RNA–Protein interactions for RNA: ENST00000584506.1

CDH8-212, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-212ENST00000584506 FAM9AQ8IZU1 332 aaPredicted RBP10.92□□□□□ -0.66
CDH8-212ENST00000584506 URB2Q14146 1524 aaKnown RBP10.91□□□□□ -0.66
CDH8-212ENST00000584506 ERCC6Q03468 1493 aa10.91□□□□□ -0.66
CDH8-212ENST00000584506 FGD5Q6ZNL6 1462 aa10.91□□□□□ -0.66
CDH8-212ENST00000584506 MRC2Q9UBG0 1479 aa10.91□□□□□ -0.66
CDH8-212ENST00000584506 SOGA1O94964 1423 aa10.89□□□□□ -0.67
CDH8-212ENST00000584506 POTEHQ6S545 545 aa10.87□□□□□ -0.67
CDH8-212ENST00000584506 POLA1P09884 1462 aaPredicted RBP10.86□□□□□ -0.67
CDH8-212ENST00000584506 KIF27Q86VH2 1401 aa10.85□□□□□ -0.67
CDH8-212ENST00000584506 RUSC2Q8N2Y8 1516 aa10.85□□□□□ -0.67
CDH8-212ENST00000584506 WDR62O43379 1518 aa10.84□□□□□ -0.67
CDH8-212ENST00000584506 THOC2Q8NI27 1593 aaKnown RBP10.83□□□□□ -0.68
CDH8-212ENST00000584506 LOC105371045A0A1W2PR82 267 aa10.83□□□□□ -0.68
CDH8-212ENST00000584506 CUX2O14529 1486 aa10.82□□□□□ -0.68
CDH8-212ENST00000584506 ABCA10Q8WWZ4 1543 aa10.82□□□□□ -0.68
CDH8-212ENST00000584506 WDR97A6NE52 1622 aa10.81□□□□□ -0.68
CDH8-212ENST00000584506 RAD54L2Q9Y4B4 1467 aa10.81□□□□□ -0.68
CDH8-212ENST00000584506 KIF21BO75037 1637 aa10.8□□□□□ -0.68
CDH8-212ENST00000584506 TARBP1Q13395 1621 aaKnown RBP10.79□□□□□ -0.68
CDH8-212ENST00000584506 IFT140Q96RY7 1462 aa10.77□□□□□ -0.69
CDH8-212ENST00000584506 GOLGA3Q08378 1498 aa10.76□□□□□ -0.69
CDH8-212ENST00000584506 ABCA5Q8WWZ7 1642 aa10.75□□□□□ -0.69
CDH8-212ENST00000584506 ERICH3Q5RHP9 1530 aa10.74□□□□□ -0.69
CDH8-212ENST00000584506 CUL7Q14999 1698 aa10.74□□□□□ -0.69
CDH8-212ENST00000584506 AKT1S1Q96B36 256 aa10.74□□□□□ -0.69
CDH8-212ENST00000584506 IGF1RP08069 1367 aa10.73□□□□□ -0.69
CDH8-212ENST00000584506 GAPVD1Q14C86 1478 aa10.73□□□□□ -0.69
CDH8-212ENST00000584506 PRXQ9BXM0 1461 aa10.73□□□□□ -0.69
CDH8-212ENST00000584506 UBTFP17480 764 aaKnown RBP10.72□□□□□ -0.69
CDH8-212ENST00000584506 OSCARQ8IYS5 282 aa10.72□□□□□ -0.69
CDH8-212ENST00000584506 TDRD9Q8NDG6 1382 aaKnown RBP10.72□□□□□ -0.69
CDH8-212ENST00000584506 PBRM1Q86U86 1689 aa10.72□□□□□ -0.69
CDH8-212ENST00000584506 TNIKQ9UKE5 1360 aa10.71□□□□□ -0.69
CDH8-212ENST00000584506 CARMIL1Q5VZK9 1371 aa10.7□□□□□ -0.7
CDH8-212ENST00000584506 RAPGEF2Q9Y4G8 1499 aa10.69□□□□□ -0.7
CDH8-212ENST00000584506 FBLN2P98095 1184 aa10.69□□□□□ -0.7
CDH8-212ENST00000584506 CHRDL2Q6WN34 429 aa10.69□□□□□ -0.7
CDH8-212ENST00000584506 GRIN2BQ13224 1484 aa10.67□□□□□ -0.7
CDH8-212ENST00000584506 EIF4G3O43432 1585 aaKnown RBP10.66□□□□□ -0.7
CDH8-212ENST00000584506 MKRN4PQ13434 485 aaPredicted RBP10.66□□□□□ -0.7
CDH8-212ENST00000584506 AQRO60306 1485 aaKnown RBP eCLIP10.66□□□□□ -0.7
CDH8-212ENST00000584506 ZNF608Q9ULD9 1512 aaPredicted RBP10.65□□□□□ -0.7
CDH8-212ENST00000584506 FHAD1B1AJZ9 1412 aa10.62□□□□□ -0.71
CDH8-212ENST00000584506 CEP162Q5TB80 1403 aa10.62□□□□□ -0.71
CDH8-212ENST00000584506 CTTNBP2Q8WZ74 1663 aa10.62□□□□□ -0.71
CDH8-212ENST00000584506 ADAMTS12P58397 1594 aa10.6□□□□□ -0.71
CDH8-212ENST00000584506 REM2Q8IYK8 340 aaPredicted RBP10.6□□□□□ -0.71
CDH8-212ENST00000584506 MAGI1Q96QZ7 1491 aaPredicted RBP10.6□□□□□ -0.71
CDH8-212ENST00000584506 SPDYE2BA6NHP3 402 aa10.59□□□□□ -0.71
CDH8-212ENST00000584506 SPDYE6P0CI01 402 aa10.59□□□□□ -0.71
CDH8-212ENST00000584506 SPDYE2Q495Y8 402 aa10.59□□□□□ -0.71
CDH8-212ENST00000584506 CLIP1P30622 1438 aa10.58□□□□□ -0.72
CDH8-212ENST00000584506 SNAPC4Q5SXM2 1469 aa10.57□□□□□ -0.72
CDH8-212ENST00000584506 SYNJ2O15056 1496 aa10.55□□□□□ -0.72
CDH8-212ENST00000584506 CHMP7Q8WUX9 453 aaPredicted RBP10.53□□□□□ -0.72
CDH8-212ENST00000584506 RANGAP1P46060 587 aaPredicted RBP10.52□□□□□ -0.73
CDH8-212ENST00000584506 GRIN2AQ12879 1464 aa10.52□□□□□ -0.73
CDH8-212ENST00000584506 EFCAB5A4FU69 1503 aa10.5□□□□□ -0.73
CDH8-212ENST00000584506 IQGAP2Q13576 1575 aa10.49□□□□□ -0.73
CDH8-212ENST00000584506 CHD1O14646 1710 aa10.49□□□□□ -0.73
CDH8-212ENST00000584506 PITPNM1O00562 1244 aa10.48□□□□□ -0.73
CDH8-212ENST00000584506 ARHGAP35Q9NRY4 1499 aa10.48□□□□□ -0.73
CDH8-212ENST00000584506 KIAA0586Q9BVV6 1533 aa10.48□□□□□ -0.73
CDH8-212ENST00000584506 VPS8Q8N3P4 1428 aa10.47□□□□□ -0.73
CDH8-212ENST00000584506 ZNF692Q9BU19 519 aaPredicted RBP10.45□□□□□ -0.74
CDH8-212ENST00000584506 SAMD9Q5K651 1589 aa10.44□□□□□ -0.74
CDH8-212ENST00000584506 CEP170Q5SW79 1584 aa10.44□□□□□ -0.74
CDH8-212ENST00000584506 ARAP1Q96P48 1450 aa10.44□□□□□ -0.74
CDH8-212ENST00000584506 NUP160Q12769 1436 aa10.44□□□□□ -0.74
CDH8-212ENST00000584506 UGGT2Q9NYU1 1516 aa10.43□□□□□ -0.74
CDH8-212ENST00000584506 PIP4P2Q8N4L2 257 aa10.42□□□□□ -0.74
CDH8-212ENST00000584506 SSUH2Q9Y2M2 353 aa10.42□□□□□ -0.74
CDH8-212ENST00000584506 P3H3Q8IVL6 736 aa10.4□□□□□ -0.74
CDH8-212ENST00000584506 FMN1Q68DA7 1419 aa10.4□□□□□ -0.75
CDH8-212ENST00000584506 SPDYE1Q8NFV5 336 aaPredicted RBP10.39□□□□□ -0.75
CDH8-212ENST00000584506 FXR2P51116 673 aaKnown RBP eCLIP10.38□□□□□ -0.75
CDH8-212ENST00000584506 JPH4Q96JJ6 628 aa10.38□□□□□ -0.75
CDH8-212ENST00000584506 FHOD3Q2V2M9 1422 aa10.38□□□□□ -0.75
CDH8-212ENST00000584506 CARMIL2Q6F5E8 1435 aa10.38□□□□□ -0.75
CDH8-212ENST00000584506 KIAA0556O60303 1618 aa10.37□□□□□ -0.75
CDH8-212ENST00000584506 DISP1Q96F81 1524 aa10.35□□□□□ -0.75
CDH8-212ENST00000584506 FYCO1Q9BQS8 1478 aa10.35□□□□□ -0.75
CDH8-212ENST00000584506 MAP3K1Q13233 1512 aa10.34□□□□□ -0.75
CDH8-212ENST00000584506 SHROOM2Q13796 1616 aa10.34□□□□□ -0.75
CDH8-212ENST00000584506 PCF11O94913 1555 aaKnown RBP10.34□□□□□ -0.75
CDH8-212ENST00000584506 CASKIN1Q8WXD9 1431 aa10.33□□□□□ -0.76
CDH8-212ENST00000584506 TRIM26Q12899 539 aaPredicted RBP10.33□□□□□ -0.76
CDH8-212ENST00000584506 CLEC11AQ9Y240 323 aa10.33□□□□□ -0.76
CDH8-212ENST00000584506 CLASP1Q7Z460 1538 aa10.33□□□□□ -0.76
CDH8-212ENST00000584506 ATP1B4Q9UN42 357 aaPredicted RBP10.32□□□□□ -0.76
CDH8-212ENST00000584506 PPARGC1BQ86YN6 1023 aaKnown RBP10.31□□□□□ -0.76
CDH8-212ENST00000584506 HECW1Q76N89 1606 aa10.31□□□□□ -0.76
CDH8-212ENST00000584506 PRG4Q92954 1404 aaPredicted RBP10.31□□□□□ -0.76
CDH8-212ENST00000584506 CFAP43Q8NDM7 1665 aa10.31□□□□□ -0.76
CDH8-212ENST00000584506 TIAM1Q13009 1591 aa10.31□□□□□ -0.76
CDH8-212ENST00000584506 RAPGEF6Q8TEU7 1601 aa10.29□□□□□ -0.76
CDH8-212ENST00000584506 LRRIQ1Q96JM4 1722 aa10.27□□□□□ -0.76
CDH8-212ENST00000584506 SPDYE4A6NLX3 237 aa10.27□□□□□ -0.77
CDH8-212ENST00000584506 CCDC18Q5T9S5 1454 aa10.27□□□□□ -0.77
CDH8-212ENST00000584506 TTBK1Q5TCY1 1321 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms