RNA–Protein interactions for RNA: ENST00000588361.1

KDM4B-206, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,039 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-206ENST00000588361 RAD54L2Q9Y4B4 1467 aa22.12■■□□□ 1.13
KDM4B-206ENST00000588361 TSHZ2Q9NRE2 1034 aa22.12■■□□□ 1.13
KDM4B-206ENST00000588361 PHLDB1Q86UU1 1377 aa22.11■■□□□ 1.13
KDM4B-206ENST00000588361 FANCD2Q9BXW9 1451 aa22.09■■□□□ 1.13
KDM4B-206ENST00000588361 ANP32EQ9BTT0 268 aa22.09■■□□□ 1.13
KDM4B-206ENST00000588361 FHOD3Q2V2M9 1422 aa22.07■■□□□ 1.12
KDM4B-206ENST00000588361 CC2D2AQ9P2K1 1620 aa22.05■■□□□ 1.12
KDM4B-206ENST00000588361 NESP48681 1621 aa22.05■■□□□ 1.12
KDM4B-206ENST00000588361 HIRIP3Q9BW71 556 aaPredicted RBP22.04■■□□□ 1.12
KDM4B-206ENST00000588361 LRRC9Q6ZRR7 1453 aa22.04■■□□□ 1.12
KDM4B-206ENST00000588361 TIAM1Q13009 1591 aa22.04■■□□□ 1.12
KDM4B-206ENST00000588361 KCNH8Q96L42 1107 aa22.03■■□□□ 1.12
KDM4B-206ENST00000588361 SETD5Q9C0A6 1442 aa22.02■■□□□ 1.11
KDM4B-206ENST00000588361 BCANQ96GW7 911 aa22.01■■□□□ 1.11
KDM4B-206ENST00000588361 FHAD1B1AJZ9 1412 aa21.98■■□□□ 1.11
KDM4B-206ENST00000588361 DDX10Q13206 875 aaKnown RBP21.97■■□□□ 1.11
KDM4B-206ENST00000588361 PRDM2Q13029 1718 aa21.94■■□□□ 1.1
KDM4B-206ENST00000588361 TDRD9Q8NDG6 1382 aaKnown RBP21.94■■□□□ 1.1
KDM4B-206ENST00000588361 POLA1P09884 1462 aaPredicted RBP21.94■■□□□ 1.1
KDM4B-206ENST00000588361 DNAJC5BQ9UF47 199 aa21.93■■□□□ 1.1
KDM4B-206ENST00000588361 MAPKBP1O60336 1514 aa21.93■■□□□ 1.1
KDM4B-206ENST00000588361 PCF11O94913 1555 aaKnown RBP21.92■■□□□ 1.1
KDM4B-206ENST00000588361 TOPBP1Q92547 1522 aa21.9■■□□□ 1.1
KDM4B-206ENST00000588361 MAP3K1Q13233 1512 aa21.86■■□□□ 1.09
KDM4B-206ENST00000588361 ARID3CA6NKF2 412 aa21.85■■□□□ 1.09
KDM4B-206ENST00000588361 MTUS2Q5JR59 1369 aa21.84■■□□□ 1.09
KDM4B-206ENST00000588361 ABCA10Q8WWZ4 1543 aa21.84■■□□□ 1.09
KDM4B-206ENST00000588361 DNMBPQ6XZF7 1577 aa21.83■■□□□ 1.09
KDM4B-206ENST00000588361 WDR97A6NE52 1622 aa21.82■■□□□ 1.08
KDM4B-206ENST00000588361 CASKIN1Q8WXD9 1431 aa21.78■■□□□ 1.08
KDM4B-206ENST00000588361 CHIC2Q9UKJ5 165 aa21.77■■□□□ 1.07
KDM4B-206ENST00000588361 FYCO1Q9BQS8 1478 aa21.75■■□□□ 1.07
KDM4B-206ENST00000588361 PPP1R15AO75807 674 aaPredicted RBP21.75■■□□□ 1.07
KDM4B-206ENST00000588361 URB2Q14146 1524 aaKnown RBP21.74■■□□□ 1.07
KDM4B-206ENST00000588361 FMN1Q68DA7 1419 aa21.73■■□□□ 1.07
KDM4B-206ENST00000588361 FKBP8Q14318 412 aa21.72■■□□□ 1.07
KDM4B-206ENST00000588361 FGD6Q6ZV73 1430 aa21.72■■□□□ 1.07
KDM4B-206ENST00000588361 RRP7BPQ9NSQ0 103 aa21.72■■□□□ 1.07
KDM4B-206ENST00000588361 CFAP43Q8NDM7 1665 aa21.71■■□□□ 1.07
KDM4B-206ENST00000588361 TONSLQ96HA7 1378 aa21.7■■□□□ 1.06
KDM4B-206ENST00000588361 PTPRKQ15262 1439 aa21.68■■□□□ 1.06
KDM4B-206ENST00000588361 EFCAB5A4FU69 1503 aa21.68■■□□□ 1.06
KDM4B-206ENST00000588361 TRIM52Q96A61 297 aa21.68■■□□□ 1.06
KDM4B-206ENST00000588361 GAPVD1Q14C86 1478 aa21.67■■□□□ 1.06
KDM4B-206ENST00000588361 CCDC18Q5T9S5 1454 aa21.63■■□□□ 1.05
KDM4B-206ENST00000588361 CUL7Q14999 1698 aa21.62■■□□□ 1.05
KDM4B-206ENST00000588361 ANP32CO43423 234 aa21.62■■□□□ 1.05
KDM4B-206ENST00000588361 AQRO60306 1485 aaKnown RBP eCLIP21.62■■□□□ 1.057e-7■■■■□ 20
KDM4B-206ENST00000588361 SNAPC4Q5SXM2 1469 aa21.62■■□□□ 1.05
KDM4B-206ENST00000588361 TIMELESSQ9UNS1 1208 aa21.62■■□□□ 1.05
KDM4B-206ENST00000588361 RBM19Q9Y4C8 960 aaKnown RBP21.61■■□□□ 1.05
KDM4B-206ENST00000588361 NCOA2Q15596 1464 aa21.6■■□□□ 1.05
KDM4B-206ENST00000588361 CTTNBP2Q8WZ74 1663 aa21.59■■□□□ 1.05
KDM4B-206ENST00000588361 PDS5BQ9NTI5 1447 aa21.59■■□□□ 1.05
KDM4B-206ENST00000588361 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.57■■□□□ 1.042e-6■■■■□ 21.4
KDM4B-206ENST00000588361 MYOM3Q5VTT5 1437 aa21.55■■□□□ 1.04
KDM4B-206ENST00000588361 FOXD1Q16676 465 aa21.55■■□□□ 1.04
KDM4B-206ENST00000588361 HFM1A2PYH4 1435 aa21.53■■□□□ 1.04
KDM4B-206ENST00000588361 LAMC3Q9Y6N6 1575 aa21.53■■□□□ 1.04
KDM4B-206ENST00000588361 NAIPQ13075 1403 aa21.53■■□□□ 1.04
KDM4B-206ENST00000588361 UACAQ9BZF9 1416 aa21.52■■□□□ 1.04
KDM4B-206ENST00000588361 GRIN2BQ13224 1484 aa21.5■■□□□ 1.03
KDM4B-206ENST00000588361 ABCA5Q8WWZ7 1642 aa21.47■■□□□ 1.03
KDM4B-206ENST00000588361 MSH5O43196 834 aa21.47■■□□□ 1.03
KDM4B-206ENST00000588361 PTPN23Q9H3S7 1636 aa21.46■■□□□ 1.03
KDM4B-206ENST00000588361 LRRIQ1Q96JM4 1722 aa21.45■■□□□ 1.02
KDM4B-206ENST00000588361 SAMD9Q5K651 1589 aa21.44■■□□□ 1.02
KDM4B-206ENST00000588361 MAGI3Q5TCQ9 1506 aa21.44■■□□□ 1.02
KDM4B-206ENST00000588361 NEFLP07196 543 aa21.42■■□□□ 1.02
KDM4B-206ENST00000588361 CCER2I3L3R5 266 aa21.42■■□□□ 1.02
KDM4B-206ENST00000588361 HSPA5P11021 654 aaKnown RBP21.41■■□□□ 1.02
KDM4B-206ENST00000588361 KIF21AQ7Z4S6 1674 aa21.41■■□□□ 1.02
KDM4B-206ENST00000588361 CDK13Q14004 1512 aaKnown RBP21.4■■□□□ 1.02
KDM4B-206ENST00000588361 SUPT6HQ7KZ85 1726 aaKnown RBP21.4■■□□□ 1.02
KDM4B-206ENST00000588361 MPHOSPH9Q99550 1183 aa21.39■■□□□ 1.02
KDM4B-206ENST00000588361 ZNF644Q9H582 1327 aaPredicted RBP21.39■■□□□ 1.01
KDM4B-206ENST00000588361 EHBP1L1Q8N3D4 1523 aa21.38■■□□□ 1.01
KDM4B-206ENST00000588361 CNGB1Q14028 1251 aaPredicted RBP21.37■■□□□ 1.01
KDM4B-206ENST00000588361 HNRNPUQ00839 825 aaKnown RBP eCLIP21.36■■□□□ 1.01
KDM4B-206ENST00000588361 L3MBTL2Q969R5 705 aa21.36■■□□□ 1.01
KDM4B-206ENST00000588361 UGGT2Q9NYU1 1516 aa21.35■■□□□ 1.01
KDM4B-206ENST00000588361 FBLN2P98095 1184 aa21.34■■□□□ 1.01
KDM4B-206ENST00000588361 EPRSP07814 1512 aaKnown RBP21.34■■□□□ 1.01
KDM4B-206ENST00000588361 WASHC2AQ641Q2 1341 aa21.33■■□□□ 1.01
KDM4B-206ENST00000588361 EIF4G2P78344 907 aaKnown RBP eCLIP21.32■■□□□ 1
KDM4B-206ENST00000588361 IRX6P78412 446 aaPredicted RBP21.32■■□□□ 1
KDM4B-206ENST00000588361 ZNF777Q9ULD5 760 aaPredicted RBP21.32■■□□□ 1
KDM4B-206ENST00000588361 TARBP1Q13395 1621 aaKnown RBP21.32■■□□□ 1
KDM4B-206ENST00000588361 ZNF608Q9ULD9 1512 aaPredicted RBP21.29■■□□□ 1
KDM4B-206ENST00000588361 KDM6BO15054 1643 aa21.29■■□□□ 1
KDM4B-206ENST00000588361 IQGAP2Q13576 1575 aa21.28■■□□□ 1
KDM4B-206ENST00000588361 SLC4A1APQ9BWU0 796 aaKnown RBP21.28■■□□□ 1
KDM4B-206ENST00000588361 C11orf95C9JLR9 678 aaPredicted RBP21.26■□□□□ 0.99
KDM4B-206ENST00000588361 THOC2Q8NI27 1593 aaKnown RBP21.26■□□□□ 0.99
KDM4B-206ENST00000588361 DENND4BO75064 1496 aaPredicted RBP21.26■□□□□ 0.99
KDM4B-206ENST00000588361 CCDC184Q52MB2 194 aa21.25■□□□□ 0.99
KDM4B-206ENST00000588361 ZNF326Q5BKZ1 582 aaKnown RBP21.25■□□□□ 0.99
KDM4B-206ENST00000588361 POLR3GLQ9BT43 218 aa21.25■□□□□ 0.99
KDM4B-206ENST00000588361 HECW1Q76N89 1606 aa21.24■□□□□ 0.99
KDM4B-206ENST00000588361 ERICH6Q7L0X2 663 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms