RNA–Protein interactions for RNA: ENST00000584387.1

ARHGAP28-215, Transcript of Rho GTPase activating protein 28, humanhuman

TSL 5

Gene ARHGAP28, Length 443 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP28-215ENST00000584387 FANCD2Q9BXW9 1451 aa11.22□□□□□ -0.61
ARHGAP28-215ENST00000584387 RIMBP3CA6NJZ7 1639 aa11.2□□□□□ -0.62
ARHGAP28-215ENST00000584387 RIMBP3BA6NNM3 1639 aa11.2□□□□□ -0.62
ARHGAP28-215ENST00000584387 RIMBP3Q9UFD9 1639 aa11.2□□□□□ -0.62
ARHGAP28-215ENST00000584387 URB2Q14146 1524 aaKnown RBP11.19□□□□□ -0.62
ARHGAP28-215ENST00000584387 CFTRP13569 1480 aa11.16□□□□□ -0.62
ARHGAP28-215ENST00000584387 ZNF608Q9ULD9 1512 aaPredicted RBP11.13□□□□□ -0.63
ARHGAP28-215ENST00000584387 SPDYE4A6NLX3 237 aa11.1□□□□□ -0.63
ARHGAP28-215ENST00000584387 CHRDL2Q6WN34 429 aa11.1□□□□□ -0.63
ARHGAP28-215ENST00000584387 ARHGEF11O15085 1522 aa11.09□□□□□ -0.63
ARHGAP28-215ENST00000584387 PITPNM1O00562 1244 aa11.09□□□□□ -0.63
ARHGAP28-215ENST00000584387 PRDM2Q13029 1718 aa11.07□□□□□ -0.64
ARHGAP28-215ENST00000584387 RSF1Q96T23 1441 aaPredicted RBP11.06□□□□□ -0.64
ARHGAP28-215ENST00000584387 TOP2AP11388 1531 aaKnown RBP11.05□□□□□ -0.64
ARHGAP28-215ENST00000584387 CYB5RLQ6IPT4 315 aa11.05□□□□□ -0.64
ARHGAP28-215ENST00000584387 CHD1O14646 1710 aa11.04□□□□□ -0.64
ARHGAP28-215ENST00000584387 POTEHQ6S545 545 aa11.02□□□□□ -0.65
ARHGAP28-215ENST00000584387 IFT140Q96RY7 1462 aa11□□□□□ -0.65
ARHGAP28-215ENST00000584387 EIF4G3O43432 1585 aaKnown RBP11□□□□□ -0.65
ARHGAP28-215ENST00000584387 SPDYE1Q8NFV5 336 aaPredicted RBP11□□□□□ -0.65
ARHGAP28-215ENST00000584387 ARAP1Q96P48 1450 aa11□□□□□ -0.65
ARHGAP28-215ENST00000584387 TOPBP1Q92547 1522 aa10.99□□□□□ -0.65
ARHGAP28-215ENST00000584387 PROM2Q8N271 834 aa10.98□□□□□ -0.65
ARHGAP28-215ENST00000584387 CCDC88BA6NC98 1476 aa10.98□□□□□ -0.65
ARHGAP28-215ENST00000584387 AQRO60306 1485 aaKnown RBP eCLIP10.97□□□□□ -0.65
ARHGAP28-215ENST00000584387 TARBP1Q13395 1621 aaKnown RBP10.96□□□□□ -0.65
ARHGAP28-215ENST00000584387 FXR2P51116 673 aaKnown RBP eCLIP10.96□□□□□ -0.65
ARHGAP28-215ENST00000584387 PIP4P2Q8N4L2 257 aa10.94□□□□□ -0.66
ARHGAP28-215ENST00000584387 CLEC11AQ9Y240 323 aa10.94□□□□□ -0.66
ARHGAP28-215ENST00000584387 DNMBPQ6XZF7 1577 aa10.9□□□□□ -0.66
ARHGAP28-215ENST00000584387 RAD54L2Q9Y4B4 1467 aa10.88□□□□□ -0.67
ARHGAP28-215ENST00000584387 FKBP8Q14318 412 aa10.88□□□□□ -0.67
ARHGAP28-215ENST00000584387 POLA1P09884 1462 aaPredicted RBP10.87□□□□□ -0.67
ARHGAP28-215ENST00000584387 ABCC8Q09428 1581 aa10.86□□□□□ -0.67
ARHGAP28-215ENST00000584387 TDRD9Q8NDG6 1382 aaKnown RBP10.85□□□□□ -0.67
ARHGAP28-215ENST00000584387 CLASP1Q7Z460 1538 aa10.84□□□□□ -0.67
ARHGAP28-215ENST00000584387 PRR29P0C7W0 189 aa10.84□□□□□ -0.67
ARHGAP28-215ENST00000584387 STAG3Q9UJ98 1225 aa10.82□□□□□ -0.68
ARHGAP28-215ENST00000584387 SNAPC4Q5SXM2 1469 aa10.81□□□□□ -0.68
ARHGAP28-215ENST00000584387 SOGA1O94964 1423 aa10.8□□□□□ -0.68
ARHGAP28-215ENST00000584387 PRKAR2AP13861 404 aaKnown RBP10.78□□□□□ -0.68
ARHGAP28-215ENST00000584387 FGD5Q6ZNL6 1462 aa10.76□□□□□ -0.69
ARHGAP28-215ENST00000584387 SYNJ1O43426 1573 aa10.75□□□□□ -0.69
ARHGAP28-215ENST00000584387 ERCC6L2Q5T890 1561 aa10.75□□□□□ -0.69
ARHGAP28-215ENST00000584387 CHADLQ6NUI6 762 aa10.75□□□□□ -0.69
ARHGAP28-215ENST00000584387 CHMP7Q8WUX9 453 aaPredicted RBP10.75□□□□□ -0.69
ARHGAP28-215ENST00000584387 WDR97A6NE52 1622 aa10.74□□□□□ -0.69
ARHGAP28-215ENST00000584387 CUX1P39880 1505 aa10.74□□□□□ -0.69
ARHGAP28-215ENST00000584387 PBRM1Q86U86 1689 aa10.73□□□□□ -0.69
ARHGAP28-215ENST00000584387 CREBZFQ9NS37 354 aa10.72□□□□□ -0.69
ARHGAP28-215ENST00000584387 GAPVD1Q14C86 1478 aa10.72□□□□□ -0.69
ARHGAP28-215ENST00000584387 MAGI1Q96QZ7 1491 aaPredicted RBP10.71□□□□□ -0.69
ARHGAP28-215ENST00000584387 GRIN2BQ13224 1484 aa10.7□□□□□ -0.7
ARHGAP28-215ENST00000584387 SYNJ2O15056 1496 aa10.69□□□□□ -0.7
ARHGAP28-215ENST00000584387 KIF13AQ9H1H9 1805 aa10.68□□□□□ -0.7
ARHGAP28-215ENST00000584387 FARP1Q9Y4F1 1045 aaPredicted RBP10.64□□□□□ -0.71
ARHGAP28-215ENST00000584387 ABCA5Q8WWZ7 1642 aa10.64□□□□□ -0.71
ARHGAP28-215ENST00000584387 MNX1P50219 401 aaPredicted RBP10.63□□□□□ -0.71
ARHGAP28-215ENST00000584387 CEP170Q5SW79 1584 aa10.62□□□□□ -0.71
ARHGAP28-215ENST00000584387 EVX2Q03828 476 aa10.62□□□□□ -0.71
ARHGAP28-215ENST00000584387 HAX1O00165 279 aa10.6□□□□□ -0.71
ARHGAP28-215ENST00000584387 ABCA10Q8WWZ4 1543 aa10.59□□□□□ -0.71
ARHGAP28-215ENST00000584387 C19orf67A6NJJ6 358 aa10.59□□□□□ -0.71
ARHGAP28-215ENST00000584387 GRIN2AQ12879 1464 aa10.59□□□□□ -0.71
ARHGAP28-215ENST00000584387 SHROOM2Q13796 1616 aa10.58□□□□□ -0.72
ARHGAP28-215ENST00000584387 NUP160Q12769 1436 aa10.57□□□□□ -0.72
ARHGAP28-215ENST00000584387 ADAMTS12P58397 1594 aa10.56□□□□□ -0.72
ARHGAP28-215ENST00000584387 MIER1Q8N108 512 aa10.54□□□□□ -0.72
ARHGAP28-215ENST00000584387 FBXO3Q9UK99 471 aa10.54□□□□□ -0.72
ARHGAP28-215ENST00000584387 KDM4FA0A1W2PPD8 638 aa10.52□□□□□ -0.73
ARHGAP28-215ENST00000584387 TSPOAP1O95153 1857 aa10.51□□□□□ -0.73
ARHGAP28-215ENST00000584387 PRG4Q92954 1404 aaPredicted RBP10.49□□□□□ -0.73
ARHGAP28-215ENST00000584387 BIVM-ERCC5R4GMW8 1640 aa10.48□□□□□ -0.73
ARHGAP28-215ENST00000584387 FAM69CQ0P6D2 419 aa10.48□□□□□ -0.73
ARHGAP28-215ENST00000584387 SP7Q8TDD2 431 aaPredicted RBP10.48□□□□□ -0.73
ARHGAP28-215ENST00000584387 FHAD1B1AJZ9 1412 aa10.48□□□□□ -0.73
ARHGAP28-215ENST00000584387 JPH4Q96JJ6 628 aa10.47□□□□□ -0.73
ARHGAP28-215ENST00000584387 ABCC10Q5T3U5 1492 aa10.47□□□□□ -0.73
ARHGAP28-215ENST00000584387 DIP2BQ9P265 1576 aa10.47□□□□□ -0.73
ARHGAP28-215ENST00000584387 ILDR1Q86SU0 546 aaPredicted RBP10.46□□□□□ -0.73
ARHGAP28-215ENST00000584387 ADCY10Q96PN6 1610 aa10.46□□□□□ -0.74
ARHGAP28-215ENST00000584387 TOP2BQ02880 1626 aa10.45□□□□□ -0.74
ARHGAP28-215ENST00000584387 WRNQ14191 1432 aaPredicted RBP eCLIP10.45□□□□□ -0.74
ARHGAP28-215ENST00000584387 NPM1P06748 294 aaKnown RBP eCLIP10.45□□□□□ -0.74
ARHGAP28-215ENST00000584387 PLCD3Q8N3E9 789 aa10.45□□□□□ -0.74
ARHGAP28-215ENST00000584387 CD44P16070 742 aaKnown RBP10.44□□□□□ -0.74
ARHGAP28-215ENST00000584387 ERICH3Q5RHP9 1530 aa10.43□□□□□ -0.74
ARHGAP28-215ENST00000584387 VASPP50552 380 aaPredicted RBP10.43□□□□□ -0.74
ARHGAP28-215ENST00000584387 RUSC2Q8N2Y8 1516 aa10.43□□□□□ -0.74
ARHGAP28-215ENST00000584387 KDM6BO15054 1643 aa10.42□□□□□ -0.74
ARHGAP28-215ENST00000584387 MAPKBP1O60336 1514 aa10.41□□□□□ -0.74
ARHGAP28-215ENST00000584387 PLEKHG5O94827 1062 aa10.4□□□□□ -0.74
ARHGAP28-215ENST00000584387 SUPT5HO00267 1087 aaKnown RBP10.39□□□□□ -0.75
ARHGAP28-215ENST00000584387 PPRC1Q5VV67 1664 aaKnown RBP10.38□□□□□ -0.75
ARHGAP28-215ENST00000584387 NUBP1P53384 320 aa10.36□□□□□ -0.75
ARHGAP28-215ENST00000584387 ZRANB1Q9UGI0 708 aa10.35□□□□□ -0.75
ARHGAP28-215ENST00000584387 GABBR2O75899 941 aa10.34□□□□□ -0.75
ARHGAP28-215ENST00000584387 IFNLR1Q8IU57 520 aaPredicted RBP10.34□□□□□ -0.75
ARHGAP28-215ENST00000584387 RASEFQ8IZ41 740 aa10.34□□□□□ -0.75
ARHGAP28-215ENST00000584387 ZBTB47Q9UFB7 747 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms