RNA–Protein interactions for RNA: ENST00000574049.1

RPA1-207, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 3,849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-207ENST00000574049 URB2Q14146 1524 aaKnown RBP11.23□□□□□ -0.61
RPA1-207ENST00000574049 TOP2BQ02880 1626 aa11.23□□□□□ -0.61
RPA1-207ENST00000574049 LAMC3Q9Y6N6 1575 aa11.23□□□□□ -0.61
RPA1-207ENST00000574049 ZEB1P37275 1124 aaPredicted RBP11.2□□□□□ -0.62
RPA1-207ENST00000574049 MRC2Q9UBG0 1479 aa11.18□□□□□ -0.62
RPA1-207ENST00000574049 GAPVD1Q14C86 1478 aa11.16□□□□□ -0.62
RPA1-207ENST00000574049 DNMBPQ6XZF7 1577 aa11.15□□□□□ -0.62
RPA1-207ENST00000574049 TULP1O00294 542 aaPredicted RBP11.13□□□□□ -0.63
RPA1-207ENST00000574049 TIMELESSQ9UNS1 1208 aa11.13□□□□□ -0.63
RPA1-207ENST00000574049 ZNF608Q9ULD9 1512 aaPredicted RBP11.13□□□□□ -0.63
RPA1-207ENST00000574049 KIF21AQ7Z4S6 1674 aa11.12□□□□□ -0.63
RPA1-207ENST00000574049 FAM50AQ14320 339 aaKnown RBP11.11□□□□□ -0.63
RPA1-207ENST00000574049 SCAF1Q9H7N4 1312 aaKnown RBP11.1□□□□□ -0.63
RPA1-207ENST00000574049 GTF3C3Q9Y5Q9 886 aa11.1□□□□□ -0.63
RPA1-207ENST00000574049 DIEXFQ68CQ4 756 aaKnown RBP11.08□□□□□ -0.64
RPA1-207ENST00000574049 BIVM-ERCC5R4GMW8 1640 aa11.08□□□□□ -0.64
RPA1-207ENST00000574049 KANK4Q5T7N3 995 aaPredicted RBP11.08□□□□□ -0.64
RPA1-207ENST00000574049 PRXQ9BXM0 1461 aa11.07□□□□□ -0.64
RPA1-207ENST00000574049 FHOD3Q2V2M9 1422 aa11.06□□□□□ -0.64
RPA1-207ENST00000574049 ABCA10Q8WWZ4 1543 aa11.06□□□□□ -0.64
RPA1-207ENST00000574049 POLR3GLQ9BT43 218 aa11.05□□□□□ -0.64
RPA1-207ENST00000574049 TPRNQ4KMQ1 711 aa11.04□□□□□ -0.64
RPA1-207ENST00000574049 BCANQ96GW7 911 aa11.03□□□□□ -0.64
RPA1-207ENST00000574049 JPH4Q96JJ6 628 aa11.03□□□□□ -0.64
RPA1-207ENST00000574049 IFT140Q96RY7 1462 aa11.03□□□□□ -0.64
RPA1-207ENST00000574049 GRIN2BQ13224 1484 aa11.01□□□□□ -0.65
RPA1-207ENST00000574049 ZNF777Q9ULD5 760 aaPredicted RBP11.01□□□□□ -0.65
RPA1-207ENST00000574049 SNAPC4Q5SXM2 1469 aa11□□□□□ -0.65
RPA1-207ENST00000574049 VPS8Q8N3P4 1428 aa11□□□□□ -0.65
RPA1-207ENST00000574049 TAOK2Q9UL54 1235 aa11□□□□□ -0.65
RPA1-207ENST00000574049 KIF21BO75037 1637 aa10.98□□□□□ -0.65
RPA1-207ENST00000574049 FHAD1B1AJZ9 1412 aa10.98□□□□□ -0.65
RPA1-207ENST00000574049 KCNH8Q96L42 1107 aa10.97□□□□□ -0.65
RPA1-207ENST00000574049 ADRA2BP18089 450 aa10.97□□□□□ -0.65
RPA1-207ENST00000574049 NEUROD1Q13562 356 aa10.97□□□□□ -0.65
RPA1-207ENST00000574049 MTUS2Q5JR59 1369 aa10.97□□□□□ -0.65
RPA1-207ENST00000574049 ARAP1Q96P48 1450 aa10.97□□□□□ -0.65
RPA1-207ENST00000574049 PRDM2Q13029 1718 aa10.96□□□□□ -0.66
RPA1-207ENST00000574049 HAP1P54257 671 aaPredicted RBP10.95□□□□□ -0.66
RPA1-207ENST00000574049 ARHGAP35Q9NRY4 1499 aa10.95□□□□□ -0.66
RPA1-207ENST00000574049 CHIC2Q9UKJ5 165 aa10.94□□□□□ -0.66
RPA1-207ENST00000574049 MYT1LQ9UL68 1186 aa10.94□□□□□ -0.66
RPA1-207ENST00000574049 ERICH3Q5RHP9 1530 aa10.93□□□□□ -0.66
RPA1-207ENST00000574049 ACIN1Q9UKV3 1341 aaKnown RBP10.92□□□□□ -0.66
RPA1-207ENST00000574049 WDR62O43379 1518 aa10.92□□□□□ -0.66
RPA1-207ENST00000574049 CDK11AQ9UQ88 783 aaPredicted RBP10.91□□□□□ -0.66
RPA1-207ENST00000574049 OSCARQ8IYS5 282 aa10.88□□□□□ -0.67
RPA1-207ENST00000574049 PLEKHD1A6NEE1 506 aa10.88□□□□□ -0.67
RPA1-207ENST00000574049 ERICH6Q7L0X2 663 aa10.87□□□□□ -0.67
RPA1-207ENST00000574049 TARBP1Q13395 1621 aaKnown RBP10.87□□□□□ -0.67
RPA1-207ENST00000574049 CARMIL2Q6F5E8 1435 aa10.86□□□□□ -0.67
RPA1-207ENST00000574049 GRIN2AQ12879 1464 aa10.85□□□□□ -0.67
RPA1-207ENST00000574049 FMN1Q68DA7 1419 aa10.85□□□□□ -0.67
RPA1-207ENST00000574049 TRIM52Q96A61 297 aa10.85□□□□□ -0.67
RPA1-207ENST00000574049 NPM1P06748 294 aaKnown RBP eCLIP10.85□□□□□ -0.67
RPA1-207ENST00000574049 ARXQ96QS3 562 aa10.85□□□□□ -0.67
RPA1-207ENST00000574049 EIF4G3O43432 1585 aaKnown RBP10.84□□□□□ -0.67
RPA1-207ENST00000574049 RRP7BPQ9NSQ0 103 aa10.84□□□□□ -0.67
RPA1-207ENST00000574049 SYNJ2O15056 1496 aa10.84□□□□□ -0.67
RPA1-207ENST00000574049 CYB5RLQ6IPT4 315 aa10.83□□□□□ -0.68
RPA1-207ENST00000574049 THOC2Q8NI27 1593 aaKnown RBP10.83□□□□□ -0.68
RPA1-207ENST00000574049 PRG4Q92954 1404 aaPredicted RBP10.83□□□□□ -0.68
RPA1-207ENST00000574049 PTPRGP23470 1445 aa10.83□□□□□ -0.68
RPA1-207ENST00000574049 ABCA5Q8WWZ7 1642 aa10.81□□□□□ -0.68
RPA1-207ENST00000574049 CUL7Q14999 1698 aa10.81□□□□□ -0.68
RPA1-207ENST00000574049 MAGI1Q96QZ7 1491 aaPredicted RBP10.81□□□□□ -0.68
RPA1-207ENST00000574049 NEFLP07196 543 aa10.8□□□□□ -0.68
RPA1-207ENST00000574049 CFDP1Q9UEE9 299 aaPredicted RBP10.8□□□□□ -0.68
RPA1-207ENST00000574049 KIAA0586Q9BVV6 1533 aa10.8□□□□□ -0.68
RPA1-207ENST00000574049 ZNF326Q5BKZ1 582 aaKnown RBP10.79□□□□□ -0.68
RPA1-207ENST00000574049 PODXL2Q9NZ53 605 aa10.79□□□□□ -0.68
RPA1-207ENST00000574049 HIRIP3Q9BW71 556 aaPredicted RBP10.78□□□□□ -0.68
RPA1-207ENST00000574049 CCNB3Q8WWL7 1395 aa10.78□□□□□ -0.68
RPA1-207ENST00000574049 IQGAP2Q13576 1575 aa10.77□□□□□ -0.69
RPA1-207ENST00000574049 SENP3-EIF4A1A0A087X0R7 540 aa10.77□□□□□ -0.69
RPA1-207ENST00000574049 ADAMTS12P58397 1594 aa10.77□□□□□ -0.69
RPA1-207ENST00000574049 ZNF644Q9H582 1327 aaPredicted RBP10.76□□□□□ -0.69
RPA1-207ENST00000574049 PHLDB1Q86UU1 1377 aa10.76□□□□□ -0.69
RPA1-207ENST00000574049 PLB1Q6P1J6 1458 aa10.75□□□□□ -0.69
RPA1-207ENST00000574049 PBRM1Q86U86 1689 aa10.75□□□□□ -0.69
RPA1-207ENST00000574049 CASKIN1Q8WXD9 1431 aa10.74□□□□□ -0.69
RPA1-207ENST00000574049 HOMEZQ8IX15 550 aa10.74□□□□□ -0.69
RPA1-207ENST00000574049 CDK13Q14004 1512 aaKnown RBP10.72□□□□□ -0.69
RPA1-207ENST00000574049 ZNF316A6NFI3 1004 aaPredicted RBP10.71□□□□□ -0.69
RPA1-207ENST00000574049 LRRC9Q6ZRR7 1453 aa10.71□□□□□ -0.69
RPA1-207ENST00000574049 MIER1Q8N108 512 aa10.71□□□□□ -0.69
RPA1-207ENST00000574049 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.71□□□□□ -0.695e-6■■□□□ 14.4
RPA1-207ENST00000574049 PCF11O94913 1555 aaKnown RBP10.71□□□□□ -0.7
RPA1-207ENST00000574049 HNRNPMP52272 730 aaKnown RBP eCLIP10.71□□□□□ -0.7
RPA1-207ENST00000574049 WDR97A6NE52 1622 aa10.7□□□□□ -0.7
RPA1-207ENST00000574049 TSPY4P0CV99 314 aa10.7□□□□□ -0.7
RPA1-207ENST00000574049 TSPY10P0CW01 314 aa10.7□□□□□ -0.7
RPA1-207ENST00000574049 PLCB2Q00722 1185 aa10.7□□□□□ -0.7
RPA1-207ENST00000574049 EFCAB5A4FU69 1503 aa10.69□□□□□ -0.7
RPA1-207ENST00000574049 ZBTB22O15209 634 aa10.69□□□□□ -0.7
RPA1-207ENST00000574049 CEP170Q5SW79 1584 aa10.68□□□□□ -0.7
RPA1-207ENST00000574049 FKBP8Q14318 412 aa10.68□□□□□ -0.7
RPA1-207ENST00000574049 FYCO1Q9BQS8 1478 aa10.67□□□□□ -0.7
RPA1-207ENST00000574049 NUP160Q12769 1436 aa10.67□□□□□ -0.7
RPA1-207ENST00000574049 DISP1Q96F81 1524 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms