RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 YTHDC1Q96MU7 727 aaKnown RBP17.44■□□□□ 0.38
CDK5RAP3-232ENST00000584168 KIF27Q86VH2 1401 aa17.44■□□□□ 0.38
CDK5RAP3-232ENST00000584168 SALL2Q9Y467 1007 aaPredicted RBP17.42■□□□□ 0.38
CDK5RAP3-232ENST00000584168 RAPGEF2Q9Y4G8 1499 aa17.4■□□□□ 0.38
CDK5RAP3-232ENST00000584168 ABCA5Q8WWZ7 1642 aa17.37■□□□□ 0.37
CDK5RAP3-232ENST00000584168 CLSPNQ9HAW4 1339 aa17.36■□□□□ 0.37
CDK5RAP3-232ENST00000584168 SUPT16HQ9Y5B9 1047 aaKnown RBP17.35■□□□□ 0.37
CDK5RAP3-232ENST00000584168 IGF1RP08069 1367 aa17.35■□□□□ 0.37
CDK5RAP3-232ENST00000584168 CCDC136Q96JN2 1154 aa17.34■□□□□ 0.37
CDK5RAP3-232ENST00000584168 GAPVD1Q14C86 1478 aa17.33■□□□□ 0.36
CDK5RAP3-232ENST00000584168 AQRO60306 1485 aaKnown RBP eCLIP17.31■□□□□ 0.369e-9■■■■□ 24.7
CDK5RAP3-232ENST00000584168 PKNOX2Q96KN3 472 aa17.31■□□□□ 0.36
CDK5RAP3-232ENST00000584168 ZNF608Q9ULD9 1512 aaPredicted RBP17.31■□□□□ 0.36
CDK5RAP3-232ENST00000584168 GOLGA3Q08378 1498 aa17.3■□□□□ 0.36
CDK5RAP3-232ENST00000584168 EIF4G3O43432 1585 aaKnown RBP17.29■□□□□ 0.36
CDK5RAP3-232ENST00000584168 ERICH3Q5RHP9 1530 aa17.29■□□□□ 0.36
CDK5RAP3-232ENST00000584168 PBRM1Q86U86 1689 aa17.28■□□□□ 0.36
CDK5RAP3-232ENST00000584168 ERICH6BQ5W0A0 696 aa17.27■□□□□ 0.36
CDK5RAP3-232ENST00000584168 CEP162Q5TB80 1403 aa17.27■□□□□ 0.36
CDK5RAP3-232ENST00000584168 CARMIL1Q5VZK9 1371 aa17.27■□□□□ 0.35
CDK5RAP3-232ENST00000584168 PODXL2Q9NZ53 605 aa17.26■□□□□ 0.35
CDK5RAP3-232ENST00000584168 KIF21BO75037 1637 aa17.26■□□□□ 0.35
CDK5RAP3-232ENST00000584168 GRIN2BQ13224 1484 aa17.25■□□□□ 0.35
CDK5RAP3-232ENST00000584168 TNIKQ9UKE5 1360 aa17.25■□□□□ 0.35
CDK5RAP3-232ENST00000584168 CUL7Q14999 1698 aa17.24■□□□□ 0.35
CDK5RAP3-232ENST00000584168 PRXQ9BXM0 1461 aa17.24■□□□□ 0.35
CDK5RAP3-232ENST00000584168 P3H3Q8IVL6 736 aa17.23■□□□□ 0.35
CDK5RAP3-232ENST00000584168 MYT1LQ9UL68 1186 aa17.22■□□□□ 0.35
CDK5RAP3-232ENST00000584168 FBLN2P98095 1184 aa17.2■□□□□ 0.34
CDK5RAP3-232ENST00000584168 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.18■□□□□ 0.34
CDK5RAP3-232ENST00000584168 ADAMTS12P58397 1594 aa17.16■□□□□ 0.34
CDK5RAP3-232ENST00000584168 SNAPC4Q5SXM2 1469 aa17.16■□□□□ 0.34
CDK5RAP3-232ENST00000584168 MAGI1Q96QZ7 1491 aaPredicted RBP17.16■□□□□ 0.34
CDK5RAP3-232ENST00000584168 DEKP35659 375 aaKnown RBP17.15■□□□□ 0.34
CDK5RAP3-232ENST00000584168 FHAD1B1AJZ9 1412 aa17.15■□□□□ 0.34
CDK5RAP3-232ENST00000584168 CCER1Q8TC90 406 aaPredicted RBP17.14■□□□□ 0.34
CDK5RAP3-232ENST00000584168 CLIP1P30622 1438 aa17.14■□□□□ 0.33
CDK5RAP3-232ENST00000584168 RBM19Q9Y4C8 960 aaKnown RBP17.08■□□□□ 0.32
CDK5RAP3-232ENST00000584168 SYNJ2O15056 1496 aa17.08■□□□□ 0.32
CDK5RAP3-232ENST00000584168 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.06■□□□□ 0.32
CDK5RAP3-232ENST00000584168 ATP1B4Q9UN42 357 aaPredicted RBP17.06■□□□□ 0.32
CDK5RAP3-232ENST00000584168 MSH5O43196 834 aa17.05■□□□□ 0.32
CDK5RAP3-232ENST00000584168 MIER1Q8N108 512 aa17.04■□□□□ 0.32
CDK5RAP3-232ENST00000584168 GRIN2AQ12879 1464 aa17.03■□□□□ 0.32
CDK5RAP3-232ENST00000584168 CHMP7Q8WUX9 453 aaPredicted RBP17.02■□□□□ 0.32
CDK5RAP3-232ENST00000584168 ZNF316A6NFI3 1004 aaPredicted RBP17■□□□□ 0.31
CDK5RAP3-232ENST00000584168 CTTNBP2Q8WZ74 1663 aa16.99■□□□□ 0.31
CDK5RAP3-232ENST00000584168 ARAP1Q96P48 1450 aa16.98■□□□□ 0.31
CDK5RAP3-232ENST00000584168 CHD1O14646 1710 aa16.97■□□□□ 0.31
CDK5RAP3-232ENST00000584168 ARID3CA6NKF2 412 aa16.96■□□□□ 0.31
CDK5RAP3-232ENST00000584168 ARHGAP35Q9NRY4 1499 aa16.96■□□□□ 0.31
CDK5RAP3-232ENST00000584168 NUP160Q12769 1436 aa16.93■□□□□ 0.3
CDK5RAP3-232ENST00000584168 FHOD3Q2V2M9 1422 aa16.93■□□□□ 0.3
CDK5RAP3-232ENST00000584168 CEP170Q5SW79 1584 aa16.93■□□□□ 0.3
CDK5RAP3-232ENST00000584168 KIAA0586Q9BVV6 1533 aa16.9■□□□□ 0.3
CDK5RAP3-232ENST00000584168 VPS8Q8N3P4 1428 aa16.9■□□□□ 0.3
CDK5RAP3-232ENST00000584168 IQGAP2Q13576 1575 aa16.9■□□□□ 0.3
CDK5RAP3-232ENST00000584168 KANK4Q5T7N3 995 aaPredicted RBP16.89■□□□□ 0.29
CDK5RAP3-232ENST00000584168 EFCAB5A4FU69 1503 aa16.83■□□□□ 0.29
CDK5RAP3-232ENST00000584168 FANCIQ9NVI1 1328 aa16.83■□□□□ 0.28
CDK5RAP3-232ENST00000584168 UGGT2Q9NYU1 1516 aa16.82■□□□□ 0.28
CDK5RAP3-232ENST00000584168 IL27Q8NEV9 243 aa16.81■□□□□ 0.28
CDK5RAP3-232ENST00000584168 SAMD9Q5K651 1589 aa16.8■□□□□ 0.28
CDK5RAP3-232ENST00000584168 CLASP1Q7Z460 1538 aa16.79■□□□□ 0.28
CDK5RAP3-232ENST00000584168 RTN4Q9NQC3 1192 aaKnown RBP16.78■□□□□ 0.28
CDK5RAP3-232ENST00000584168 NEFLP07196 543 aa16.77■□□□□ 0.27
CDK5RAP3-232ENST00000584168 JPH4Q96JJ6 628 aa16.76■□□□□ 0.27
CDK5RAP3-232ENST00000584168 BCANQ96GW7 911 aa16.75■□□□□ 0.27
CDK5RAP3-232ENST00000584168 SHROOM2Q13796 1616 aa16.75■□□□□ 0.27
CDK5RAP3-232ENST00000584168 OSCARQ8IYS5 282 aa16.74■□□□□ 0.27
CDK5RAP3-232ENST00000584168 DISP1Q96F81 1524 aa16.73■□□□□ 0.27
CDK5RAP3-232ENST00000584168 KIAA0556O60303 1618 aa16.73■□□□□ 0.27
CDK5RAP3-232ENST00000584168 HNRNPUL2Q1KMD3 747 aaKnown RBP16.72■□□□□ 0.27
CDK5RAP3-232ENST00000584168 CARMIL2Q6F5E8 1435 aa16.71■□□□□ 0.27
CDK5RAP3-232ENST00000584168 PRG4Q92954 1404 aaPredicted RBP16.68■□□□□ 0.26
CDK5RAP3-232ENST00000584168 ITGAEP38570 1179 aa16.68■□□□□ 0.26
CDK5RAP3-232ENST00000584168 PCF11O94913 1555 aaKnown RBP16.68■□□□□ 0.26
CDK5RAP3-232ENST00000584168 FMN1Q68DA7 1419 aa16.66■□□□□ 0.26
CDK5RAP3-232ENST00000584168 GLIPR1L2Q4G1C9 344 aa16.64■□□□□ 0.25
CDK5RAP3-232ENST00000584168 ZMYND15Q9H091 742 aa16.63■□□□□ 0.25
CDK5RAP3-232ENST00000584168 PDE4CQ08493 712 aa16.6■□□□□ 0.25
CDK5RAP3-232ENST00000584168 FKBP8Q14318 412 aa16.6■□□□□ 0.25
CDK5RAP3-232ENST00000584168 ERCC6L2Q5T890 1561 aa16.6■□□□□ 0.25
CDK5RAP3-232ENST00000584168 CASKIN1Q8WXD9 1431 aa16.59■□□□□ 0.25
CDK5RAP3-232ENST00000584168 FYCO1Q9BQS8 1478 aa16.58■□□□□ 0.25
CDK5RAP3-232ENST00000584168 PLB1Q6P1J6 1458 aa16.58■□□□□ 0.24
CDK5RAP3-232ENST00000584168 CDK13Q14004 1512 aaKnown RBP16.56■□□□□ 0.24
CDK5RAP3-232ENST00000584168 PTPRGP23470 1445 aa16.55■□□□□ 0.24
CDK5RAP3-232ENST00000584168 TIAM1Q13009 1591 aa16.55■□□□□ 0.24
CDK5RAP3-232ENST00000584168 NBR1Q14596 966 aa16.55■□□□□ 0.24
CDK5RAP3-232ENST00000584168 FAM50AQ14320 339 aaKnown RBP16.54■□□□□ 0.24
CDK5RAP3-232ENST00000584168 PDIA4P13667 645 aaKnown RBP16.53■□□□□ 0.24
CDK5RAP3-232ENST00000584168 HECW1Q76N89 1606 aa16.53■□□□□ 0.24
CDK5RAP3-232ENST00000584168 RAPGEF6Q8TEU7 1601 aa16.53■□□□□ 0.24
CDK5RAP3-232ENST00000584168 MTUS2Q5JR59 1369 aa16.53■□□□□ 0.24
CDK5RAP3-232ENST00000584168 LRRC9Q6ZRR7 1453 aa16.53■□□□□ 0.24
CDK5RAP3-232ENST00000584168 PHLDB1Q86UU1 1377 aa16.53■□□□□ 0.24
CDK5RAP3-232ENST00000584168 VSIG10Q8N0Z9 540 aa16.53■□□□□ 0.24
CDK5RAP3-232ENST00000584168 LRRIQ1Q96JM4 1722 aa16.52■□□□□ 0.23
CDK5RAP3-232ENST00000584168 FGD1P98174 961 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms