RNA–Protein interactions for RNA: ENST00000588852.1

SAFB-205, Transcript of scaffold attachment factor B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SAFB, Length 2,842 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-205ENST00000588852 MYT1Q01538 1121 aa22.03■■□□□ 1.12
SAFB-205ENST00000588852 MAPKBP1O60336 1514 aa22.03■■□□□ 1.12
SAFB-205ENST00000588852 CADPSQ9ULU8 1353 aa22.02■■□□□ 1.12
SAFB-205ENST00000588852 TIAM1Q13009 1591 aa22■■□□□ 1.11
SAFB-205ENST00000588852 LRRC9Q6ZRR7 1453 aa21.98■■□□□ 1.11
SAFB-205ENST00000588852 DDX10Q13206 875 aaKnown RBP21.98■■□□□ 1.11
SAFB-205ENST00000588852 SETD5Q9C0A6 1442 aa21.96■■□□□ 1.11
SAFB-205ENST00000588852 FHOD3Q2V2M9 1422 aa21.93■■□□□ 1.1
SAFB-205ENST00000588852 RAD54L2Q9Y4B4 1467 aa21.92■■□□□ 1.1
SAFB-205ENST00000588852 WDR97A6NE52 1622 aa21.91■■□□□ 1.1
SAFB-205ENST00000588852 CC2D2AQ9P2K1 1620 aa21.89■■□□□ 1.09
SAFB-205ENST00000588852 PCF11O94913 1555 aaKnown RBP21.87■■□□□ 1.09
SAFB-205ENST00000588852 BCANQ96GW7 911 aa21.85■■□□□ 1.09
SAFB-205ENST00000588852 PRDM2Q13029 1718 aa21.85■■□□□ 1.09
SAFB-205ENST00000588852 FANCD2Q9BXW9 1451 aa21.83■■□□□ 1.08
SAFB-205ENST00000588852 MAP3K1Q13233 1512 aa21.82■■□□□ 1.08
SAFB-205ENST00000588852 FHAD1B1AJZ9 1412 aa21.81■■□□□ 1.08
SAFB-205ENST00000588852 NESP48681 1621 aa21.8■■□□□ 1.08
SAFB-205ENST00000588852 DNAJC5BQ9UF47 199 aa21.79■■□□□ 1.08
SAFB-205ENST00000588852 PPP1R15AO75807 674 aaPredicted RBP21.75■■□□□ 1.07
SAFB-205ENST00000588852 POLA1P09884 1462 aaPredicted RBP21.73■■□□□ 1.07
SAFB-205ENST00000588852 TRIM52Q96A61 297 aa21.73■■□□□ 1.07
SAFB-205ENST00000588852 TSHZ2Q9NRE2 1034 aa21.73■■□□□ 1.07
SAFB-205ENST00000588852 CFAP43Q8NDM7 1665 aa21.71■■□□□ 1.07
SAFB-205ENST00000588852 FKBP8Q14318 412 aa21.69■■□□□ 1.06
SAFB-205ENST00000588852 TOPBP1Q92547 1522 aa21.69■■□□□ 1.06
SAFB-205ENST00000588852 TDRD9Q8NDG6 1382 aaKnown RBP21.68■■□□□ 1.06
SAFB-205ENST00000588852 PTPRKQ15262 1439 aa21.68■■□□□ 1.06
SAFB-205ENST00000588852 CASKIN1Q8WXD9 1431 aa21.66■■□□□ 1.06
SAFB-205ENST00000588852 ABCA10Q8WWZ4 1543 aa21.65■■□□□ 1.06
SAFB-205ENST00000588852 FYCO1Q9BQS8 1478 aa21.65■■□□□ 1.06
SAFB-205ENST00000588852 MTUS2Q5JR59 1369 aa21.64■■□□□ 1.05
SAFB-205ENST00000588852 FGD6Q6ZV73 1430 aa21.63■■□□□ 1.05
SAFB-205ENST00000588852 DNMBPQ6XZF7 1577 aa21.63■■□□□ 1.05
SAFB-205ENST00000588852 TONSLQ96HA7 1378 aa21.6■■□□□ 1.05
SAFB-205ENST00000588852 ARID3CA6NKF2 412 aa21.6■■□□□ 1.05
SAFB-205ENST00000588852 CHIC2Q9UKJ5 165 aa21.6■■□□□ 1.05
SAFB-205ENST00000588852 ANP32CO43423 234 aa21.58■■□□□ 1.05
SAFB-205ENST00000588852 CCDC18Q5T9S5 1454 aa21.58■■□□□ 1.04
SAFB-205ENST00000588852 RRP7BPQ9NSQ0 103 aa21.57■■□□□ 1.04
SAFB-205ENST00000588852 TIMELESSQ9UNS1 1208 aa21.56■■□□□ 1.04
SAFB-205ENST00000588852 SNAPC4Q5SXM2 1469 aa21.56■■□□□ 1.04
SAFB-205ENST00000588852 AQRO60306 1485 aaKnown RBP eCLIP21.55■■□□□ 1.041e-7■■■■□ 25.6
SAFB-205ENST00000588852 EFCAB5A4FU69 1503 aa21.55■■□□□ 1.04
SAFB-205ENST00000588852 FMN1Q68DA7 1419 aa21.54■■□□□ 1.04
SAFB-205ENST00000588852 URB2Q14146 1524 aaKnown RBP21.53■■□□□ 1.04
SAFB-205ENST00000588852 CTTNBP2Q8WZ74 1663 aa21.52■■□□□ 1.03
SAFB-205ENST00000588852 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.51■■□□□ 1.03
SAFB-205ENST00000588852 LRRIQ1Q96JM4 1722 aa21.5■■□□□ 1.03
SAFB-205ENST00000588852 NCOA2Q15596 1464 aa21.5■■□□□ 1.03
SAFB-205ENST00000588852 NAIPQ13075 1403 aa21.49■■□□□ 1.03
SAFB-205ENST00000588852 HFM1A2PYH4 1435 aa21.48■■□□□ 1.03
SAFB-205ENST00000588852 CUL7Q14999 1698 aa21.48■■□□□ 1.03
SAFB-205ENST00000588852 UACAQ9BZF9 1416 aa21.48■■□□□ 1.03
SAFB-205ENST00000588852 CCER2I3L3R5 266 aa21.46■■□□□ 1.03
SAFB-205ENST00000588852 FOXD1Q16676 465 aa21.46■■□□□ 1.03
SAFB-205ENST00000588852 PTPN23Q9H3S7 1636 aa21.46■■□□□ 1.03
SAFB-205ENST00000588852 MYOM3Q5VTT5 1437 aa21.44■■□□□ 1.02
SAFB-205ENST00000588852 GAPVD1Q14C86 1478 aa21.43■■□□□ 1.02
SAFB-205ENST00000588852 MAGI3Q5TCQ9 1506 aa21.41■■□□□ 1.02
SAFB-205ENST00000588852 GRIN2BQ13224 1484 aa21.41■■□□□ 1.02
SAFB-205ENST00000588852 NEFLP07196 543 aa21.41■■□□□ 1.02
SAFB-205ENST00000588852 IRX6P78412 446 aaPredicted RBP21.41■■□□□ 1.02
SAFB-205ENST00000588852 HSPA5P11021 654 aaKnown RBP21.37■■□□□ 1.01
SAFB-205ENST00000588852 SAMD9Q5K651 1589 aa21.37■■□□□ 1.01
SAFB-205ENST00000588852 HNRNPUQ00839 825 aaKnown RBP eCLIP21.37■■□□□ 1.014e-7■□□□□ 8.3
SAFB-205ENST00000588852 WASHC2AQ641Q2 1341 aa21.37■■□□□ 1.01
SAFB-205ENST00000588852 KDM5BQ9UGL1 1544 aa21.37■■□□□ 1.01
SAFB-205ENST00000588852 CCDC184Q52MB2 194 aa21.35■■□□□ 1.01
SAFB-205ENST00000588852 DENND4BO75064 1496 aaPredicted RBP21.34■■□□□ 1.01
SAFB-205ENST00000588852 ABCA5Q8WWZ7 1642 aa21.34■■□□□ 1.01
SAFB-205ENST00000588852 KDM6BO15054 1643 aa21.33■■□□□ 1
SAFB-205ENST00000588852 SUPT6HQ7KZ85 1726 aaKnown RBP21.31■■□□□ 1
SAFB-205ENST00000588852 C11orf95C9JLR9 678 aaPredicted RBP21.31■■□□□ 1
SAFB-205ENST00000588852 RBM19Q9Y4C8 960 aaKnown RBP21.3■■□□□ 1
SAFB-205ENST00000588852 L3MBTL2Q969R5 705 aa21.29■■□□□ 1
SAFB-205ENST00000588852 MPHOSPH9Q99550 1183 aa21.29■■□□□ 1
SAFB-205ENST00000588852 UGGT2Q9NYU1 1516 aa21.29■■□□□ 1
SAFB-205ENST00000588852 CDK13Q14004 1512 aaKnown RBP21.28■■□□□ 1
SAFB-205ENST00000588852 ANP32EQ9BTT0 268 aa21.28■■□□□ 1
SAFB-205ENST00000588852 EHBP1L1Q8N3D4 1523 aa21.27■■□□□ 1
SAFB-205ENST00000588852 LAMC3Q9Y6N6 1575 aa21.27■■□□□ 1
SAFB-205ENST00000588852 ZNF644Q9H582 1327 aaPredicted RBP21.25■□□□□ 0.99
SAFB-205ENST00000588852 CNGB1Q14028 1251 aaPredicted RBP21.25■□□□□ 0.99
SAFB-205ENST00000588852 EIF4G2P78344 907 aaKnown RBP eCLIP21.23■□□□□ 0.99
SAFB-205ENST00000588852 PDS5BQ9NTI5 1447 aa21.22■□□□□ 0.99
SAFB-205ENST00000588852 ARHGEF11O15085 1522 aa21.22■□□□□ 0.99
SAFB-205ENST00000588852 KIF21AQ7Z4S6 1674 aa21.21■□□□□ 0.99
SAFB-205ENST00000588852 EPRSP07814 1512 aaKnown RBP21.21■□□□□ 0.99
SAFB-205ENST00000588852 NBPF8Q3BBV2 869 aa21.2■□□□□ 0.98
SAFB-205ENST00000588852 FAM9BQ8IZU0 186 aa21.2■□□□□ 0.98
SAFB-205ENST00000588852 TARBP1Q13395 1621 aaKnown RBP21.16■□□□□ 0.98
SAFB-205ENST00000588852 THOC2Q8NI27 1593 aaKnown RBP21.16■□□□□ 0.98
SAFB-205ENST00000588852 TCOF1Q13428 1488 aaKnown RBP21.15■□□□□ 0.98
SAFB-205ENST00000588852 SENP3-EIF4A1A0A087X0R7 540 aa21.15■□□□□ 0.98
SAFB-205ENST00000588852 SLC4A1APQ9BWU0 796 aaKnown RBP21.11■□□□□ 0.97
SAFB-205ENST00000588852 HECW1Q76N89 1606 aa21.11■□□□□ 0.97
SAFB-205ENST00000588852 PRKRIP1Q9H875 184 aaPredicted RBP21.11■□□□□ 0.97
SAFB-205ENST00000588852 IQGAP2Q13576 1575 aa21.11■□□□□ 0.97
SAFB-205ENST00000588852 GCC2Q8IWJ2 1684 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms