RNA–Protein interactions for RNA: ENST00000572102.5

TVP23A-204, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 5

Gene TVP23A, Length 2,987 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-204ENST00000572102 NISCHQ9Y2I1 1504 aa20.5■□□□□ 0.87
TVP23A-204ENST00000572102 SLC24A1O60721 1099 aa18.15■□□□□ 0.5
TVP23A-204ENST00000572102 CCDC180Q9P1Z9 1646 aa17.96■□□□□ 0.47
TVP23A-204ENST00000572102 SHROOM4Q9ULL8 1493 aa17.74■□□□□ 0.43
TVP23A-204ENST00000572102 DCAF8L2P0C7V8 631 aa17.58■□□□□ 0.4
TVP23A-204ENST00000572102 SUPT5HO00267 1087 aaKnown RBP17.3■□□□□ 0.36
TVP23A-204ENST00000572102 ZCCHC6Q5VYS8 1495 aaKnown RBP17.23■□□□□ 0.35
TVP23A-204ENST00000572102 ABCC9O60706 1549 aa17.19■□□□□ 0.34
TVP23A-204ENST00000572102 PRKCSHP14314 528 aaPredicted RBP17.13■□□□□ 0.33
TVP23A-204ENST00000572102 DCAF1Q9Y4B6 1507 aa16.91■□□□□ 0.3
TVP23A-204ENST00000572102 MYT1Q01538 1121 aa16.78■□□□□ 0.28
TVP23A-204ENST00000572102 MYO15BQ96JP2 1530 aa16.77■□□□□ 0.28
TVP23A-204ENST00000572102 PELP1Q8IZL8 1130 aaKnown RBP16.77■□□□□ 0.27
TVP23A-204ENST00000572102 NACADO15069 1562 aa16.74■□□□□ 0.27
TVP23A-204ENST00000572102 RB1CC1Q8TDY2 1594 aa16.66■□□□□ 0.26
TVP23A-204ENST00000572102 DAXXQ9UER7 740 aaPredicted RBP16.65■□□□□ 0.26
TVP23A-204ENST00000572102 APLP2Q06481 763 aa16.6■□□□□ 0.25
TVP23A-204ENST00000572102 SCRIBQ14160 1630 aa16.54■□□□□ 0.24
TVP23A-204ENST00000572102 CHIC1Q5VXU3 224 aa16.52■□□□□ 0.23
TVP23A-204ENST00000572102 TTBK1Q5TCY1 1321 aaPredicted RBP16.49■□□□□ 0.23
TVP23A-204ENST00000572102 PLPPR3Q6T4P5 718 aa16.42■□□□□ 0.22
TVP23A-204ENST00000572102 UNC13AQ9UPW8 1703 aa16.41■□□□□ 0.22
TVP23A-204ENST00000572102 ERICH6Q7L0X2 663 aa16.34■□□□□ 0.21
TVP23A-204ENST00000572102 EHMT2Q96KQ7 1210 aa16.33■□□□□ 0.2
TVP23A-204ENST00000572102 BICRAQ9NZM4 1560 aa16.24■□□□□ 0.19
TVP23A-204ENST00000572102 RSF1Q96T23 1441 aaPredicted RBP16.21■□□□□ 0.19
TVP23A-204ENST00000572102 LOC105371045A0A1W2PR82 267 aa16.21■□□□□ 0.19
TVP23A-204ENST00000572102 CECR2Q9BXF3 1484 aa16.17■□□□□ 0.18
TVP23A-204ENST00000572102 PABPN1Q86U42 306 aaKnown RBP eCLIP16.16■□□□□ 0.18
TVP23A-204ENST00000572102 RTN4Q9NQC3 1192 aaKnown RBP16.11■□□□□ 0.17
TVP23A-204ENST00000572102 FAM9AQ8IZU1 332 aaPredicted RBP16.06■□□□□ 0.16
TVP23A-204ENST00000572102 MROH2BQ7Z745 1585 aa16.01■□□□□ 0.15
TVP23A-204ENST00000572102 TRIM41Q8WV44 630 aa15.99■□□□□ 0.15
TVP23A-204ENST00000572102 PCGF6Q9BYE7 350 aa15.93■□□□□ 0.14
TVP23A-204ENST00000572102 NCBP3Q53F19 620 aaKnown RBP15.91■□□□□ 0.14
TVP23A-204ENST00000572102 WIZO95785 1651 aa15.91■□□□□ 0.14
TVP23A-204ENST00000572102 BAZ1AQ9NRL2 1556 aaPredicted RBP15.82■□□□□ 0.12
TVP23A-204ENST00000572102 SMARCA4P51532 1647 aa15.82■□□□□ 0.12
TVP23A-204ENST00000572102 PLEKHG5O94827 1062 aa15.8■□□□□ 0.12
TVP23A-204ENST00000572102 EIF5BO60841 1220 aaKnown RBP15.79■□□□□ 0.12
TVP23A-204ENST00000572102 EIF4G1Q04637 1599 aaKnown RBP15.73■□□□□ 0.11
TVP23A-204ENST00000572102 TIMELESSQ9UNS1 1208 aa15.67■□□□□ 0.1
TVP23A-204ENST00000572102 BCL11AQ9H165 835 aa15.67■□□□□ 0.1
TVP23A-204ENST00000572102 PPARGC1BQ86YN6 1023 aaKnown RBP15.64■□□□□ 0.09
TVP23A-204ENST00000572102 PEG3Q9GZU2 1588 aa15.62■□□□□ 0.09
TVP23A-204ENST00000572102 HRCP23327 699 aa15.61■□□□□ 0.09
TVP23A-204ENST00000572102 KLHL34Q8N239 644 aa15.6■□□□□ 0.09
TVP23A-204ENST00000572102 CCDC88BA6NC98 1476 aa15.59■□□□□ 0.09
TVP23A-204ENST00000572102 ATAD2BQ9ULI0 1458 aa15.59■□□□□ 0.09
TVP23A-204ENST00000572102 ABCC8Q09428 1581 aa15.56■□□□□ 0.08
TVP23A-204ENST00000572102 CC2D2AQ9P2K1 1620 aa15.56■□□□□ 0.08
TVP23A-204ENST00000572102 SMARCA2P51531 1590 aa15.54■□□□□ 0.08
TVP23A-204ENST00000572102 TOP2AP11388 1531 aaKnown RBP15.53■□□□□ 0.08
TVP23A-204ENST00000572102 TRIM26Q12899 539 aaPredicted RBP15.48■□□□□ 0.07
TVP23A-204ENST00000572102 BAZ1BQ9UIG0 1483 aaKnown RBP15.47■□□□□ 0.07
TVP23A-204ENST00000572102 NCAPD3P42695 1498 aa15.46■□□□□ 0.07
TVP23A-204ENST00000572102 HMGXB3Q12766 1538 aa15.44■□□□□ 0.06
TVP23A-204ENST00000572102 SOGA1O94964 1423 aa15.4■□□□□ 0.06
TVP23A-204ENST00000572102 DNAJC5BQ9UF47 199 aa15.38■□□□□ 0.05
TVP23A-204ENST00000572102 RUSC2Q8N2Y8 1516 aa15.36■□□□□ 0.05
TVP23A-204ENST00000572102 AEBP2Q6ZN18 517 aaPredicted RBP15.35■□□□□ 0.05
TVP23A-204ENST00000572102 TULP1O00294 542 aaPredicted RBP15.33■□□□□ 0.05
TVP23A-204ENST00000572102 UBTFP17480 764 aaKnown RBP15.32■□□□□ 0.04
TVP23A-204ENST00000572102 RANGAP1P46060 587 aaPredicted RBP15.31■□□□□ 0.04
TVP23A-204ENST00000572102 ARXQ96QS3 562 aa15.3■□□□□ 0.04
TVP23A-204ENST00000572102 CSRNP3Q8WYN3 585 aa15.26■□□□□ 0.03
TVP23A-204ENST00000572102 WRNQ14191 1432 aaPredicted RBP eCLIP15.24■□□□□ 0.03
TVP23A-204ENST00000572102 KCNA4P22459 653 aa15.18■□□□□ 0.02
TVP23A-204ENST00000572102 SYNJ1O43426 1573 aa15.15■□□□□ 0.02
TVP23A-204ENST00000572102 EEA1Q15075 1411 aa15.14■□□□□ 0.01
TVP23A-204ENST00000572102 CEP162Q5TB80 1403 aa15.14■□□□□ 0.01
TVP23A-204ENST00000572102 ZEB1P37275 1124 aaPredicted RBP15.14■□□□□ 0.01
TVP23A-204ENST00000572102 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.12■□□□□ 0.01
TVP23A-204ENST00000572102 CFTRP13569 1480 aa15.08■□□□□ 0
TVP23A-204ENST00000572102 PODXL2Q9NZ53 605 aa15.07■□□□□ 0
TVP23A-204ENST00000572102 NESP48681 1621 aa15.06■□□□□ 0
TVP23A-204ENST00000572102 TNIKQ9UKE5 1360 aa15.05■□□□□ -0
TVP23A-204ENST00000572102 AMER1Q5JTC6 1135 aaPredicted RBP15.04■□□□□ -0
TVP23A-204ENST00000572102 CADPSQ9ULU8 1353 aa15.04■□□□□ -0
TVP23A-204ENST00000572102 PRDM2Q13029 1718 aa15.02□□□□□ -0.01
TVP23A-204ENST00000572102 GOLGA3Q08378 1498 aa15□□□□□ -0.01
TVP23A-204ENST00000572102 CCER1Q8TC90 406 aaPredicted RBP14.99□□□□□ -0.01
TVP23A-204ENST00000572102 RAPGEF2Q9Y4G8 1499 aa14.98□□□□□ -0.01
TVP23A-204ENST00000572102 LAMC3Q9Y6N6 1575 aa14.97□□□□□ -0.01
TVP23A-204ENST00000572102 CEP164Q9UPV0 1460 aa14.92□□□□□ -0.02
TVP23A-204ENST00000572102 HNRNPUL2Q1KMD3 747 aaKnown RBP14.91□□□□□ -0.02
TVP23A-204ENST00000572102 TAOK2Q9UL54 1235 aa14.91□□□□□ -0.02
TVP23A-204ENST00000572102 CLIP1P30622 1438 aa14.91□□□□□ -0.02
TVP23A-204ENST00000572102 FANCD2Q9BXW9 1451 aa14.9□□□□□ -0.02
TVP23A-204ENST00000572102 CUX1P39880 1505 aa14.89□□□□□ -0.03
TVP23A-204ENST00000572102 KIF21AQ7Z4S6 1674 aa14.88□□□□□ -0.03
TVP23A-204ENST00000572102 TOP2BQ02880 1626 aa14.88□□□□□ -0.03
TVP23A-204ENST00000572102 HOMEZQ8IX15 550 aa14.88□□□□□ -0.03
TVP23A-204ENST00000572102 KIF21BO75037 1637 aa14.87□□□□□ -0.03
TVP23A-204ENST00000572102 PDS5BQ9NTI5 1447 aa14.82□□□□□ -0.04
TVP23A-204ENST00000572102 BIVM-ERCC5R4GMW8 1640 aa14.81□□□□□ -0.04
TVP23A-204ENST00000572102 TPRNQ4KMQ1 711 aa14.79□□□□□ -0.04
TVP23A-204ENST00000572102 URB2Q14146 1524 aaKnown RBP14.77□□□□□ -0.05
TVP23A-204ENST00000572102 KIF27Q86VH2 1401 aa14.76□□□□□ -0.05
TVP23A-204ENST00000572102 CUX2O14529 1486 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms