RNA–Protein interactions for RNA: ENST00000572705.1

TRPV1-207, Transcript of transient receptor potential cation channel subfamily V member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPV1, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1-207ENST00000572705 IGF1RP08069 1367 aa14.01□□□□□ -0.17
TRPV1-207ENST00000572705 FHAD1B1AJZ9 1412 aa14.01□□□□□ -0.17
TRPV1-207ENST00000572705 FANCD2Q9BXW9 1451 aa14□□□□□ -0.17
TRPV1-207ENST00000572705 CFTRP13569 1480 aa13.98□□□□□ -0.17
TRPV1-207ENST00000572705 PDS5BQ9NTI5 1447 aa13.97□□□□□ -0.17
TRPV1-207ENST00000572705 FGD5Q6ZNL6 1462 aa13.96□□□□□ -0.17
TRPV1-207ENST00000572705 FHOD3Q2V2M9 1422 aa13.95□□□□□ -0.18
TRPV1-207ENST00000572705 BCANQ96GW7 911 aa13.95□□□□□ -0.18
TRPV1-207ENST00000572705 CLSPNQ9HAW4 1339 aa13.94□□□□□ -0.18
TRPV1-207ENST00000572705 RAD54L2Q9Y4B4 1467 aa13.94□□□□□ -0.18
TRPV1-207ENST00000572705 KIF21BO75037 1637 aa13.93□□□□□ -0.18
TRPV1-207ENST00000572705 CUX1P39880 1505 aa13.91□□□□□ -0.18
TRPV1-207ENST00000572705 PEG3Q9GZU2 1588 aa13.9□□□□□ -0.18
TRPV1-207ENST00000572705 RAB3GAP2Q9H2M9 1393 aa13.9□□□□□ -0.18
TRPV1-207ENST00000572705 HMGXB3Q12766 1538 aa13.89□□□□□ -0.19
TRPV1-207ENST00000572705 TOP2BQ02880 1626 aa13.89□□□□□ -0.19
TRPV1-207ENST00000572705 ERCC6Q03468 1493 aa13.89□□□□□ -0.19
TRPV1-207ENST00000572705 PRXQ9BXM0 1461 aa13.88□□□□□ -0.19
TRPV1-207ENST00000572705 NESP48681 1621 aa13.88□□□□□ -0.19
TRPV1-207ENST00000572705 ARAP1Q96P48 1450 aa13.87□□□□□ -0.19
TRPV1-207ENST00000572705 DNAJC5BQ9UF47 199 aa13.87□□□□□ -0.19
TRPV1-207ENST00000572705 SETD5Q9C0A6 1442 aa13.87□□□□□ -0.19
TRPV1-207ENST00000572705 SLC4A1APQ9BWU0 796 aaKnown RBP13.86□□□□□ -0.19
TRPV1-207ENST00000572705 CFDP1Q9UEE9 299 aaPredicted RBP13.85□□□□□ -0.19
TRPV1-207ENST00000572705 DHX57Q6P158 1386 aaKnown RBP13.84□□□□□ -0.19
TRPV1-207ENST00000572705 ARHGAP35Q9NRY4 1499 aa13.84□□□□□ -0.19
TRPV1-207ENST00000572705 PLEKHD1A6NEE1 506 aa13.84□□□□□ -0.19
TRPV1-207ENST00000572705 TSPY4P0CV99 314 aa13.84□□□□□ -0.19
TRPV1-207ENST00000572705 TSPY10P0CW01 314 aa13.84□□□□□ -0.19
TRPV1-207ENST00000572705 FMN1Q68DA7 1419 aa13.84□□□□□ -0.19
TRPV1-207ENST00000572705 CC2D2AQ9P2K1 1620 aa13.82□□□□□ -0.2
TRPV1-207ENST00000572705 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.81□□□□□ -0.21e-6■■□□□ 14.1
TRPV1-207ENST00000572705 KCNH8Q96L42 1107 aa13.79□□□□□ -0.2
TRPV1-207ENST00000572705 ERICH3Q5RHP9 1530 aa13.79□□□□□ -0.2
TRPV1-207ENST00000572705 KDM2AQ9Y2K7 1162 aa13.79□□□□□ -0.2
TRPV1-207ENST00000572705 HNRNPUQ00839 825 aaKnown RBP eCLIP13.76□□□□□ -0.21
TRPV1-207ENST00000572705 FOXD1Q16676 465 aa13.76□□□□□ -0.21
TRPV1-207ENST00000572705 EIF4G2P78344 907 aaKnown RBP eCLIP13.76□□□□□ -0.21
TRPV1-207ENST00000572705 GAPVD1Q14C86 1478 aa13.76□□□□□ -0.21
TRPV1-207ENST00000572705 PHLDB1Q86UU1 1377 aa13.75□□□□□ -0.21
TRPV1-207ENST00000572705 ERICH6Q7L0X2 663 aa13.75□□□□□ -0.21
TRPV1-207ENST00000572705 FKBP8Q14318 412 aa13.74□□□□□ -0.21
TRPV1-207ENST00000572705 FAM9BQ8IZU0 186 aa13.74□□□□□ -0.21
TRPV1-207ENST00000572705 POLA1P09884 1462 aaPredicted RBP13.72□□□□□ -0.21
TRPV1-207ENST00000572705 AQRO60306 1485 aaKnown RBP eCLIP13.71□□□□□ -0.211e-6■■■□□ 17.3
TRPV1-207ENST00000572705 TOPBP1Q92547 1522 aa13.71□□□□□ -0.21
TRPV1-207ENST00000572705 PPP1R15AO75807 674 aaPredicted RBP13.69□□□□□ -0.22
TRPV1-207ENST00000572705 TIMELESSQ9UNS1 1208 aa13.69□□□□□ -0.22
TRPV1-207ENST00000572705 LRRC9Q6ZRR7 1453 aa13.68□□□□□ -0.22
TRPV1-207ENST00000572705 RGL3Q3MIN7 710 aa13.68□□□□□ -0.22
TRPV1-207ENST00000572705 JPH4Q96JJ6 628 aa13.67□□□□□ -0.22
TRPV1-207ENST00000572705 MRS2Q9HD23 443 aa13.66□□□□□ -0.22
TRPV1-207ENST00000572705 MPHOSPH9Q99550 1183 aa13.65□□□□□ -0.22
TRPV1-207ENST00000572705 RRBP1Q9P2E9 1410 aaKnown RBP13.65□□□□□ -0.22
TRPV1-207ENST00000572705 SENP3-EIF4A1A0A087X0R7 540 aa13.62□□□□□ -0.23
TRPV1-207ENST00000572705 NPM1P06748 294 aaKnown RBP eCLIP13.61□□□□□ -0.23
TRPV1-207ENST00000572705 BIVM-ERCC5R4GMW8 1640 aa13.6□□□□□ -0.23
TRPV1-207ENST00000572705 CHGAP10645 457 aaKnown RBP13.6□□□□□ -0.23
TRPV1-207ENST00000572705 CARMIL2Q6F5E8 1435 aa13.6□□□□□ -0.23
TRPV1-207ENST00000572705 CASKIN1Q8WXD9 1431 aa13.6□□□□□ -0.23
TRPV1-207ENST00000572705 SALL2Q9Y467 1007 aaPredicted RBP13.6□□□□□ -0.23
TRPV1-207ENST00000572705 FGD6Q6ZV73 1430 aa13.6□□□□□ -0.23
TRPV1-207ENST00000572705 HSPA5P11021 654 aaKnown RBP13.6□□□□□ -0.23
TRPV1-207ENST00000572705 IRX6P78412 446 aaPredicted RBP13.6□□□□□ -0.23
TRPV1-207ENST00000572705 DNMBPQ6XZF7 1577 aa13.59□□□□□ -0.23
TRPV1-207ENST00000572705 PKD2Q13563 968 aa13.59□□□□□ -0.23
TRPV1-207ENST00000572705 L3MBTL2Q969R5 705 aa13.59□□□□□ -0.23
TRPV1-207ENST00000572705 ZNF644Q9H582 1327 aaPredicted RBP13.59□□□□□ -0.23
TRPV1-207ENST00000572705 TMC1Q8TDI8 760 aa13.57□□□□□ -0.24
TRPV1-207ENST00000572705 ABCA10Q8WWZ4 1543 aa13.57□□□□□ -0.24
TRPV1-207ENST00000572705 CARD11Q9BXL7 1154 aa13.56□□□□□ -0.24
TRPV1-207ENST00000572705 HNRNPMP52272 730 aaKnown RBP eCLIP13.55□□□□□ -0.241e-12■■■■□ 21.2
TRPV1-207ENST00000572705 CCDC18Q5T9S5 1454 aa13.54□□□□□ -0.24
TRPV1-207ENST00000572705 MYOM3Q5VTT5 1437 aa13.54□□□□□ -0.24
TRPV1-207ENST00000572705 TIAM1Q13009 1591 aa13.54□□□□□ -0.24
TRPV1-207ENST00000572705 DCAF11Q8TEB1 546 aa13.53□□□□□ -0.24
TRPV1-207ENST00000572705 NCOA2Q15596 1464 aa13.53□□□□□ -0.24
TRPV1-207ENST00000572705 FYCO1Q9BQS8 1478 aa13.53□□□□□ -0.24
TRPV1-207ENST00000572705 URB2Q14146 1524 aaKnown RBP13.51□□□□□ -0.25
TRPV1-207ENST00000572705 GRIN2BQ13224 1484 aa13.51□□□□□ -0.25
TRPV1-207ENST00000572705 NUP155O75694 1391 aa13.5□□□□□ -0.25
TRPV1-207ENST00000572705 SUPT16HQ9Y5B9 1047 aaKnown RBP13.5□□□□□ -0.25
TRPV1-207ENST00000572705 SENP3Q9H4L4 574 aaPredicted RBP13.49□□□□□ -0.25
TRPV1-207ENST00000572705 EFCAB5A4FU69 1503 aa13.47□□□□□ -0.25
TRPV1-207ENST00000572705 MRC2Q9UBG0 1479 aa13.47□□□□□ -0.25
TRPV1-207ENST00000572705 ANKRD30AQ9BXX3 1397 aa13.47□□□□□ -0.25
TRPV1-207ENST00000572705 LAMC3Q9Y6N6 1575 aa13.47□□□□□ -0.25
TRPV1-207ENST00000572705 CCER2I3L3R5 266 aa13.46□□□□□ -0.25
TRPV1-207ENST00000572705 PCF11O94913 1555 aaKnown RBP13.45□□□□□ -0.26
TRPV1-207ENST00000572705 UACAQ9BZF9 1416 aa13.45□□□□□ -0.26
TRPV1-207ENST00000572705 PTPRGP23470 1445 aa13.44□□□□□ -0.26
TRPV1-207ENST00000572705 IFT140Q96RY7 1462 aa13.4□□□□□ -0.26
TRPV1-207ENST00000572705 SNAPC4Q5SXM2 1469 aa13.39□□□□□ -0.27
TRPV1-207ENST00000572705 EFCAB2Q5VUJ9 269 aa13.39□□□□□ -0.27
TRPV1-207ENST00000572705 ZNF608Q9ULD9 1512 aaPredicted RBP13.38□□□□□ -0.27
TRPV1-207ENST00000572705 PRDM2Q13029 1718 aa13.38□□□□□ -0.27
TRPV1-207ENST00000572705 CDK13Q14004 1512 aaKnown RBP13.37□□□□□ -0.27
TRPV1-207ENST00000572705 HFM1A2PYH4 1435 aa13.37□□□□□ -0.27
TRPV1-207ENST00000572705 PRG4Q92954 1404 aaPredicted RBP13.37□□□□□ -0.27
TRPV1-207ENST00000572705 STAG3Q9UJ98 1225 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms