423 aa12.6□□□□□ -0.39
NEDD4L-226ENST00000589167 SNAPC4Q5SXM2 1469 aa12.58□□□□□ -0.4
NEDD4L-226ENST00000589167 WDR97A6NE52 1622 aa12.55□□□□□ -0.4
NEDD4L-226ENST00000589167 GRIN2BQ13224 1484 aa12.52□□□□□ -0.41
NEDD4L-226ENST00000589167 MAGI1Q96QZ7 1491 aaPredicted RBP12.52□□□□□ -0.41
NEDD4L-226ENST00000589167 ARAP1Q96P48 1450 aa12.51□□□□□ -0.41
NEDD4L-226ENST00000589167 PBRM1Q86U86 1689 aa12.48□□□□□ -0.41
NEDD4L-226ENST00000589167 CLASP1Q7Z460 1538 aa12.48□□□□□ -0.41
NEDD4L-226ENST00000589167 HAX1O00165 279 aa12.48□□□□□ -0.41
NEDD4L-226ENST00000589167 ABCA5Q8WWZ7 1642 aa12.48□□□□□ -0.41
NEDD4L-226ENST00000589167 ABCA10Q8WWZ4 1543 aa12.47□□□□□ -0.41
NEDD4L-226ENST00000589167 GAPVD1Q14C86 1478 aa12.47□□□□□ -0.41
NEDD4L-226ENST00000589167 PRKAR2AP13861 404 aaKnown RBP12.47□□□□□ -0.41
NEDD4L-226ENST00000589167 SYNJ1O43426 1573 aa12.47□□□□□ -0.41
NEDD4L-226ENST00000589167 SYNJ2O15056 1496 aa12.46□□□□□ -0.41
NEDD4L-226ENST00000589167 CYB5RLQ6IPT4 315 aa12.45□□□□□ -0.42
NEDD4L-226ENST00000589167 CHMP7Q8WUX9 453 aaPredicted RBP12.45□□□□□ -0.42
NEDD4L-226ENST00000589167 BIVM-ERCC5R4GMW8 1640 aa12.43□□□□□ -0.42
NEDD4L-226ENST00000589167 WRNQ14191 1432 aaPredicted RBP eCLIP12.43□□□□□ -0.42
NEDD4L-226ENST00000589167 TOP2BQ02880 1626 aa12.42□□□□□ -0.42
NEDD4L-226ENST00000589167 PRR29P0C7W0 189 aa12.42□□□□□ -0.42
NEDD4L-226ENST00000589167 ADAMTS12P58397 1594 aa12.4□□□□□ -0.42
NEDD4L-226ENST00000589167 CHADLQ6NUI6 762 aa12.38□□□□□ -0.43
NEDD4L-226ENST00000589167 GRIN2AQ12879 1464 aa12.37□□□□□ -0.43
NEDD4L-226ENST00000589167 SPDYE4A6NLX3 237 aa12.36□□□□□ -0.43
NEDD4L-226ENST00000589167 EVX2Q03828 476 aa12.35□□□□□ -0.43
NEDD4L-226ENST00000589167 CEP170Q5SW79 1584 aa12.34□□□□□ -0.43
NEDD4L-226ENST00000589167 FHAD1B1AJZ9 1412 aa12.32□□□□□ -0.44
NEDD4L-226ENST00000589167 NUP160Q12769 1436 aa12.32□□□□□ -0.44
NEDD4L-226ENST00000589167 ERICH3Q5RHP9 1530 aa12.32□□□□□ -0.44
NEDD4L-226ENST00000589167 ERCC6L2Q5T890 1561 aa12.31□□□□□ -0.44
NEDD4L-226ENST00000589167 SHROOM2Q13796 1616 aa12.25□□□□□ -0.45
NEDD4L-226ENST00000589167 C19orf67A6NJJ6 358 aa12.23□□□□□ -0.45
NEDD4L-226ENST00000589167 RUSC2Q8N2Y8 1516 aa12.22□□□□□ -0.45
NEDD4L-226ENST00000589167 STAG3Q9UJ98 1225 aa12.21□□□□□ -0.45
NEDD4L-226ENST00000589167 PRG4Q92954 1404 aaPredicted RBP12.19□□□□□ -0.46
NEDD4L-226ENST00000589167 FARP1Q9Y4F1 1045 aaPredicted RBP12.17□□□□□ -0.46
NEDD4L-226ENST00000589167 KIF27Q86VH2 1401 aa12.17□□□□□ -0.46
NEDD4L-226ENST00000589167 CUL7Q14999 1698 aa12.16□□□□□ -0.46
NEDD4L-226ENST00000589167 IGF1RP08069 1367 aa12.14□□□□□ -0.47
NEDD4L-226ENST00000589167 JPH4Q96JJ6 628 aa12.13□□□□□ -0.47
NEDD4L-226ENST00000589167 CREBZFQ9NS37 354 aa12.12□□□□□ -0.47
NEDD4L-226ENST00000589167 KIAA0586Q9BVV6 1533 aa12.1□□□□□ -0.47
NEDD4L-226ENST00000589167 CARMIL1Q5VZK9 1371 aa12.07□□□□□ -0.48
NEDD4L-226ENST00000589167 CD44P16070 742 aaKnown RBP12.07□□□□□ -0.48
NEDD4L-226ENST00000589167 ADCY10Q96PN6 1610 aa12.07□□□□□ -0.48
NEDD4L-226ENST00000589167 GABBR2O75899 941 aa12.05□□□□□ -0.48
NEDD4L-226ENST00000589167 LHX8Q68G74 356 aa12.04□□□□□ -0.48
NEDD4L-226ENST00000589167 PROM2Q8N271 834 aa12.04□□□□□ -0.48
NEDD4L-226ENST00000589167 KIF13AQ9H1H9 1805 aa12.04□□□□□ -0.48
NEDD4L-226ENST00000589167 IQGAP2Q13576 1575 aa12.03□□□□□ -0.48
NEDD4L-226ENST00000589167 MAPKBP1O60336 1514 aa12.02□□□□□ -0.48
NEDD4L-226ENST00000589167 DIP2BQ9P265 1576 aa12.01□□□□□ -0.49
NEDD4L-226ENST00000589167 ABCC10Q5T3U5 1492 aa12.01□□□□□ -0.49
NEDD4L-226ENST00000589167 TTBK1Q5TCY1 1321 aaPredicted RBP12□□□□□ -0.49
NEDD4L-226ENST00000589167 RAPGEF2Q9Y4G8 1499 aa11.98□□□□□ -0.49
NEDD4L-226ENST00000589167 PTPRGP23470 1445 aa11.98□□□□□ -0.49
NEDD4L-226ENST00000589167 CARMIL2Q6F5E8 1435 aa11.98□□□□□ -0.49
NEDD4L-226ENST00000589167 NPM1P06748 294 aaKnown RBP eCLIP11.98□□□□□ -0.49
NEDD4L-226ENST00000589167 FAM69CQ0P6D2 419 aa11.97□□□□□ -0.49
NEDD4L-226ENST00000589167 DISP1Q96F81 1524 aa11.96□□□□□ -0.49
NEDD4L-226ENST00000589167 TNIKQ9UKE5 1360 aa11.96□□□□□ -0.49
NEDD4L-226ENST00000589167 ZRANB1Q9UGI0 708 aa11.94□□□□□ -0.5
NEDD4L-226ENST00000589167 ABCC2Q92887 1545 aa11.94□□□□□ -0.5
NEDD4L-226ENST00000589167 UGGT2Q9NYU1 1516 aa11.93□□□□□ -0.5
NEDD4L-226ENST00000589167 FKBP8Q14318 412 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms