RNA–Protein interactions for RNA: ENST00000577605.1

CASC3-205, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-205ENST00000577605 AEBP2Q6ZN18 517 aaPredicted RBP21.4■■□□□ 1.02
CASC3-205ENST00000577605 CHIC1Q5VXU3 224 aa20.6■□□□□ 0.89
CASC3-205ENST00000577605 SENP3Q9H4L4 574 aaPredicted RBP18.18■□□□□ 0.5
CASC3-205ENST00000577605 PHF23Q9BUL5 403 aaPredicted RBP18.11■□□□□ 0.49
CASC3-205ENST00000577605 NISCHQ9Y2I1 1504 aa17.04■□□□□ 0.32
CASC3-205ENST00000577605 FOXD1Q16676 465 aa16.91■□□□□ 0.3
CASC3-205ENST00000577605 PLPPR3Q6T4P5 718 aa16.61■□□□□ 0.25
CASC3-205ENST00000577605 PPP6R1Q9UPN7 881 aa16.07■□□□□ 0.16
CASC3-205ENST00000577605 ADRA2BP18089 450 aa16.05■□□□□ 0.16
CASC3-205ENST00000577605 PIAS4Q8N2W9 510 aaPredicted RBP15.9■□□□□ 0.14
CASC3-205ENST00000577605 MSH5O43196 834 aa15.69■□□□□ 0.1
CASC3-205ENST00000577605 CCDC180Q9P1Z9 1646 aa15.16■□□□□ 0.02
CASC3-205ENST00000577605 ABCC9O60706 1549 aa14.86□□□□□ -0.03
CASC3-205ENST00000577605 POTEDQ86YR6 584 aa14.78□□□□□ -0.04
CASC3-205ENST00000577605 MAPK8IP2Q13387 824 aaPredicted RBP14.64□□□□□ -0.07
CASC3-205ENST00000577605 SCAF1Q9H7N4 1312 aaKnown RBP14.64□□□□□ -0.07
CASC3-205ENST00000577605 PPP4R3CPQ6ZMV5 832 aa14.6□□□□□ -0.07
CASC3-205ENST00000577605 DMRT2Q9Y5R5 561 aa14.47□□□□□ -0.09
CASC3-205ENST00000577605 RB1CC1Q8TDY2 1594 aa14.34□□□□□ -0.11
CASC3-205ENST00000577605 NACADO15069 1562 aa14.33□□□□□ -0.12
CASC3-205ENST00000577605 MYO15BQ96JP2 1530 aa14.29□□□□□ -0.12
CASC3-205ENST00000577605 DCAF8L2P0C7V8 631 aa14.26□□□□□ -0.13
CASC3-205ENST00000577605 CNKSR2Q8WXI2 1034 aa14.24□□□□□ -0.13
CASC3-205ENST00000577605 ZCCHC6Q5VYS8 1495 aaKnown RBP14.17□□□□□ -0.14
CASC3-205ENST00000577605 DCAF1Q9Y4B6 1507 aa14.16□□□□□ -0.14
CASC3-205ENST00000577605 NCBP3Q53F19 620 aaKnown RBP14.12□□□□□ -0.15
CASC3-205ENST00000577605 HOXD11P31277 338 aaPredicted RBP14.04□□□□□ -0.16
CASC3-205ENST00000577605 RNF216Q9NWF9 866 aaPredicted RBP14.03□□□□□ -0.16
CASC3-205ENST00000577605 KCNA4P22459 653 aa13.99□□□□□ -0.17
CASC3-205ENST00000577605 NPM3O75607 178 aaKnown RBP13.95□□□□□ -0.18
CASC3-205ENST00000577605 DCAF8L1A6NGE4 600 aa13.89□□□□□ -0.19
CASC3-205ENST00000577605 PABPN1Q86U42 306 aaKnown RBP eCLIP13.89□□□□□ -0.19
CASC3-205ENST00000577605 SHROOM4Q9ULL8 1493 aa13.86□□□□□ -0.19
CASC3-205ENST00000577605 BICRAQ9NZM4 1560 aa13.81□□□□□ -0.2
CASC3-205ENST00000577605 UNC13AQ9UPW8 1703 aa13.8□□□□□ -0.2
CASC3-205ENST00000577605 SCRIBQ14160 1630 aa13.75□□□□□ -0.21
CASC3-205ENST00000577605 DNAJC5BQ9UF47 199 aa13.69□□□□□ -0.22
CASC3-205ENST00000577605 EIF4G1Q04637 1599 aaKnown RBP13.49□□□□□ -0.25
CASC3-205ENST00000577605 CC2D2AQ9P2K1 1620 aa13.43□□□□□ -0.26
CASC3-205ENST00000577605 RNF39Q9H2S5 420 aa13.43□□□□□ -0.26
CASC3-205ENST00000577605 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.41□□□□□ -0.262e-7■□□□□ 8.6
CASC3-205ENST00000577605 CECR2Q9BXF3 1484 aa13.41□□□□□ -0.26
CASC3-205ENST00000577605 CACNB1Q02641 598 aaPredicted RBP13.28□□□□□ -0.28
CASC3-205ENST00000577605 SLC4A1APQ9BWU0 796 aaKnown RBP13.25□□□□□ -0.29
CASC3-205ENST00000577605 NCAPD3P42695 1498 aa13.24□□□□□ -0.29
CASC3-205ENST00000577605 SLC4A2P04920 1241 aa13.24□□□□□ -0.29
CASC3-205ENST00000577605 BAZ1AQ9NRL2 1556 aaPredicted RBP13.24□□□□□ -0.29
CASC3-205ENST00000577605 C1QBPQ07021 282 aaKnown RBP13.23□□□□□ -0.29
CASC3-205ENST00000577605 SMARCA2P51531 1590 aa13.2□□□□□ -0.3
CASC3-205ENST00000577605 ATAD2BQ9ULI0 1458 aa13.19□□□□□ -0.3
CASC3-205ENST00000577605 SMARCA4P51532 1647 aa13.18□□□□□ -0.3
CASC3-205ENST00000577605 U3KPZ7 1027 aaPredicted RBP13.17□□□□□ -0.3
CASC3-205ENST00000577605 HMGXB3Q12766 1538 aa13.13□□□□□ -0.31
CASC3-205ENST00000577605 PEG3Q9GZU2 1588 aa13.12□□□□□ -0.31
CASC3-205ENST00000577605 EHMT2Q96KQ7 1210 aa13.09□□□□□ -0.31
CASC3-205ENST00000577605 BAZ1BQ9UIG0 1483 aaKnown RBP13.08□□□□□ -0.32
CASC3-205ENST00000577605 MROH2BQ7Z745 1585 aa13.07□□□□□ -0.32
CASC3-205ENST00000577605 RSF1Q96T23 1441 aaPredicted RBP12.96□□□□□ -0.34
CASC3-205ENST00000577605 FOXD4L1Q9NU39 408 aa12.93□□□□□ -0.34
CASC3-205ENST00000577605 SPINK5Q9NQ38 1064 aaPredicted RBP12.89□□□□□ -0.35
CASC3-205ENST00000577605 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.88□□□□□ -0.35
CASC3-205ENST00000577605 ZBTB22O15209 634 aa12.88□□□□□ -0.35
CASC3-205ENST00000577605 MYCNP04198 464 aaPredicted RBP12.88□□□□□ -0.35
CASC3-205ENST00000577605 HNRNPUL2Q1KMD3 747 aaKnown RBP12.88□□□□□ -0.35
CASC3-205ENST00000577605 ERCC6Q03468 1493 aa12.88□□□□□ -0.35
CASC3-205ENST00000577605 WIZO95785 1651 aa12.88□□□□□ -0.35
CASC3-205ENST00000577605 LAMC3Q9Y6N6 1575 aa12.86□□□□□ -0.35
CASC3-205ENST00000577605 CADPSQ9ULU8 1353 aa12.85□□□□□ -0.35
CASC3-205ENST00000577605 CAPN15O75808 1086 aa12.85□□□□□ -0.35
CASC3-205ENST00000577605 PDS5BQ9NTI5 1447 aa12.85□□□□□ -0.35
CASC3-205ENST00000577605 TOP2AP11388 1531 aaKnown RBP12.83□□□□□ -0.35
CASC3-205ENST00000577605 SAMD1Q6SPF0 538 aaPredicted RBP12.83□□□□□ -0.36
CASC3-205ENST00000577605 CUX2O14529 1486 aa12.81□□□□□ -0.36
CASC3-205ENST00000577605 NESP48681 1621 aa12.8□□□□□ -0.36
CASC3-205ENST00000577605 APLP2Q06481 763 aa12.79□□□□□ -0.36
CASC3-205ENST00000577605 CFTRP13569 1480 aa12.74□□□□□ -0.37
CASC3-205ENST00000577605 TRHP20396 242 aaPredicted RBP12.72□□□□□ -0.37
CASC3-205ENST00000577605 DSG3P32926 999 aa12.69□□□□□ -0.38
CASC3-205ENST00000577605 ZNF219Q9P2Y4 722 aaPredicted RBP12.69□□□□□ -0.38
CASC3-205ENST00000577605 CCDC88BA6NC98 1476 aa12.68□□□□□ -0.38
CASC3-205ENST00000577605 FANCD2Q9BXW9 1451 aa12.65□□□□□ -0.38
CASC3-205ENST00000577605 CEP164Q9UPV0 1460 aa12.65□□□□□ -0.38
CASC3-205ENST00000577605 MRC2Q9UBG0 1479 aa12.65□□□□□ -0.38
CASC3-205ENST00000577605 THOC2Q8NI27 1593 aaKnown RBP12.63□□□□□ -0.39
CASC3-205ENST00000577605 KIF21AQ7Z4S6 1674 aa12.6□□□□□ -0.39
CASC3-205ENST00000577605 WDR62O43379 1518 aa12.59□□□□□ -0.39
CASC3-205ENST00000577605 ABCB7O75027 752 aa12.59□□□□□ -0.39
CASC3-205ENST00000577605 ATF5Q9Y2D1 282 aaPredicted RBP12.59□□□□□ -0.39
CASC3-205ENST00000577605 SUPT5HO00267 1087 aaKnown RBP12.55□□□□□ -0.4
CASC3-205ENST00000577605 CSRNP3Q8WYN3 585 aa12.55□□□□□ -0.4
CASC3-205ENST00000577605 ABCC8Q09428 1581 aa12.54□□□□□ -0.4
CASC3-205ENST00000577605 DNAJC5Q9H3Z4 198 aa12.5□□□□□ -0.41
CASC3-205ENST00000577605 URB2Q14146 1524 aaKnown RBP12.49□□□□□ -0.41
CASC3-205ENST00000577605 PRDM2Q13029 1718 aa12.48□□□□□ -0.41
CASC3-205ENST00000577605 ATXN8OSP0DMR3 200 aa12.47□□□□□ -0.41
CASC3-205ENST00000577605 POLA2Q14181 598 aa12.44□□□□□ -0.42
CASC3-205ENST00000577605 IFT140Q96RY7 1462 aa12.43□□□□□ -0.42
CASC3-205ENST00000577605 TOPBP1Q92547 1522 aa12.42□□□□□ -0.42
CASC3-205ENST00000577605 SLC24A1O60721 1099 aa12.42□□□□□ -0.42
CASC3-205ENST00000577605 DNMBPQ6XZF7 1577 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms