RNA–Protein interactions for RNA: ENST00000585505.1

NBR1-203, Transcript of NBR1, autophagy cargo receptor, humanhuman

TSL 2

Gene NBR1, Length 3,295 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBR1-203ENST00000585505 ABCC8Q09428 1581 aa12.46□□□□□ -0.41
NBR1-203ENST00000585505 PDE4CQ08493 712 aa12.46□□□□□ -0.42
NBR1-203ENST00000585505 WRNQ14191 1432 aaPredicted RBP eCLIP12.46□□□□□ -0.42
NBR1-203ENST00000585505 BIVM-ERCC5R4GMW8 1640 aa12.45□□□□□ -0.42
NBR1-203ENST00000585505 SYNJ1O43426 1573 aa12.42□□□□□ -0.42
NBR1-203ENST00000585505 SAMD1Q6SPF0 538 aaPredicted RBP12.39□□□□□ -0.43
NBR1-203ENST00000585505 TOP2BQ02880 1626 aa12.38□□□□□ -0.43
NBR1-203ENST00000585505 LAMC3Q9Y6N6 1575 aa12.37□□□□□ -0.43
NBR1-203ENST00000585505 CLSPNQ9HAW4 1339 aa12.37□□□□□ -0.43
NBR1-203ENST00000585505 KCNH8Q96L42 1107 aa12.36□□□□□ -0.43
NBR1-203ENST00000585505 SOGA1O94964 1423 aa12.36□□□□□ -0.43
NBR1-203ENST00000585505 DNAJC5BQ9UF47 199 aa12.35□□□□□ -0.43
NBR1-203ENST00000585505 TNIKQ9UKE5 1360 aa12.33□□□□□ -0.44
NBR1-203ENST00000585505 KIF21AQ7Z4S6 1674 aa12.33□□□□□ -0.44
NBR1-203ENST00000585505 PPP6R1Q9UPN7 881 aa12.33□□□□□ -0.44
NBR1-203ENST00000585505 CADPSQ9ULU8 1353 aa12.33□□□□□ -0.44
NBR1-203ENST00000585505 CUX1P39880 1505 aa12.32□□□□□ -0.44
NBR1-203ENST00000585505 FKBP8Q14318 412 aa12.31□□□□□ -0.44
NBR1-203ENST00000585505 PKNOX2Q96KN3 472 aa12.31□□□□□ -0.44
NBR1-203ENST00000585505 NESP48681 1621 aa12.3□□□□□ -0.44
NBR1-203ENST00000585505 RUSC2Q8N2Y8 1516 aa12.3□□□□□ -0.44
NBR1-203ENST00000585505 KDM2AQ9Y2K7 1162 aa12.29□□□□□ -0.44
NBR1-203ENST00000585505 ITGAEP38570 1179 aa12.28□□□□□ -0.44
NBR1-203ENST00000585505 RBM19Q9Y4C8 960 aaKnown RBP12.28□□□□□ -0.44
NBR1-203ENST00000585505 WDR97A6NE52 1622 aa12.25□□□□□ -0.45
NBR1-203ENST00000585505 BCL11BQ9C0K0 894 aaPredicted RBP12.25□□□□□ -0.45
NBR1-203ENST00000585505 FBLN2P98095 1184 aa12.24□□□□□ -0.45
NBR1-203ENST00000585505 NEFLP07196 543 aa12.23□□□□□ -0.45
NBR1-203ENST00000585505 FANCD2Q9BXW9 1451 aa12.22□□□□□ -0.45
NBR1-203ENST00000585505 IGSF3O75054 1194 aa12.22□□□□□ -0.45
NBR1-203ENST00000585505 DNMBPQ6XZF7 1577 aa12.21□□□□□ -0.45
NBR1-203ENST00000585505 MSH5O43196 834 aa12.21□□□□□ -0.45
NBR1-203ENST00000585505 CDK11BP21127 795 aaKnown RBP12.21□□□□□ -0.45
NBR1-203ENST00000585505 CDK11AQ9UQ88 783 aaPredicted RBP12.21□□□□□ -0.45
NBR1-203ENST00000585505 BRD2P25440 801 aaKnown RBP12.2□□□□□ -0.46
NBR1-203ENST00000585505 ZBTB22O15209 634 aa12.19□□□□□ -0.46
NBR1-203ENST00000585505 TAF7LQ5H9L4 462 aa12.19□□□□□ -0.46
NBR1-203ENST00000585505 DHX57Q6P158 1386 aaKnown RBP12.18□□□□□ -0.46
NBR1-203ENST00000585505 GOLGA3Q08378 1498 aa12.18□□□□□ -0.46
NBR1-203ENST00000585505 CNKSR2Q8WXI2 1034 aa12.17□□□□□ -0.46
NBR1-203ENST00000585505 URB2Q14146 1524 aaKnown RBP12.17□□□□□ -0.46
NBR1-203ENST00000585505 CFAP44Q96MT7 982 aa12.16□□□□□ -0.46
NBR1-203ENST00000585505 TOPBP1Q92547 1522 aa12.14□□□□□ -0.47
NBR1-203ENST00000585505 THOC2Q8NI27 1593 aaKnown RBP12.14□□□□□ -0.47
NBR1-203ENST00000585505 CLIP1P30622 1438 aa12.14□□□□□ -0.47
NBR1-203ENST00000585505 VSIG10Q8N0Z9 540 aa12.13□□□□□ -0.47
NBR1-203ENST00000585505 TRIM52Q96A61 297 aa12.13□□□□□ -0.47
NBR1-203ENST00000585505 CEP164Q9UPV0 1460 aa12.13□□□□□ -0.47
NBR1-203ENST00000585505 ANO8Q9HCE9 1232 aaPredicted RBP12.12□□□□□ -0.47
NBR1-203ENST00000585505 KIF21BO75037 1637 aa12.12□□□□□ -0.47
NBR1-203ENST00000585505 TARBP1Q13395 1621 aaKnown RBP12.11□□□□□ -0.47
NBR1-203ENST00000585505 DDX10Q13206 875 aaKnown RBP12.11□□□□□ -0.47
NBR1-203ENST00000585505 WDR62O43379 1518 aa12.1□□□□□ -0.47
NBR1-203ENST00000585505 FGD5Q6ZNL6 1462 aa12.1□□□□□ -0.47
NBR1-203ENST00000585505 EEA1Q15075 1411 aa12.09□□□□□ -0.47
NBR1-203ENST00000585505 VPS8Q8N3P4 1428 aa12.09□□□□□ -0.47
NBR1-203ENST00000585505 PDS5BQ9NTI5 1447 aa12.08□□□□□ -0.48
NBR1-203ENST00000585505 ABCA5Q8WWZ7 1642 aa12.08□□□□□ -0.48
NBR1-203ENST00000585505 POLA1P09884 1462 aaPredicted RBP12.07□□□□□ -0.48
NBR1-203ENST00000585505 IRX6P78412 446 aaPredicted RBP12.07□□□□□ -0.48
NBR1-203ENST00000585505 CCDC136Q96JN2 1154 aa12.06□□□□□ -0.48
NBR1-203ENST00000585505 HIRIP3Q9BW71 556 aaPredicted RBP12.06□□□□□ -0.48
NBR1-203ENST00000585505 ABCA10Q8WWZ4 1543 aa12.05□□□□□ -0.48
NBR1-203ENST00000585505 FGD1P98174 961 aa12.03□□□□□ -0.48
NBR1-203ENST00000585505 MRC2Q9UBG0 1479 aa12.03□□□□□ -0.48
NBR1-203ENST00000585505 KANK4Q5T7N3 995 aaPredicted RBP12.03□□□□□ -0.48
NBR1-203ENST00000585505 ADRA2BP18089 450 aa12.02□□□□□ -0.49
NBR1-203ENST00000585505 PBRM1Q86U86 1689 aa12.01□□□□□ -0.49
NBR1-203ENST00000585505 CUX2O14529 1486 aa12□□□□□ -0.49
NBR1-203ENST00000585505 PRXQ9BXM0 1461 aa12□□□□□ -0.49
NBR1-203ENST00000585505 ERICH3Q5RHP9 1530 aa12□□□□□ -0.49
NBR1-203ENST00000585505 DEKP35659 375 aaKnown RBP12□□□□□ -0.49
NBR1-203ENST00000585505 RAD54L2Q9Y4B4 1467 aa11.98□□□□□ -0.49
NBR1-203ENST00000585505 RAPGEF2Q9Y4G8 1499 aa11.98□□□□□ -0.49
NBR1-203ENST00000585505 POLR3GLQ9BT43 218 aa11.98□□□□□ -0.49
NBR1-203ENST00000585505 FANCIQ9NVI1 1328 aa11.96□□□□□ -0.5
NBR1-203ENST00000585505 CUL7Q14999 1698 aa11.96□□□□□ -0.5
NBR1-203ENST00000585505 SIN3AQ96ST3 1273 aa11.96□□□□□ -0.5
NBR1-203ENST00000585505 NBR1Q14596 966 aa11.94□□□□□ -0.5
NBR1-203ENST00000585505 KIF27Q86VH2 1401 aa11.93□□□□□ -0.5
NBR1-203ENST00000585505 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.93□□□□□ -0.5
NBR1-203ENST00000585505 ANP32CO43423 234 aa11.92□□□□□ -0.5
NBR1-203ENST00000585505 PPP1R15AO75807 674 aaPredicted RBP11.92□□□□□ -0.5
NBR1-203ENST00000585505 CTTNBP2Q8WZ74 1663 aa11.9□□□□□ -0.5
NBR1-203ENST00000585505 IGF1RP08069 1367 aa11.9□□□□□ -0.5
NBR1-203ENST00000585505 PAXIP1Q6ZW49 1069 aaPredicted RBP11.9□□□□□ -0.5
NBR1-203ENST00000585505 EIF4G3O43432 1585 aaKnown RBP11.89□□□□□ -0.51
NBR1-203ENST00000585505 HSP90B1P14625 803 aaKnown RBP11.89□□□□□ -0.51
NBR1-203ENST00000585505 RAB3GAP2Q9H2M9 1393 aa11.89□□□□□ -0.51
NBR1-203ENST00000585505 HNRNPUQ00839 825 aaKnown RBP eCLIP11.89□□□□□ -0.51
NBR1-203ENST00000585505 MAPKBP1O60336 1514 aa11.87□□□□□ -0.51
NBR1-203ENST00000585505 A0A0U1RQG5 324 aaPredicted RBP11.87□□□□□ -0.51
NBR1-203ENST00000585505 IFT140Q96RY7 1462 aa11.86□□□□□ -0.51
NBR1-203ENST00000585505 ADAMTS12P58397 1594 aa11.86□□□□□ -0.51
NBR1-203ENST00000585505 CCNB3Q8WWL7 1395 aa11.86□□□□□ -0.51
NBR1-203ENST00000585505 CCER2I3L3R5 266 aa11.86□□□□□ -0.51
NBR1-203ENST00000585505 ARAP1Q96P48 1450 aa11.85□□□□□ -0.51
NBR1-203ENST00000585505 RRBP1Q9P2E9 1410 aaKnown RBP11.84□□□□□ -0.51
NBR1-203ENST00000585505 ARID3AQ99856 593 aa11.84□□□□□ -0.51
NBR1-203ENST00000585505 SALL2Q9Y467 1007 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms