RNA–Protein interactions for RNA: ENST00000572102.5

TVP23A-204, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 5

Gene TVP23A, Length 2,987 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-204ENST00000572102 P3H3Q8IVL6 736 aa14.75□□□□□ -0.05
TVP23A-204ENST00000572102 KANK4Q5T7N3 995 aaPredicted RBP14.74□□□□□ -0.05
TVP23A-204ENST00000572102 VPS8Q8N3P4 1428 aa14.74□□□□□ -0.05
TVP23A-204ENST00000572102 DNMBPQ6XZF7 1577 aa14.74□□□□□ -0.05
TVP23A-204ENST00000572102 TOPBP1Q92547 1522 aa14.73□□□□□ -0.05
TVP23A-204ENST00000572102 PRXQ9BXM0 1461 aa14.73□□□□□ -0.05
TVP23A-204ENST00000572102 ERCC6Q03468 1493 aa14.71□□□□□ -0.05
TVP23A-204ENST00000572102 ATP1B4Q9UN42 357 aaPredicted RBP14.7□□□□□ -0.06
TVP23A-204ENST00000572102 FGD5Q6ZNL6 1462 aa14.69□□□□□ -0.06
TVP23A-204ENST00000572102 MRC2Q9UBG0 1479 aa14.69□□□□□ -0.06
TVP23A-204ENST00000572102 THOC2Q8NI27 1593 aaKnown RBP14.69□□□□□ -0.06
TVP23A-204ENST00000572102 IGF1RP08069 1367 aa14.68□□□□□ -0.06
TVP23A-204ENST00000572102 ITGAEP38570 1179 aa14.68□□□□□ -0.06
TVP23A-204ENST00000572102 ERICH3Q5RHP9 1530 aa14.67□□□□□ -0.06
TVP23A-204ENST00000572102 RAD54L2Q9Y4B4 1467 aa14.67□□□□□ -0.06
TVP23A-204ENST00000572102 ARAP1Q96P48 1450 aa14.66□□□□□ -0.06
TVP23A-204ENST00000572102 POLA1P09884 1462 aaPredicted RBP14.66□□□□□ -0.06
TVP23A-204ENST00000572102 PDIA4P13667 645 aaKnown RBP14.65□□□□□ -0.06
TVP23A-204ENST00000572102 WDR62O43379 1518 aa14.65□□□□□ -0.06
TVP23A-204ENST00000572102 NPM2Q86SE8 214 aaKnown RBP14.64□□□□□ -0.07
TVP23A-204ENST00000572102 CARMIL1Q5VZK9 1371 aa14.63□□□□□ -0.07
TVP23A-204ENST00000572102 C14orf37Q86TY3 774 aa14.59□□□□□ -0.07
TVP23A-204ENST00000572102 UBE2Q2Q8WVN8 375 aa14.58□□□□□ -0.08
TVP23A-204ENST00000572102 ARHGAP35Q9NRY4 1499 aa14.57□□□□□ -0.08
TVP23A-204ENST00000572102 WDR97A6NE52 1622 aa14.57□□□□□ -0.08
TVP23A-204ENST00000572102 HAP1P54257 671 aaPredicted RBP14.57□□□□□ -0.08
TVP23A-204ENST00000572102 TDRD9Q8NDG6 1382 aaKnown RBP14.56□□□□□ -0.08
TVP23A-204ENST00000572102 TARBP1Q13395 1621 aaKnown RBP14.55□□□□□ -0.08
TVP23A-204ENST00000572102 ABCA10Q8WWZ4 1543 aa14.54□□□□□ -0.08
TVP23A-204ENST00000572102 SCAF1Q9H7N4 1312 aaKnown RBP14.53□□□□□ -0.08
TVP23A-204ENST00000572102 DIEXFQ68CQ4 756 aaKnown RBP14.51□□□□□ -0.09
TVP23A-204ENST00000572102 ANO8Q9HCE9 1232 aaPredicted RBP14.51□□□□□ -0.09
TVP23A-204ENST00000572102 DHX37Q8IY37 1157 aaKnown RBP14.5□□□□□ -0.09
TVP23A-204ENST00000572102 GTF3C3Q9Y5Q9 886 aa14.48□□□□□ -0.09
TVP23A-204ENST00000572102 ABCA5Q8WWZ7 1642 aa14.48□□□□□ -0.09
TVP23A-204ENST00000572102 PDE4CQ08493 712 aa14.47□□□□□ -0.09
TVP23A-204ENST00000572102 IFT140Q96RY7 1462 aa14.46□□□□□ -0.09
TVP23A-204ENST00000572102 ZNF608Q9ULD9 1512 aaPredicted RBP14.46□□□□□ -0.09
TVP23A-204ENST00000572102 FHOD3Q2V2M9 1422 aa14.46□□□□□ -0.1
TVP23A-204ENST00000572102 FAM50AQ14320 339 aaKnown RBP14.45□□□□□ -0.1
TVP23A-204ENST00000572102 PKNOX2Q96KN3 472 aa14.45□□□□□ -0.1
TVP23A-204ENST00000572102 CHMP4AQ9BY43 222 aa14.45□□□□□ -0.1
TVP23A-204ENST00000572102 ARID3CA6NKF2 412 aa14.43□□□□□ -0.1
TVP23A-204ENST00000572102 AQRO60306 1485 aaKnown RBP eCLIP14.42□□□□□ -0.1
TVP23A-204ENST00000572102 EIF4G3O43432 1585 aaKnown RBP14.41□□□□□ -0.1
TVP23A-204ENST00000572102 GAPVD1Q14C86 1478 aa14.41□□□□□ -0.1
TVP23A-204ENST00000572102 ZNF316A6NFI3 1004 aaPredicted RBP14.4□□□□□ -0.1
TVP23A-204ENST00000572102 PBRM1Q86U86 1689 aa14.39□□□□□ -0.11
TVP23A-204ENST00000572102 CCNB3Q8WWL7 1395 aa14.39□□□□□ -0.11
TVP23A-204ENST00000572102 PHLDB1Q86UU1 1377 aa14.35□□□□□ -0.11
TVP23A-204ENST00000572102 YTHDC1Q96MU7 727 aaKnown RBP14.35□□□□□ -0.11
TVP23A-204ENST00000572102 CLSPNQ9HAW4 1339 aa14.35□□□□□ -0.11
TVP23A-204ENST00000572102 RRBP1Q9P2E9 1410 aaKnown RBP14.35□□□□□ -0.11
TVP23A-204ENST00000572102 BCL11BQ9C0K0 894 aaPredicted RBP14.34□□□□□ -0.11
TVP23A-204ENST00000572102 DHX57Q6P158 1386 aaKnown RBP14.34□□□□□ -0.11
TVP23A-204ENST00000572102 BCANQ96GW7 911 aa14.34□□□□□ -0.11
TVP23A-204ENST00000572102 CUL7Q14999 1698 aa14.32□□□□□ -0.12
TVP23A-204ENST00000572102 MAP3K1Q13233 1512 aa14.32□□□□□ -0.12
TVP23A-204ENST00000572102 GRIN2BQ13224 1484 aa14.32□□□□□ -0.12
TVP23A-204ENST00000572102 PCF11O94913 1555 aaKnown RBP14.3□□□□□ -0.12
TVP23A-204ENST00000572102 ADAMTS12P58397 1594 aa14.3□□□□□ -0.12
TVP23A-204ENST00000572102 LRRC9Q6ZRR7 1453 aa14.3□□□□□ -0.12
TVP23A-204ENST00000572102 TIAM1Q13009 1591 aa14.29□□□□□ -0.12
TVP23A-204ENST00000572102 SNAPC4Q5SXM2 1469 aa14.29□□□□□ -0.12
TVP23A-204ENST00000572102 NEUROD1Q13562 356 aa14.28□□□□□ -0.12
TVP23A-204ENST00000572102 SAMD1Q6SPF0 538 aaPredicted RBP14.28□□□□□ -0.12
TVP23A-204ENST00000572102 MIER1Q8N108 512 aa14.28□□□□□ -0.12
TVP23A-204ENST00000572102 FHAD1B1AJZ9 1412 aa14.27□□□□□ -0.12
TVP23A-204ENST00000572102 RAB3GAP2Q9H2M9 1393 aa14.27□□□□□ -0.12
TVP23A-204ENST00000572102 SIN3AQ96ST3 1273 aa14.25□□□□□ -0.13
TVP23A-204ENST00000572102 FBLN2P98095 1184 aa14.25□□□□□ -0.13
TVP23A-204ENST00000572102 MTUS2Q5JR59 1369 aa14.22□□□□□ -0.13
TVP23A-204ENST00000572102 ACIN1Q9UKV3 1341 aaKnown RBP14.22□□□□□ -0.13
TVP23A-204ENST00000572102 MAGI1Q96QZ7 1491 aaPredicted RBP14.21□□□□□ -0.13
TVP23A-204ENST00000572102 CENPBP07199 599 aaPredicted RBP14.21□□□□□ -0.13
TVP23A-204ENST00000572102 CHIC2Q9UKJ5 165 aa14.19□□□□□ -0.14
TVP23A-204ENST00000572102 EFCAB5A4FU69 1503 aa14.19□□□□□ -0.14
TVP23A-204ENST00000572102 CASKIN1Q8WXD9 1431 aa14.19□□□□□ -0.14
TVP23A-204ENST00000572102 PPP6R1Q9UPN7 881 aa14.18□□□□□ -0.14
TVP23A-204ENST00000572102 SYNJ2O15056 1496 aa14.17□□□□□ -0.14
TVP23A-204ENST00000572102 HIRIP3Q9BW71 556 aaPredicted RBP14.17□□□□□ -0.14
TVP23A-204ENST00000572102 CTTNBP2Q8WZ74 1663 aa14.17□□□□□ -0.14
TVP23A-204ENST00000572102 GRIN2AQ12879 1464 aa14.17□□□□□ -0.14
TVP23A-204ENST00000572102 FMN1Q68DA7 1419 aa14.16□□□□□ -0.14
TVP23A-204ENST00000572102 CCDC136Q96JN2 1154 aa14.16□□□□□ -0.14
TVP23A-204ENST00000572102 SETD5Q9C0A6 1442 aa14.16□□□□□ -0.14
TVP23A-204ENST00000572102 FYCO1Q9BQS8 1478 aa14.15□□□□□ -0.14
TVP23A-204ENST00000572102 CHD1O14646 1710 aa14.14□□□□□ -0.15
TVP23A-204ENST00000572102 CFAP43Q8NDM7 1665 aa14.14□□□□□ -0.15
TVP23A-204ENST00000572102 NEFLP07196 543 aa14.14□□□□□ -0.15
TVP23A-204ENST00000572102 TMEM132AQ24JP5 1023 aa14.13□□□□□ -0.15
TVP23A-204ENST00000572102 RRP7BPQ9NSQ0 103 aa14.13□□□□□ -0.15
TVP23A-204ENST00000572102 CEP170Q5SW79 1584 aa14.13□□□□□ -0.15
TVP23A-204ENST00000572102 CHMP7Q8WUX9 453 aaPredicted RBP14.11□□□□□ -0.15
TVP23A-204ENST00000572102 PTPRKQ15262 1439 aa14.1□□□□□ -0.15
TVP23A-204ENST00000572102 PLCB2Q00722 1185 aa14.09□□□□□ -0.15
TVP23A-204ENST00000572102 FGD6Q6ZV73 1430 aa14.09□□□□□ -0.15
TVP23A-204ENST00000572102 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.08□□□□□ -0.15
TVP23A-204ENST00000572102 MAPKBP1O60336 1514 aa14.08□□□□□ -0.16
TVP23A-204ENST00000572102 NUP160Q12769 1436 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms