RNA–Protein interactions for RNA: ENST00000577605.1

CASC3-205, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-205ENST00000577605 SOGA1O94964 1423 aa12.31□□□□□ -0.44
CASC3-205ENST00000577605 OSCARQ8IYS5 282 aa12.31□□□□□ -0.44
CASC3-205ENST00000577605 POLA1P09884 1462 aaPredicted RBP12.31□□□□□ -0.44
CASC3-205ENST00000577605 CUX1P39880 1505 aa12.27□□□□□ -0.44
CASC3-205ENST00000577605 ZNF608Q9ULD9 1512 aaPredicted RBP12.27□□□□□ -0.44
CASC3-205ENST00000577605 WDR97A6NE52 1622 aa12.27□□□□□ -0.44
CASC3-205ENST00000577605 FGD5Q6ZNL6 1462 aa12.27□□□□□ -0.45
CASC3-205ENST00000577605 TARBP1Q13395 1621 aaKnown RBP12.26□□□□□ -0.45
CASC3-205ENST00000577605 WRNQ14191 1432 aaPredicted RBP eCLIP12.24□□□□□ -0.45
CASC3-205ENST00000577605 AQRO60306 1485 aaKnown RBP eCLIP12.22□□□□□ -0.453e-6■■□□□ 12.5
CASC3-205ENST00000577605 RAD54L2Q9Y4B4 1467 aa12.22□□□□□ -0.45
CASC3-205ENST00000577605 TDRD9Q8NDG6 1382 aaKnown RBP12.21□□□□□ -0.45
CASC3-205ENST00000577605 EIF4G3O43432 1585 aaKnown RBP12.21□□□□□ -0.46
CASC3-205ENST00000577605 ZBTB12Q9Y330 459 aaPredicted RBP12.2□□□□□ -0.46
CASC3-205ENST00000577605 ABCA10Q8WWZ4 1543 aa12.19□□□□□ -0.46
CASC3-205ENST00000577605 GRIN2BQ13224 1484 aa12.19□□□□□ -0.46
CASC3-205ENST00000577605 TOP2BQ02880 1626 aa12.18□□□□□ -0.46
CASC3-205ENST00000577605 MAGI1Q96QZ7 1491 aaPredicted RBP12.16□□□□□ -0.46
CASC3-205ENST00000577605 GAPVD1Q14C86 1478 aa12.15□□□□□ -0.46
CASC3-205ENST00000577605 BIVM-ERCC5R4GMW8 1640 aa12.15□□□□□ -0.47
CASC3-205ENST00000577605 CHMP7Q8WUX9 453 aaPredicted RBP12.14□□□□□ -0.47
CASC3-205ENST00000577605 FBLN2P98095 1184 aa12.13□□□□□ -0.47
CASC3-205ENST00000577605 SNAPC4Q5SXM2 1469 aa12.11□□□□□ -0.47
CASC3-205ENST00000577605 SYNJ1O43426 1573 aa12.1□□□□□ -0.47
CASC3-205ENST00000577605 SYNJ2O15056 1496 aa12.1□□□□□ -0.47
CASC3-205ENST00000577605 RBM42Q9BTD8 480 aaKnown RBP12.08□□□□□ -0.48
CASC3-205ENST00000577605 ABCA5Q8WWZ7 1642 aa12.08□□□□□ -0.48
CASC3-205ENST00000577605 ERICH3Q5RHP9 1530 aa12.06□□□□□ -0.48
CASC3-205ENST00000577605 FHAD1B1AJZ9 1412 aa12.04□□□□□ -0.48
CASC3-205ENST00000577605 KIF27Q86VH2 1401 aa12.03□□□□□ -0.48
CASC3-205ENST00000577605 MKRN4PQ13434 485 aaPredicted RBP12.02□□□□□ -0.49
CASC3-205ENST00000577605 PBRM1Q86U86 1689 aa12□□□□□ -0.49
CASC3-205ENST00000577605 CHD1O14646 1710 aa12□□□□□ -0.49
CASC3-205ENST00000577605 AMER1Q5JTC6 1135 aaPredicted RBP11.99□□□□□ -0.49
CASC3-205ENST00000577605 GRIN2AQ12879 1464 aa11.99□□□□□ -0.49
CASC3-205ENST00000577605 ARHGEF11O15085 1522 aa11.99□□□□□ -0.49
CASC3-205ENST00000577605 TRIM41Q8WV44 630 aa11.98□□□□□ -0.49
CASC3-205ENST00000577605 RTN4Q9NQC3 1192 aaKnown RBP11.98□□□□□ -0.49
CASC3-205ENST00000577605 CLASP1Q7Z460 1538 aa11.97□□□□□ -0.49
CASC3-205ENST00000577605 ADAMTS12P58397 1594 aa11.96□□□□□ -0.49
CASC3-205ENST00000577605 IGF1RP08069 1367 aa11.96□□□□□ -0.49
CASC3-205ENST00000577605 RIMBP3CA6NJZ7 1639 aa11.96□□□□□ -0.5
CASC3-205ENST00000577605 RIMBP3BA6NNM3 1639 aa11.96□□□□□ -0.5
CASC3-205ENST00000577605 RIMBP3Q9UFD9 1639 aa11.96□□□□□ -0.5
CASC3-205ENST00000577605 NUP160Q12769 1436 aa11.95□□□□□ -0.5
CASC3-205ENST00000577605 CYB5RLQ6IPT4 315 aa11.93□□□□□ -0.5
CASC3-205ENST00000577605 CARMIL1Q5VZK9 1371 aa11.9□□□□□ -0.5
CASC3-205ENST00000577605 CUL7Q14999 1698 aa11.89□□□□□ -0.51
CASC3-205ENST00000577605 JPH4Q96JJ6 628 aa11.88□□□□□ -0.51
CASC3-205ENST00000577605 AKT1S1Q96B36 256 aa11.87□□□□□ -0.51
CASC3-205ENST00000577605 ARAP1Q96P48 1450 aa11.87□□□□□ -0.51
CASC3-205ENST00000577605 CEP170Q5SW79 1584 aa11.87□□□□□ -0.51
CASC3-205ENST00000577605 KIAA0586Q9BVV6 1533 aa11.86□□□□□ -0.51
CASC3-205ENST00000577605 SPDYE2BA6NHP3 402 aa11.85□□□□□ -0.51
CASC3-205ENST00000577605 SPDYE6P0CI01 402 aa11.85□□□□□ -0.51
CASC3-205ENST00000577605 SPDYE2Q495Y8 402 aa11.85□□□□□ -0.51
CASC3-205ENST00000577605 PRG4Q92954 1404 aaPredicted RBP11.82□□□□□ -0.52
CASC3-205ENST00000577605 RAPGEF2Q9Y4G8 1499 aa11.82□□□□□ -0.52
CASC3-205ENST00000577605 SHROOM2Q13796 1616 aa11.82□□□□□ -0.52
CASC3-205ENST00000577605 EEA1Q15075 1411 aa11.8□□□□□ -0.52
CASC3-205ENST00000577605 RUSC2Q8N2Y8 1516 aa11.79□□□□□ -0.52
CASC3-205ENST00000577605 REM2Q8IYK8 340 aaPredicted RBP11.78□□□□□ -0.52
CASC3-205ENST00000577605 CARMIL2Q6F5E8 1435 aa11.77□□□□□ -0.52
CASC3-205ENST00000577605 ZNF692Q9BU19 519 aaPredicted RBP11.77□□□□□ -0.53
CASC3-205ENST00000577605 SSUH2Q9Y2M2 353 aa11.74□□□□□ -0.53
CASC3-205ENST00000577605 PRXQ9BXM0 1461 aa11.74□□□□□ -0.53
CASC3-205ENST00000577605 NPM1P06748 294 aaKnown RBP eCLIP11.73□□□□□ -0.53
CASC3-205ENST00000577605 ERCC6L2Q5T890 1561 aa11.72□□□□□ -0.53
CASC3-205ENST00000577605 FAM9AQ8IZU1 332 aaPredicted RBP11.72□□□□□ -0.53
CASC3-205ENST00000577605 TNIKQ9UKE5 1360 aa11.71□□□□□ -0.53
CASC3-205ENST00000577605 CHRDL2Q6WN34 429 aa11.71□□□□□ -0.53
CASC3-205ENST00000577605 IQGAP2Q13576 1575 aa11.71□□□□□ -0.54
CASC3-205ENST00000577605 PTPRGP23470 1445 aa11.7□□□□□ -0.54
CASC3-205ENST00000577605 UGGT2Q9NYU1 1516 aa11.68□□□□□ -0.54
CASC3-205ENST00000577605 GOLGA3Q08378 1498 aa11.68□□□□□ -0.54
CASC3-205ENST00000577605 PITPNM1O00562 1244 aa11.66□□□□□ -0.54
CASC3-205ENST00000577605 POTEHQ6S545 545 aa11.65□□□□□ -0.54
CASC3-205ENST00000577605 DISP1Q96F81 1524 aa11.63□□□□□ -0.55
CASC3-205ENST00000577605 UHRF1BP1LA0JNW5 1464 aa11.63□□□□□ -0.55
CASC3-205ENST00000577605 UACAQ9BZF9 1416 aa11.61□□□□□ -0.55
CASC3-205ENST00000577605 SPDYE4A6NLX3 237 aa11.61□□□□□ -0.55
CASC3-205ENST00000577605 MAPKBP1O60336 1514 aa11.6□□□□□ -0.55
CASC3-205ENST00000577605 KIAA0556O60303 1618 aa11.58□□□□□ -0.56
CASC3-205ENST00000577605 ABCC2Q92887 1545 aa11.58□□□□□ -0.56
CASC3-205ENST00000577605 CTTNBP2Q8WZ74 1663 aa11.58□□□□□ -0.56
CASC3-205ENST00000577605 SPDYE1Q8NFV5 336 aaPredicted RBP11.57□□□□□ -0.56
CASC3-205ENST00000577605 ADCY10Q96PN6 1610 aa11.57□□□□□ -0.56
CASC3-205ENST00000577605 CLEC11AQ9Y240 323 aa11.56□□□□□ -0.56
CASC3-205ENST00000577605 KIF21BO75037 1637 aa11.56□□□□□ -0.56
CASC3-205ENST00000577605 ABCC10Q5T3U5 1492 aa11.56□□□□□ -0.56
CASC3-205ENST00000577605 TTBK1Q5TCY1 1321 aaPredicted RBP11.56□□□□□ -0.56
CASC3-205ENST00000577605 FAM69CQ0P6D2 419 aa11.55□□□□□ -0.56
CASC3-205ENST00000577605 PLB1Q6P1J6 1458 aa11.55□□□□□ -0.56
CASC3-205ENST00000577605 KDM5BQ9UGL1 1544 aa11.54□□□□□ -0.56
CASC3-205ENST00000577605 UBTFP17480 764 aaKnown RBP11.52□□□□□ -0.57
CASC3-205ENST00000577605 PIP4P2Q8N4L2 257 aa11.5□□□□□ -0.57
CASC3-205ENST00000577605 ASXL2Q76L83 1435 aa11.5□□□□□ -0.57
CASC3-205ENST00000577605 EFCAB5A4FU69 1503 aa11.49□□□□□ -0.57
CASC3-205ENST00000577605 P3H3Q8IVL6 736 aa11.48□□□□□ -0.57
CASC3-205ENST00000577605 ABCA8O94911 1581 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms