RNA–Protein interactions for RNA: ENST00000573023.6

SLC12A4-212, Transcript of solute carrier family 12 member 4, humanhuman

TSL 5

Gene SLC12A4, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-212ENST00000573023 ARHGAP35Q9NRY4 1499 aa26.7■■□□□ 1.86
SLC12A4-212ENST00000573023 TDRD9Q8NDG6 1382 aaKnown RBP26.69■■□□□ 1.86
SLC12A4-212ENST00000573023 FGD5Q6ZNL6 1462 aa26.69■■□□□ 1.86
SLC12A4-212ENST00000573023 FHOD3Q2V2M9 1422 aa26.67■■□□□ 1.86
SLC12A4-212ENST00000573023 ERICH3Q5RHP9 1530 aa26.67■■□□□ 1.86
SLC12A4-212ENST00000573023 ANP32CO43423 234 aa26.65■■□□□ 1.86
SLC12A4-212ENST00000573023 FBLN2P98095 1184 aa26.64■■□□□ 1.86
SLC12A4-212ENST00000573023 RRP7BPQ9NSQ0 103 aa26.64■■□□□ 1.86
SLC12A4-212ENST00000573023 FHAD1B1AJZ9 1412 aa26.64■■□□□ 1.86
SLC12A4-212ENST00000573023 HMGXB3Q12766 1538 aa26.64■■□□□ 1.86
SLC12A4-212ENST00000573023 TONSLQ96HA7 1378 aa26.64■■□□□ 1.85
SLC12A4-212ENST00000573023 POLR3GLQ9BT43 218 aa26.62■■□□□ 1.85
SLC12A4-212ENST00000573023 RAD54L2Q9Y4B4 1467 aa26.62■■□□□ 1.85
SLC12A4-212ENST00000573023 SETD5Q9C0A6 1442 aa26.61■■□□□ 1.85
SLC12A4-212ENST00000573023 FANCD2Q9BXW9 1451 aa26.61■■□□□ 1.85
SLC12A4-212ENST00000573023 KCNH8Q96L42 1107 aa26.56■■□□□ 1.84
SLC12A4-212ENST00000573023 PHLDB1Q86UU1 1377 aa26.54■■□□□ 1.84
SLC12A4-212ENST00000573023 RRBP1Q9P2E9 1410 aaKnown RBP26.5■■□□□ 1.83
SLC12A4-212ENST00000573023 NESP48681 1621 aa26.47■■□□□ 1.83
SLC12A4-212ENST00000573023 BIVM-ERCC5R4GMW8 1640 aa26.47■■□□□ 1.83
SLC12A4-212ENST00000573023 ZNF777Q9ULD5 760 aaPredicted RBP26.45■■□□□ 1.83
SLC12A4-212ENST00000573023 FKBP8Q14318 412 aa26.45■■□□□ 1.82
SLC12A4-212ENST00000573023 ZNF326Q5BKZ1 582 aaKnown RBP26.44■■□□□ 1.82
SLC12A4-212ENST00000573023 DNAJC5BQ9UF47 199 aa26.41■■□□□ 1.82
SLC12A4-212ENST00000573023 LRRC9Q6ZRR7 1453 aa26.39■■□□□ 1.82
SLC12A4-212ENST00000573023 SUPT16HQ9Y5B9 1047 aaKnown RBP26.38■■□□□ 1.81
SLC12A4-212ENST00000573023 PPP1R15AO75807 674 aaPredicted RBP26.34■■□□□ 1.81
SLC12A4-212ENST00000573023 CC2D2AQ9P2K1 1620 aa26.32■■□□□ 1.8
SLC12A4-212ENST00000573023 FMN1Q68DA7 1419 aa26.31■■□□□ 1.8
SLC12A4-212ENST00000573023 FOXD1Q16676 465 aa26.29■■□□□ 1.8
SLC12A4-212ENST00000573023 HNRNPUQ00839 825 aaKnown RBP eCLIP26.27■■□□□ 1.8
SLC12A4-212ENST00000573023 POLA1P09884 1462 aaPredicted RBP26.26■■□□□ 1.79
SLC12A4-212ENST00000573023 CDK11AQ9UQ88 783 aaPredicted RBP26.25■■□□□ 1.79
SLC12A4-212ENST00000573023 PDS5BQ9NTI5 1447 aa26.24■■□□□ 1.79
SLC12A4-212ENST00000573023 TIAM1Q13009 1591 aa26.23■■□□□ 1.79
SLC12A4-212ENST00000573023 TIMELESSQ9UNS1 1208 aa26.22■■□□□ 1.79
SLC12A4-212ENST00000573023 TOPBP1Q92547 1522 aa26.21■■□□□ 1.79
SLC12A4-212ENST00000573023 CHMP7Q8WUX9 453 aaPredicted RBP26.19■■□□□ 1.78
SLC12A4-212ENST00000573023 SLC4A1APQ9BWU0 796 aaKnown RBP26.18■■□□□ 1.78
SLC12A4-212ENST00000573023 FAM9BQ8IZU0 186 aa26.16■■□□□ 1.78
SLC12A4-212ENST00000573023 IRX6P78412 446 aaPredicted RBP26.15■■□□□ 1.78
SLC12A4-212ENST00000573023 EIF4G2P78344 907 aaKnown RBP eCLIP26.15■■□□□ 1.789e-7■■■■■ 27.1
SLC12A4-212ENST00000573023 GAPVD1Q14C86 1478 aa26.15■■□□□ 1.78
SLC12A4-212ENST00000573023 FGD6Q6ZV73 1430 aa26.13■■□□□ 1.77
SLC12A4-212ENST00000573023 CASKIN1Q8WXD9 1431 aa26.12■■□□□ 1.77
SLC12A4-212ENST00000573023 HSPA5P11021 654 aaKnown RBP26.06■■□□□ 1.76
SLC12A4-212ENST00000573023 PCF11O94913 1555 aaKnown RBP26.05■■□□□ 1.76
SLC12A4-212ENST00000573023 CFDP1Q9UEE9 299 aaPredicted RBP26.05■■□□□ 1.76
SLC12A4-212ENST00000573023 CCDC18Q5T9S5 1454 aa26.05■■□□□ 1.76
SLC12A4-212ENST00000573023 MPHOSPH9Q99550 1183 aa26.05■■□□□ 1.76
SLC12A4-212ENST00000573023 SENP3-EIF4A1A0A087X0R7 540 aa26.04■■□□□ 1.76
SLC12A4-212ENST00000573023 ABCA10Q8WWZ4 1543 aa26.04■■□□□ 1.76
SLC12A4-212ENST00000573023 AQRO60306 1485 aaKnown RBP eCLIP26.03■■□□□ 1.762e-7■■■■■ 37.1
SLC12A4-212ENST00000573023 MYT1Q01538 1121 aa26.03■■□□□ 1.76
SLC12A4-212ENST00000573023 DNMBPQ6XZF7 1577 aa26.02■■□□□ 1.76
SLC12A4-212ENST00000573023 FYCO1Q9BQS8 1478 aa26.02■■□□□ 1.76
SLC12A4-212ENST00000573023 WDR97A6NE52 1622 aa26.01■■□□□ 1.75
SLC12A4-212ENST00000573023 MRS2Q9HD23 443 aa26■■□□□ 1.75
SLC12A4-212ENST00000573023 L3MBTL2Q969R5 705 aa25.99■■□□□ 1.75
SLC12A4-212ENST00000573023 KDM2AQ9Y2K7 1162 aa25.99■■□□□ 1.75
SLC12A4-212ENST00000573023 NCOA2Q15596 1464 aa25.97■■□□□ 1.75
SLC12A4-212ENST00000573023 ERICH6Q7L0X2 663 aa25.96■■□□□ 1.75
SLC12A4-212ENST00000573023 CCER2I3L3R5 266 aa25.96■■□□□ 1.75
SLC12A4-212ENST00000573023 ZNF644Q9H582 1327 aaPredicted RBP25.95■■□□□ 1.75
SLC12A4-212ENST00000573023 MYOM3Q5VTT5 1437 aa25.95■■□□□ 1.74
SLC12A4-212ENST00000573023 MAPKBP1O60336 1514 aa25.94■■□□□ 1.74
SLC12A4-212ENST00000573023 MAP3K1Q13233 1512 aa25.92■■□□□ 1.74
SLC12A4-212ENST00000573023 URB2Q14146 1524 aaKnown RBP25.91■■□□□ 1.74
SLC12A4-212ENST00000573023 MYT1LQ9UL68 1186 aa25.89■■□□□ 1.74
SLC12A4-212ENST00000573023 UACAQ9BZF9 1416 aa25.89■■□□□ 1.73
SLC12A4-212ENST00000573023 EFCAB5A4FU69 1503 aa25.88■■□□□ 1.73
SLC12A4-212ENST00000573023 PLEKHD1A6NEE1 506 aa25.88■■□□□ 1.73
SLC12A4-212ENST00000573023 TSPY4P0CV99 314 aa25.88■■□□□ 1.73
SLC12A4-212ENST00000573023 TSPY10P0CW01 314 aa25.88■■□□□ 1.73
SLC12A4-212ENST00000573023 TSHZ2Q9NRE2 1034 aa25.85■■□□□ 1.73
SLC12A4-212ENST00000573023 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.84■■□□□ 1.732e-8■■□□□ 13.9
SLC12A4-212ENST00000573023 PTPRKQ15262 1439 aa25.83■■□□□ 1.73
SLC12A4-212ENST00000573023 ERCC6Q03468 1493 aa25.81■■□□□ 1.72
SLC12A4-212ENST00000573023 HFM1A2PYH4 1435 aa25.8■■□□□ 1.72
SLC12A4-212ENST00000573023 NAIPQ13075 1403 aa25.79■■□□□ 1.72
SLC12A4-212ENST00000573023 PKD2Q13563 968 aa25.77■■□□□ 1.72
SLC12A4-212ENST00000573023 SALL2Q9Y467 1007 aaPredicted RBP25.77■■□□□ 1.72
SLC12A4-212ENST00000573023 RGL3Q3MIN7 710 aa25.75■■□□□ 1.71
SLC12A4-212ENST00000573023 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.75■■□□□ 1.71
SLC12A4-212ENST00000573023 WASHC2AQ641Q2 1341 aa25.72■■□□□ 1.71
SLC12A4-212ENST00000573023 JPH4Q96JJ6 628 aa25.71■■□□□ 1.71
SLC12A4-212ENST00000573023 TMC1Q8TDI8 760 aa25.69■■□□□ 1.7
SLC12A4-212ENST00000573023 CUL7Q14999 1698 aa25.68■■□□□ 1.7
SLC12A4-212ENST00000573023 CDK13Q14004 1512 aaKnown RBP25.68■■□□□ 1.7
SLC12A4-212ENST00000573023 CARD11Q9BXL7 1154 aa25.67■■□□□ 1.7
SLC12A4-212ENST00000573023 LAMC3Q9Y6N6 1575 aa25.67■■□□□ 1.7
SLC12A4-212ENST00000573023 NBPF8Q3BBV2 869 aa25.62■■□□□ 1.69
SLC12A4-212ENST00000573023 DCAF11Q8TEB1 546 aa25.62■■□□□ 1.69
SLC12A4-212ENST00000573023 SNAPC4Q5SXM2 1469 aa25.61■■□□□ 1.69
SLC12A4-212ENST00000573023 HNRNPMP52272 730 aaKnown RBP eCLIP25.61■■□□□ 1.69
SLC12A4-212ENST00000573023 GRIN2BQ13224 1484 aa25.61■■□□□ 1.69
SLC12A4-212ENST00000573023 CCDC184Q52MB2 194 aa25.6■■□□□ 1.69
SLC12A4-212ENST00000573023 EHBP1L1Q8N3D4 1523 aa25.6■■□□□ 1.69
SLC12A4-212ENST00000573023 EPRSP07814 1512 aaKnown RBP25.59■■□□□ 1.69
SLC12A4-212ENST00000573023 PRKRIP1Q9H875 184 aaPredicted RBP25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms