RNA–Protein interactions for RNA: ENST00000587795.1

ZNF440-205, Transcript of zinc finger protein 440, humanhuman

Gene ZNF440, Length 1,659 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-205ENST00000587795 CUX2O14529 1486 aa15.55■□□□□ 0.08
ZNF440-205ENST00000587795 URB2Q14146 1524 aaKnown RBP15.53■□□□□ 0.08
ZNF440-205ENST00000587795 ABCC8Q09428 1581 aa15.52■□□□□ 0.07
ZNF440-205ENST00000587795 DNMBPQ6XZF7 1577 aa15.51■□□□□ 0.07
ZNF440-205ENST00000587795 VASPP50552 380 aaPredicted RBP15.49■□□□□ 0.07
ZNF440-205ENST00000587795 TOPBP1Q92547 1522 aa15.48■□□□□ 0.07
ZNF440-205ENST00000587795 SLC24A1O60721 1099 aa15.44■□□□□ 0.06
ZNF440-205ENST00000587795 CUX1P39880 1505 aa15.43■□□□□ 0.06
ZNF440-205ENST00000587795 ZNF692Q9BU19 519 aaPredicted RBP15.41■□□□□ 0.06
ZNF440-205ENST00000587795 BIVM-ERCC5R4GMW8 1640 aa15.41■□□□□ 0.06
ZNF440-205ENST00000587795 OSCARQ8IYS5 282 aa15.39■□□□□ 0.05
ZNF440-205ENST00000587795 TOP2BQ02880 1626 aa15.39■□□□□ 0.05
ZNF440-205ENST00000587795 WRNQ14191 1432 aaPredicted RBP eCLIP15.39■□□□□ 0.05
ZNF440-205ENST00000587795 SYNJ1O43426 1573 aa15.37■□□□□ 0.05
ZNF440-205ENST00000587795 POLA1P09884 1462 aaPredicted RBP15.36■□□□□ 0.05
ZNF440-205ENST00000587795 CACNB1Q02641 598 aaPredicted RBP15.36■□□□□ 0.05
ZNF440-205ENST00000587795 IFNLR1Q8IU57 520 aaPredicted RBP15.35■□□□□ 0.05
ZNF440-205ENST00000587795 SPDYE2BA6NHP3 402 aa15.34■□□□□ 0.05
ZNF440-205ENST00000587795 SPDYE6P0CI01 402 aa15.34■□□□□ 0.05
ZNF440-205ENST00000587795 SPDYE2Q495Y8 402 aa15.34■□□□□ 0.05
ZNF440-205ENST00000587795 FGD5Q6ZNL6 1462 aa15.34■□□□□ 0.05
ZNF440-205ENST00000587795 TARBP1Q13395 1621 aaKnown RBP15.33■□□□□ 0.04
ZNF440-205ENST00000587795 IFT140Q96RY7 1462 aa15.33■□□□□ 0.04
ZNF440-205ENST00000587795 WDR97A6NE52 1622 aa15.3■□□□□ 0.04
ZNF440-205ENST00000587795 SSUH2Q9Y2M2 353 aa15.28■□□□□ 0.04
ZNF440-205ENST00000587795 SOGA1O94964 1423 aa15.26■□□□□ 0.03
ZNF440-205ENST00000587795 RAD54L2Q9Y4B4 1467 aa15.25■□□□□ 0.03
ZNF440-205ENST00000587795 ABCA10Q8WWZ4 1543 aa15.24■□□□□ 0.03
ZNF440-205ENST00000587795 EIF4G3O43432 1585 aaKnown RBP15.23■□□□□ 0.03
ZNF440-205ENST00000587795 ZNF608Q9ULD9 1512 aaPredicted RBP15.22■□□□□ 0.03
ZNF440-205ENST00000587795 ABCA5Q8WWZ7 1642 aa15.19■□□□□ 0.02
ZNF440-205ENST00000587795 STAG3Q9UJ98 1225 aa15.19■□□□□ 0.02
ZNF440-205ENST00000587795 PBRM1Q86U86 1689 aa15.14■□□□□ 0.01
ZNF440-205ENST00000587795 AQRO60306 1485 aaKnown RBP eCLIP15.13■□□□□ 0.01
ZNF440-205ENST00000587795 KLHL34Q8N239 644 aa15.13■□□□□ 0.01
ZNF440-205ENST00000587795 TDRD9Q8NDG6 1382 aaKnown RBP15.12■□□□□ 0.01
ZNF440-205ENST00000587795 GAPVD1Q14C86 1478 aa15.11■□□□□ 0.01
ZNF440-205ENST00000587795 GRIN2BQ13224 1484 aa15.09■□□□□ 0.01
ZNF440-205ENST00000587795 TRIM41Q8WV44 630 aa15.08■□□□□ 0
ZNF440-205ENST00000587795 PLCD3Q8N3E9 789 aa15.07■□□□□ 0
ZNF440-205ENST00000587795 ERICH3Q5RHP9 1530 aa15.07■□□□□ 0
ZNF440-205ENST00000587795 MAGI1Q96QZ7 1491 aaPredicted RBP15.06■□□□□ 0
ZNF440-205ENST00000587795 PKD2Q13563 968 aa15.06■□□□□ 0
ZNF440-205ENST00000587795 SPOCK2Q92563 424 aa15.06■□□□□ 0
ZNF440-205ENST00000587795 KIF27Q86VH2 1401 aa15.05■□□□□ 0
ZNF440-205ENST00000587795 MIER1Q8N108 512 aa15.05■□□□□ -0
ZNF440-205ENST00000587795 SNAPC4Q5SXM2 1469 aa15.03■□□□□ -0
ZNF440-205ENST00000587795 ADAMTS12P58397 1594 aa15.01□□□□□ -0.01
ZNF440-205ENST00000587795 CHD1O14646 1710 aa15.01□□□□□ -0.01
ZNF440-205ENST00000587795 DNAJC5Q9H3Z4 198 aa15□□□□□ -0.01
ZNF440-205ENST00000587795 CUL7Q14999 1698 aa14.99□□□□□ -0.01
ZNF440-205ENST00000587795 SYNJ2O15056 1496 aa14.98□□□□□ -0.01
ZNF440-205ENST00000587795 FHAD1B1AJZ9 1412 aa14.95□□□□□ -0.02
ZNF440-205ENST00000587795 IGF1RP08069 1367 aa14.94□□□□□ -0.02
ZNF440-205ENST00000587795 RUSC2Q8N2Y8 1516 aa14.94□□□□□ -0.02
ZNF440-205ENST00000587795 EEA1Q15075 1411 aa14.93□□□□□ -0.02
ZNF440-205ENST00000587795 GRIN2AQ12879 1464 aa14.9□□□□□ -0.02
ZNF440-205ENST00000587795 PLEKHG5O94827 1062 aa14.87□□□□□ -0.03
ZNF440-205ENST00000587795 CHMP7Q8WUX9 453 aaPredicted RBP14.87□□□□□ -0.03
ZNF440-205ENST00000587795 ECM2O94769 699 aaPredicted RBP14.86□□□□□ -0.03
ZNF440-205ENST00000587795 CARMIL1Q5VZK9 1371 aa14.85□□□□□ -0.03
ZNF440-205ENST00000587795 CLASP1Q7Z460 1538 aa14.85□□□□□ -0.03
ZNF440-205ENST00000587795 NUP160Q12769 1436 aa14.85□□□□□ -0.03
ZNF440-205ENST00000587795 PRXQ9BXM0 1461 aa14.84□□□□□ -0.03
ZNF440-205ENST00000587795 CEP170Q5SW79 1584 aa14.83□□□□□ -0.04
ZNF440-205ENST00000587795 RBM42Q9BTD8 480 aaKnown RBP14.83□□□□□ -0.04
ZNF440-205ENST00000587795 PLCB2Q00722 1185 aa14.82□□□□□ -0.04
ZNF440-205ENST00000587795 RAPGEF2Q9Y4G8 1499 aa14.82□□□□□ -0.04
ZNF440-205ENST00000587795 ZBTB47Q9UFB7 747 aaPredicted RBP14.81□□□□□ -0.04
ZNF440-205ENST00000587795 AKT1S1Q96B36 256 aa14.79□□□□□ -0.04
ZNF440-205ENST00000587795 KIF21BO75037 1637 aa14.79□□□□□ -0.04
ZNF440-205ENST00000587795 SPDYE1Q8NFV5 336 aaPredicted RBP14.76□□□□□ -0.05
ZNF440-205ENST00000587795 SHROOM2Q13796 1616 aa14.76□□□□□ -0.05
ZNF440-205ENST00000587795 CTTNBP2Q8WZ74 1663 aa14.75□□□□□ -0.05
ZNF440-205ENST00000587795 CIZ1Q9ULV3 898 aaPredicted RBP14.75□□□□□ -0.05
ZNF440-205ENST00000587795 KIAA0586Q9BVV6 1533 aa14.73□□□□□ -0.05
ZNF440-205ENST00000587795 CLEC11AQ9Y240 323 aa14.71□□□□□ -0.05
ZNF440-205ENST00000587795 IQGAP2Q13576 1575 aa14.7□□□□□ -0.06
ZNF440-205ENST00000587795 RGL2O15211 777 aa14.7□□□□□ -0.06
ZNF440-205ENST00000587795 FAM9AQ8IZU1 332 aaPredicted RBP14.69□□□□□ -0.06
ZNF440-205ENST00000587795 ARHGEF11O15085 1522 aa14.68□□□□□ -0.06
ZNF440-205ENST00000587795 REM2Q8IYK8 340 aaPredicted RBP14.68□□□□□ -0.06
ZNF440-205ENST00000587795 RIMBP3CA6NJZ7 1639 aa14.67□□□□□ -0.06
ZNF440-205ENST00000587795 RIMBP3BA6NNM3 1639 aa14.67□□□□□ -0.06
ZNF440-205ENST00000587795 RIMBP3Q9UFD9 1639 aa14.67□□□□□ -0.06
ZNF440-205ENST00000587795 GOLGA3Q08378 1498 aa14.66□□□□□ -0.06
ZNF440-205ENST00000587795 PRR29P0C7W0 189 aa14.65□□□□□ -0.06
ZNF440-205ENST00000587795 HAP1P54257 671 aaPredicted RBP14.65□□□□□ -0.06
ZNF440-205ENST00000587795 NPM1P06748 294 aaKnown RBP eCLIP14.64□□□□□ -0.07
ZNF440-205ENST00000587795 UGGT2Q9NYU1 1516 aa14.64□□□□□ -0.07
ZNF440-205ENST00000587795 BBXQ8WY36 941 aaPredicted RBP14.61□□□□□ -0.07
ZNF440-205ENST00000587795 JPH4Q96JJ6 628 aa14.61□□□□□ -0.07
ZNF440-205ENST00000587795 ERCC6L2Q5T890 1561 aa14.6□□□□□ -0.07
ZNF440-205ENST00000587795 PRG4Q92954 1404 aaPredicted RBP14.6□□□□□ -0.07
ZNF440-205ENST00000587795 CREBZFQ9NS37 354 aa14.58□□□□□ -0.07
ZNF440-205ENST00000587795 NUBP1P53384 320 aa14.58□□□□□ -0.08
ZNF440-205ENST00000587795 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.58□□□□□ -0.08
ZNF440-205ENST00000587795 ARAP1Q96P48 1450 aa14.57□□□□□ -0.08
ZNF440-205ENST00000587795 KIAA0556O60303 1618 aa14.57□□□□□ -0.08
ZNF440-205ENST00000587795 DISP1Q96F81 1524 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms