RNA–Protein interactions for RNA: ENST00000583694.1

FGD4-216, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 3

Gene FGD4, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-216ENST00000583694 PIP4P2Q8N4L2 257 aa11.98□□□□□ -0.49
FGD4-216ENST00000583694 FXR2P51116 673 aaKnown RBP eCLIP11.96□□□□□ -0.49
FGD4-216ENST00000583694 SPDYE1Q8NFV5 336 aaPredicted RBP11.96□□□□□ -0.49
FGD4-216ENST00000583694 ERCC6Q03468 1493 aa11.95□□□□□ -0.5
FGD4-216ENST00000583694 FANCD2Q9BXW9 1451 aa11.94□□□□□ -0.5
FGD4-216ENST00000583694 CEP164Q9UPV0 1460 aa11.93□□□□□ -0.5
FGD4-216ENST00000583694 PDS5BQ9NTI5 1447 aa11.93□□□□□ -0.5
FGD4-216ENST00000583694 ABCC8Q09428 1581 aa11.92□□□□□ -0.5
FGD4-216ENST00000583694 CLEC11AQ9Y240 323 aa11.88□□□□□ -0.51
FGD4-216ENST00000583694 WRNQ14191 1432 aaPredicted RBP eCLIP11.84□□□□□ -0.51
FGD4-216ENST00000583694 SYNJ1O43426 1573 aa11.84□□□□□ -0.51
FGD4-216ENST00000583694 BIVM-ERCC5R4GMW8 1640 aa11.83□□□□□ -0.52
FGD4-216ENST00000583694 DNMBPQ6XZF7 1577 aa11.83□□□□□ -0.52
FGD4-216ENST00000583694 MRC2Q9UBG0 1479 aa11.83□□□□□ -0.52
FGD4-216ENST00000583694 THOC2Q8NI27 1593 aaKnown RBP11.82□□□□□ -0.52
FGD4-216ENST00000583694 TOP2BQ02880 1626 aa11.81□□□□□ -0.52
FGD4-216ENST00000583694 CUX1P39880 1505 aa11.81□□□□□ -0.52
FGD4-216ENST00000583694 URB2Q14146 1524 aaKnown RBP11.79□□□□□ -0.52
FGD4-216ENST00000583694 TOPBP1Q92547 1522 aa11.78□□□□□ -0.52
FGD4-216ENST00000583694 TRIM41Q8WV44 630 aa11.78□□□□□ -0.52
FGD4-216ENST00000583694 WDR62O43379 1518 aa11.76□□□□□ -0.53
FGD4-216ENST00000583694 HAX1O00165 279 aa11.75□□□□□ -0.53
FGD4-216ENST00000583694 PRKAR2AP13861 404 aaKnown RBP11.75□□□□□ -0.53
FGD4-216ENST00000583694 PRR29P0C7W0 189 aa11.74□□□□□ -0.53
FGD4-216ENST00000583694 FGD5Q6ZNL6 1462 aa11.74□□□□□ -0.53
FGD4-216ENST00000583694 SP7Q8TDD2 431 aaPredicted RBP11.73□□□□□ -0.53
FGD4-216ENST00000583694 SPDYE4A6NLX3 237 aa11.7□□□□□ -0.54
FGD4-216ENST00000583694 POLA1P09884 1462 aaPredicted RBP11.69□□□□□ -0.54
FGD4-216ENST00000583694 WDR97A6NE52 1622 aa11.68□□□□□ -0.54
FGD4-216ENST00000583694 STAG3Q9UJ98 1225 aa11.65□□□□□ -0.54
FGD4-216ENST00000583694 RAD54L2Q9Y4B4 1467 aa11.64□□□□□ -0.55
FGD4-216ENST00000583694 TARBP1Q13395 1621 aaKnown RBP11.63□□□□□ -0.55
FGD4-216ENST00000583694 IFT140Q96RY7 1462 aa11.63□□□□□ -0.55
FGD4-216ENST00000583694 SOGA1O94964 1423 aa11.62□□□□□ -0.55
FGD4-216ENST00000583694 CUX2O14529 1486 aa11.62□□□□□ -0.55
FGD4-216ENST00000583694 PBRM1Q86U86 1689 aa11.62□□□□□ -0.55
FGD4-216ENST00000583694 EIF4G3O43432 1585 aaKnown RBP11.59□□□□□ -0.55
FGD4-216ENST00000583694 CHADLQ6NUI6 762 aa11.59□□□□□ -0.55
FGD4-216ENST00000583694 ABCA10Q8WWZ4 1543 aa11.59□□□□□ -0.55
FGD4-216ENST00000583694 FAM9AQ8IZU1 332 aaPredicted RBP11.58□□□□□ -0.56
FGD4-216ENST00000583694 ABCA5Q8WWZ7 1642 aa11.57□□□□□ -0.56
FGD4-216ENST00000583694 C19orf67A6NJJ6 358 aa11.57□□□□□ -0.56
FGD4-216ENST00000583694 KIF27Q86VH2 1401 aa11.57□□□□□ -0.56
FGD4-216ENST00000583694 EEA1Q15075 1411 aa11.54□□□□□ -0.56
FGD4-216ENST00000583694 EVX2Q03828 476 aa11.54□□□□□ -0.56
FGD4-216ENST00000583694 ZNF608Q9ULD9 1512 aaPredicted RBP11.54□□□□□ -0.56
FGD4-216ENST00000583694 TDRD9Q8NDG6 1382 aaKnown RBP11.54□□□□□ -0.56
FGD4-216ENST00000583694 GAPVD1Q14C86 1478 aa11.53□□□□□ -0.56
FGD4-216ENST00000583694 RUSC2Q8N2Y8 1516 aa11.53□□□□□ -0.56
FGD4-216ENST00000583694 CUL7Q14999 1698 aa11.52□□□□□ -0.57
FGD4-216ENST00000583694 FARP1Q9Y4F1 1045 aaPredicted RBP11.5□□□□□ -0.57
FGD4-216ENST00000583694 AQRO60306 1485 aaKnown RBP eCLIP11.5□□□□□ -0.57
FGD4-216ENST00000583694 GRIN2BQ13224 1484 aa11.48□□□□□ -0.57
FGD4-216ENST00000583694 ERICH3Q5RHP9 1530 aa11.48□□□□□ -0.57
FGD4-216ENST00000583694 ADAMTS12P58397 1594 aa11.47□□□□□ -0.57
FGD4-216ENST00000583694 KIF21BO75037 1637 aa11.46□□□□□ -0.57
FGD4-216ENST00000583694 SNAPC4Q5SXM2 1469 aa11.45□□□□□ -0.58
FGD4-216ENST00000583694 CHD1O14646 1710 aa11.45□□□□□ -0.58
FGD4-216ENST00000583694 PROM2Q8N271 834 aa11.43□□□□□ -0.58
FGD4-216ENST00000583694 CREBZFQ9NS37 354 aa11.43□□□□□ -0.58
FGD4-216ENST00000583694 MAGI1Q96QZ7 1491 aaPredicted RBP11.43□□□□□ -0.58
FGD4-216ENST00000583694 CTTNBP2Q8WZ74 1663 aa11.42□□□□□ -0.58
FGD4-216ENST00000583694 GOLGA3Q08378 1498 aa11.41□□□□□ -0.58
FGD4-216ENST00000583694 IGF1RP08069 1367 aa11.4□□□□□ -0.59
FGD4-216ENST00000583694 CARMIL1Q5VZK9 1371 aa11.4□□□□□ -0.59
FGD4-216ENST00000583694 RAPGEF2Q9Y4G8 1499 aa11.39□□□□□ -0.59
FGD4-216ENST00000583694 FHAD1B1AJZ9 1412 aa11.39□□□□□ -0.59
FGD4-216ENST00000583694 CD44P16070 742 aaKnown RBP11.39□□□□□ -0.59
FGD4-216ENST00000583694 SYNJ2O15056 1496 aa11.38□□□□□ -0.59
FGD4-216ENST00000583694 CLCN6P51797 869 aa11.37□□□□□ -0.59
FGD4-216ENST00000583694 PRXQ9BXM0 1461 aa11.37□□□□□ -0.59
FGD4-216ENST00000583694 GABBR2O75899 941 aa11.35□□□□□ -0.59
FGD4-216ENST00000583694 UBTFP17480 764 aaKnown RBP11.35□□□□□ -0.59
FGD4-216ENST00000583694 GRIN2AQ12879 1464 aa11.34□□□□□ -0.59
FGD4-216ENST00000583694 CHMP7Q8WUX9 453 aaPredicted RBP11.34□□□□□ -0.59
FGD4-216ENST00000583694 NPM1P06748 294 aaKnown RBP eCLIP11.31□□□□□ -0.6
FGD4-216ENST00000583694 LOC105371045A0A1W2PR82 267 aa11.3□□□□□ -0.6
FGD4-216ENST00000583694 CEP170Q5SW79 1584 aa11.29□□□□□ -0.6
FGD4-216ENST00000583694 IQGAP2Q13576 1575 aa11.28□□□□□ -0.6
FGD4-216ENST00000583694 RANGAP1P46060 587 aaPredicted RBP11.28□□□□□ -0.6
FGD4-216ENST00000583694 PAK3O75914 559 aaPredicted RBP11.25□□□□□ -0.61
FGD4-216ENST00000583694 MNX1P50219 401 aaPredicted RBP11.25□□□□□ -0.61
FGD4-216ENST00000583694 ZRANB1Q9UGI0 708 aa11.25□□□□□ -0.61
FGD4-216ENST00000583694 TNIKQ9UKE5 1360 aa11.25□□□□□ -0.61
FGD4-216ENST00000583694 ZNF579Q8NAF0 562 aaKnown RBP11.24□□□□□ -0.61
FGD4-216ENST00000583694 NUP160Q12769 1436 aa11.23□□□□□ -0.61
FGD4-216ENST00000583694 CEP162Q5TB80 1403 aa11.22□□□□□ -0.61
FGD4-216ENST00000583694 KIAA0586Q9BVV6 1533 aa11.21□□□□□ -0.61
FGD4-216ENST00000583694 PLEKHG5O94827 1062 aa11.21□□□□□ -0.61
FGD4-216ENST00000583694 EFCAB5A4FU69 1503 aa11.19□□□□□ -0.62
FGD4-216ENST00000583694 CLASP1Q7Z460 1538 aa11.19□□□□□ -0.62
FGD4-216ENST00000583694 CLIP1P30622 1438 aa11.19□□□□□ -0.62
FGD4-216ENST00000583694 FKBP8Q14318 412 aa11.19□□□□□ -0.62
FGD4-216ENST00000583694 KIAA0556O60303 1618 aa11.17□□□□□ -0.62
FGD4-216ENST00000583694 SHROOM2Q13796 1616 aa11.17□□□□□ -0.62
FGD4-216ENST00000583694 SAMD9Q5K651 1589 aa11.16□□□□□ -0.62
FGD4-216ENST00000583694 MIER1Q8N108 512 aa11.16□□□□□ -0.62
FGD4-216ENST00000583694 UGGT2Q9NYU1 1516 aa11.15□□□□□ -0.62
FGD4-216ENST00000583694 CARMIL2Q6F5E8 1435 aa11.13□□□□□ -0.63
FGD4-216ENST00000583694 TTBK1Q5TCY1 1321 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms