RNA–Protein interactions for RNA: ENST00000573674.1

SLC52A1-204, Transcript of solute carrier family 52 member 1, humanhuman

TSL 2

Gene SLC52A1, Length 2,490 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-204ENST00000573674 CARMIL1Q5VZK9 1371 aa21.28■■□□□ 1
SLC52A1-204ENST00000573674 APLP2Q06481 763 aa21.26■□□□□ 0.99
SLC52A1-204ENST00000573674 URB2Q14146 1524 aaKnown RBP21.26■□□□□ 0.99
SLC52A1-204ENST00000573674 ABCA10Q8WWZ4 1543 aa21.22■□□□□ 0.99
SLC52A1-204ENST00000573674 PDS5BQ9NTI5 1447 aa21.21■□□□□ 0.99
SLC52A1-204ENST00000573674 ARHGAP35Q9NRY4 1499 aa21.19■□□□□ 0.98
SLC52A1-204ENST00000573674 KIF21AQ7Z4S6 1674 aa21.15■□□□□ 0.98
SLC52A1-204ENST00000573674 KANK4Q5T7N3 995 aaPredicted RBP21.12■□□□□ 0.97
SLC52A1-204ENST00000573674 TDRD9Q8NDG6 1382 aaKnown RBP21.11■□□□□ 0.97
SLC52A1-204ENST00000573674 PRKCSHP14314 528 aaPredicted RBP21.09■□□□□ 0.97
SLC52A1-204ENST00000573674 BCANQ96GW7 911 aa21.06■□□□□ 0.96
SLC52A1-204ENST00000573674 WDR97A6NE52 1622 aa21.05■□□□□ 0.96
SLC52A1-204ENST00000573674 KCNH8Q96L42 1107 aa21.05■□□□□ 0.96
SLC52A1-204ENST00000573674 FKBP8Q14318 412 aa21.04■□□□□ 0.96
SLC52A1-204ENST00000573674 RBM19Q9Y4C8 960 aaKnown RBP21.04■□□□□ 0.96
SLC52A1-204ENST00000573674 P3H3Q8IVL6 736 aa21.03■□□□□ 0.96
SLC52A1-204ENST00000573674 GAPVD1Q14C86 1478 aa20.99■□□□□ 0.95
SLC52A1-204ENST00000573674 CUL7Q14999 1698 aa20.99■□□□□ 0.95
SLC52A1-204ENST00000573674 ABCA5Q8WWZ7 1642 aa20.99■□□□□ 0.95
SLC52A1-204ENST00000573674 RRBP1Q9P2E9 1410 aaKnown RBP20.98■□□□□ 0.95
SLC52A1-204ENST00000573674 TARBP1Q13395 1621 aaKnown RBP20.94■□□□□ 0.94
SLC52A1-204ENST00000573674 FHOD3Q2V2M9 1422 aa20.91■□□□□ 0.94
SLC52A1-204ENST00000573674 MRC2Q9UBG0 1479 aa20.91■□□□□ 0.94
SLC52A1-204ENST00000573674 NEFLP07196 543 aa20.9■□□□□ 0.94
SLC52A1-204ENST00000573674 ATP1B4Q9UN42 357 aaPredicted RBP20.87■□□□□ 0.93
SLC52A1-204ENST00000573674 CTTNBP2Q8WZ74 1663 aa20.87■□□□□ 0.93
SLC52A1-204ENST00000573674 AQRO60306 1485 aaKnown RBP eCLIP20.87■□□□□ 0.93
SLC52A1-204ENST00000573674 TIAM1Q13009 1591 aa20.85■□□□□ 0.93
SLC52A1-204ENST00000573674 FHAD1B1AJZ9 1412 aa20.84■□□□□ 0.93
SLC52A1-204ENST00000573674 MSH5O43196 834 aa20.84■□□□□ 0.93
SLC52A1-204ENST00000573674 PCF11O94913 1555 aaKnown RBP20.83■□□□□ 0.93
SLC52A1-204ENST00000573674 MAPKBP1O60336 1514 aa20.83■□□□□ 0.93
SLC52A1-204ENST00000573674 CCNB3Q8WWL7 1395 aa20.82■□□□□ 0.92
SLC52A1-204ENST00000573674 EFCAB5A4FU69 1503 aa20.81■□□□□ 0.92
SLC52A1-204ENST00000573674 MAP3K1Q13233 1512 aa20.79■□□□□ 0.92
SLC52A1-204ENST00000573674 LRRC9Q6ZRR7 1453 aa20.79■□□□□ 0.92
SLC52A1-204ENST00000573674 DDX10Q13206 875 aaKnown RBP20.79■□□□□ 0.92
SLC52A1-204ENST00000573674 ZNF608Q9ULD9 1512 aaPredicted RBP20.77■□□□□ 0.92
SLC52A1-204ENST00000573674 CCER2I3L3R5 266 aa20.77■□□□□ 0.92
SLC52A1-204ENST00000573674 PPP1R15AO75807 674 aaPredicted RBP20.77■□□□□ 0.92
SLC52A1-204ENST00000573674 FANCIQ9NVI1 1328 aa20.77■□□□□ 0.92
SLC52A1-204ENST00000573674 ITGAEP38570 1179 aa20.77■□□□□ 0.91
SLC52A1-204ENST00000573674 PBRM1Q86U86 1689 aa20.76■□□□□ 0.91
SLC52A1-204ENST00000573674 WDR62O43379 1518 aa20.75■□□□□ 0.91
SLC52A1-204ENST00000573674 RAB3GAP2Q9H2M9 1393 aa20.75■□□□□ 0.91
SLC52A1-204ENST00000573674 ERCC6Q03468 1493 aa20.73■□□□□ 0.91
SLC52A1-204ENST00000573674 CASKIN1Q8WXD9 1431 aa20.73■□□□□ 0.91
SLC52A1-204ENST00000573674 FYCO1Q9BQS8 1478 aa20.72■□□□□ 0.91
SLC52A1-204ENST00000573674 PHLDB1Q86UU1 1377 aa20.72■□□□□ 0.91
SLC52A1-204ENST00000573674 IFT140Q96RY7 1462 aa20.71■□□□□ 0.91
SLC52A1-204ENST00000573674 CFAP43Q8NDM7 1665 aa20.71■□□□□ 0.91
SLC52A1-204ENST00000573674 GRIN2BQ13224 1484 aa20.7■□□□□ 0.9
SLC52A1-204ENST00000573674 SAMD9Q5K651 1589 aa20.7■□□□□ 0.9
SLC52A1-204ENST00000573674 FMN1Q68DA7 1419 aa20.7■□□□□ 0.9
SLC52A1-204ENST00000573674 ADAMTS12P58397 1594 aa20.69■□□□□ 0.9
SLC52A1-204ENST00000573674 TRIM52Q96A61 297 aa20.69■□□□□ 0.9
SLC52A1-204ENST00000573674 SNAPC4Q5SXM2 1469 aa20.68■□□□□ 0.9
SLC52A1-204ENST00000573674 ANP32CO43423 234 aa20.64■□□□□ 0.89
SLC52A1-204ENST00000573674 SETD5Q9C0A6 1442 aa20.63■□□□□ 0.89
SLC52A1-204ENST00000573674 TIMELESSQ9UNS1 1208 aa20.62■□□□□ 0.89
SLC52A1-204ENST00000573674 FAM50AQ14320 339 aaKnown RBP20.62■□□□□ 0.89
SLC52A1-204ENST00000573674 MYT1LQ9UL68 1186 aa20.62■□□□□ 0.89
SLC52A1-204ENST00000573674 THOC2Q8NI27 1593 aaKnown RBP20.6■□□□□ 0.89
SLC52A1-204ENST00000573674 ERICH6Q7L0X2 663 aa20.6■□□□□ 0.89
SLC52A1-204ENST00000573674 CDK11AQ9UQ88 783 aaPredicted RBP20.59■□□□□ 0.89
SLC52A1-204ENST00000573674 IQGAP2Q13576 1575 aa20.59■□□□□ 0.89
SLC52A1-204ENST00000573674 EIF4G3O43432 1585 aaKnown RBP20.58■□□□□ 0.89
SLC52A1-204ENST00000573674 SIN3AQ96ST3 1273 aa20.58■□□□□ 0.88
SLC52A1-204ENST00000573674 LRRIQ1Q96JM4 1722 aa20.57■□□□□ 0.88
SLC52A1-204ENST00000573674 MTUS2Q5JR59 1369 aa20.55■□□□□ 0.88
SLC52A1-204ENST00000573674 GRIN2AQ12879 1464 aa20.49■□□□□ 0.87
SLC52A1-204ENST00000573674 ARID3CA6NKF2 412 aa20.49■□□□□ 0.87
SLC52A1-204ENST00000573674 HIRIP3Q9BW71 556 aaPredicted RBP20.49■□□□□ 0.87
SLC52A1-204ENST00000573674 ERICH6BQ5W0A0 696 aa20.48■□□□□ 0.87
SLC52A1-204ENST00000573674 FBLN2P98095 1184 aa20.47■□□□□ 0.87
SLC52A1-204ENST00000573674 KIAA0586Q9BVV6 1533 aa20.46■□□□□ 0.87
SLC52A1-204ENST00000573674 UGGT2Q9NYU1 1516 aa20.46■□□□□ 0.87
SLC52A1-204ENST00000573674 CHMP7Q8WUX9 453 aaPredicted RBP20.45■□□□□ 0.86
SLC52A1-204ENST00000573674 FGD6Q6ZV73 1430 aa20.45■□□□□ 0.86
SLC52A1-204ENST00000573674 DEKP35659 375 aaKnown RBP20.45■□□□□ 0.86
SLC52A1-204ENST00000573674 MAGI3Q5TCQ9 1506 aa20.45■□□□□ 0.86
SLC52A1-204ENST00000573674 NCOA2Q15596 1464 aa20.44■□□□□ 0.86
SLC52A1-204ENST00000573674 MAGI1Q96QZ7 1491 aaPredicted RBP20.42■□□□□ 0.86
SLC52A1-204ENST00000573674 DISP1Q96F81 1524 aa20.42■□□□□ 0.86
SLC52A1-204ENST00000573674 IRX6P78412 446 aaPredicted RBP20.42■□□□□ 0.86
SLC52A1-204ENST00000573674 HNRNPUQ00839 825 aaKnown RBP eCLIP20.4■□□□□ 0.86
SLC52A1-204ENST00000573674 EPRSP07814 1512 aaKnown RBP20.4■□□□□ 0.86
SLC52A1-204ENST00000573674 CDK13Q14004 1512 aaKnown RBP20.4■□□□□ 0.86
SLC52A1-204ENST00000573674 HECW1Q76N89 1606 aa20.4■□□□□ 0.86
SLC52A1-204ENST00000573674 PPP4R2Q9NY27 417 aa20.39■□□□□ 0.86
SLC52A1-204ENST00000573674 SYNJ2O15056 1496 aa20.39■□□□□ 0.85
SLC52A1-204ENST00000573674 EHBP1L1Q8N3D4 1523 aa20.39■□□□□ 0.85
SLC52A1-204ENST00000573674 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.39■□□□□ 0.85
SLC52A1-204ENST00000573674 CCDC18Q5T9S5 1454 aa20.39■□□□□ 0.85
SLC52A1-204ENST00000573674 KIAA0556O60303 1618 aa20.38■□□□□ 0.85
SLC52A1-204ENST00000573674 MYOM3Q5VTT5 1437 aa20.37■□□□□ 0.85
SLC52A1-204ENST00000573674 CEP170Q5SW79 1584 aa20.37■□□□□ 0.85
SLC52A1-204ENST00000573674 SUPT6HQ7KZ85 1726 aaKnown RBP20.37■□□□□ 0.85
SLC52A1-204ENST00000573674 PTPRKQ15262 1439 aa20.35■□□□□ 0.85
SLC52A1-204ENST00000573674 ARHGEF11O15085 1522 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms