RNA–Protein interactions for RNA: ENST00000571961.7

JRK-203, Transcript of Jrk helix-turn-helix protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene JRK, Length 2,687 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
JRK-203ENST00000571961 LRRC9Q6ZRR7 1453 aa23.18■■□□□ 1.3
JRK-203ENST00000571961 P3H3Q8IVL6 736 aa23.18■■□□□ 1.3
JRK-203ENST00000571961 NESP48681 1621 aa23.17■■□□□ 1.3
JRK-203ENST00000571961 PHLDB1Q86UU1 1377 aa23.17■■□□□ 1.3
JRK-203ENST00000571961 SETD5Q9C0A6 1442 aa23.16■■□□□ 1.3
JRK-203ENST00000571961 FAM50AQ14320 339 aaKnown RBP23.16■■□□□ 1.3
JRK-203ENST00000571961 ATP1B4Q9UN42 357 aaPredicted RBP23.15■■□□□ 1.3
JRK-203ENST00000571961 SUPT16HQ9Y5B9 1047 aaKnown RBP23.14■■□□□ 1.29
JRK-203ENST00000571961 SIN3AQ96ST3 1273 aa23.1■■□□□ 1.29
JRK-203ENST00000571961 FHAD1B1AJZ9 1412 aa23.09■■□□□ 1.29
JRK-203ENST00000571961 KCNH8Q96L42 1107 aa23.08■■□□□ 1.29
JRK-203ENST00000571961 PCF11O94913 1555 aaKnown RBP23.05■■□□□ 1.28
JRK-203ENST00000571961 FHOD3Q2V2M9 1422 aa23.02■■□□□ 1.28
JRK-203ENST00000571961 CFAP43Q8NDM7 1665 aa23.02■■□□□ 1.28
JRK-203ENST00000571961 WDR97A6NE52 1622 aa23.02■■□□□ 1.28
JRK-203ENST00000571961 FANCD2Q9BXW9 1451 aa23.01■■□□□ 1.27
JRK-203ENST00000571961 DDX10Q13206 875 aaKnown RBP22.99■■□□□ 1.27
JRK-203ENST00000571961 RAD54L2Q9Y4B4 1467 aa22.99■■□□□ 1.27
JRK-203ENST00000571961 LAMC3Q9Y6N6 1575 aa22.98■■□□□ 1.27
JRK-203ENST00000571961 FYCO1Q9BQS8 1478 aa22.92■■□□□ 1.26
JRK-203ENST00000571961 HIRIP3Q9BW71 556 aaPredicted RBP22.91■■□□□ 1.26
JRK-203ENST00000571961 ABCA10Q8WWZ4 1543 aa22.9■■□□□ 1.26
JRK-203ENST00000571961 CASKIN1Q8WXD9 1431 aa22.9■■□□□ 1.26
JRK-203ENST00000571961 DNMBPQ6XZF7 1577 aa22.9■■□□□ 1.26
JRK-203ENST00000571961 POLA1P09884 1462 aaPredicted RBP22.9■■□□□ 1.26
JRK-203ENST00000571961 TIMELESSQ9UNS1 1208 aa22.88■■□□□ 1.25
JRK-203ENST00000571961 EFCAB5A4FU69 1503 aa22.88■■□□□ 1.25
JRK-203ENST00000571961 TOPBP1Q92547 1522 aa22.87■■□□□ 1.25
JRK-203ENST00000571961 KIF21AQ7Z4S6 1674 aa22.86■■□□□ 1.25
JRK-203ENST00000571961 PPP1R15AO75807 674 aaPredicted RBP22.86■■□□□ 1.25
JRK-203ENST00000571961 AQRO60306 1485 aaKnown RBP eCLIP22.84■■□□□ 1.258e-6■■■■□ 23.2
JRK-203ENST00000571961 PDS5BQ9NTI5 1447 aa22.84■■□□□ 1.25
JRK-203ENST00000571961 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.83■■□□□ 1.25
JRK-203ENST00000571961 ERCC6Q03468 1493 aa22.82■■□□□ 1.24
JRK-203ENST00000571961 FGD6Q6ZV73 1430 aa22.81■■□□□ 1.24
JRK-203ENST00000571961 CUL7Q14999 1698 aa22.8■■□□□ 1.24
JRK-203ENST00000571961 TSHZ2Q9NRE2 1034 aa22.8■■□□□ 1.24
JRK-203ENST00000571961 CTTNBP2Q8WZ74 1663 aa22.8■■□□□ 1.24
JRK-203ENST00000571961 FMN1Q68DA7 1419 aa22.79■■□□□ 1.24
JRK-203ENST00000571961 MTUS2Q5JR59 1369 aa22.78■■□□□ 1.24
JRK-203ENST00000571961 BCANQ96GW7 911 aa22.78■■□□□ 1.24
JRK-203ENST00000571961 TONSLQ96HA7 1378 aa22.75■■□□□ 1.23
JRK-203ENST00000571961 SNAPC4Q5SXM2 1469 aa22.75■■□□□ 1.23
JRK-203ENST00000571961 CCDC18Q5T9S5 1454 aa22.75■■□□□ 1.23
JRK-203ENST00000571961 PTPRKQ15262 1439 aa22.73■■□□□ 1.23
JRK-203ENST00000571961 ANP32CO43423 234 aa22.73■■□□□ 1.23
JRK-203ENST00000571961 FKBP8Q14318 412 aa22.73■■□□□ 1.23
JRK-203ENST00000571961 TDRD9Q8NDG6 1382 aaKnown RBP22.7■■□□□ 1.22
JRK-203ENST00000571961 HFM1A2PYH4 1435 aa22.69■■□□□ 1.22
JRK-203ENST00000571961 CCER2I3L3R5 266 aa22.69■■□□□ 1.22
JRK-203ENST00000571961 TRIM52Q96A61 297 aa22.69■■□□□ 1.22
JRK-203ENST00000571961 UACAQ9BZF9 1416 aa22.68■■□□□ 1.22
JRK-203ENST00000571961 PTPN23Q9H3S7 1636 aa22.66■■□□□ 1.22
JRK-203ENST00000571961 URB2Q14146 1524 aaKnown RBP22.66■■□□□ 1.22
JRK-203ENST00000571961 NCOA2Q15596 1464 aa22.66■■□□□ 1.22
JRK-203ENST00000571961 LRRIQ1Q96JM4 1722 aa22.64■■□□□ 1.21
JRK-203ENST00000571961 NAIPQ13075 1403 aa22.63■■□□□ 1.21
JRK-203ENST00000571961 MYOM3Q5VTT5 1437 aa22.63■■□□□ 1.21
JRK-203ENST00000571961 SAMD9Q5K651 1589 aa22.63■■□□□ 1.21
JRK-203ENST00000571961 GRIN2BQ13224 1484 aa22.61■■□□□ 1.21
JRK-203ENST00000571961 GAPVD1Q14C86 1478 aa22.6■■□□□ 1.21
JRK-203ENST00000571961 NEFLP07196 543 aa22.59■■□□□ 1.21
JRK-203ENST00000571961 MRC2Q9UBG0 1479 aa22.58■■□□□ 1.21
JRK-203ENST00000571961 ABCA5Q8WWZ7 1642 aa22.58■■□□□ 1.21
JRK-203ENST00000571961 SUPT6HQ7KZ85 1726 aaKnown RBP22.56■■□□□ 1.2
JRK-203ENST00000571961 RRP7BPQ9NSQ0 103 aa22.56■■□□□ 1.2
JRK-203ENST00000571961 CHIC2Q9UKJ5 165 aa22.55■■□□□ 1.2
JRK-203ENST00000571961 THOC2Q8NI27 1593 aaKnown RBP22.55■■□□□ 1.2
JRK-203ENST00000571961 EHBP1L1Q8N3D4 1523 aa22.54■■□□□ 1.2
JRK-203ENST00000571961 UGGT2Q9NYU1 1516 aa22.5■■□□□ 1.19
JRK-203ENST00000571961 MAGI3Q5TCQ9 1506 aa22.5■■□□□ 1.19
JRK-203ENST00000571961 KDM5BQ9UGL1 1544 aa22.5■■□□□ 1.19
JRK-203ENST00000571961 WDR62O43379 1518 aa22.46■■□□□ 1.19
JRK-203ENST00000571961 ARHGEF11O15085 1522 aa22.45■■□□□ 1.18
JRK-203ENST00000571961 HSPA5P11021 654 aaKnown RBP22.44■■□□□ 1.18
JRK-203ENST00000571961 ARID3CA6NKF2 412 aa22.42■■□□□ 1.18
JRK-203ENST00000571961 ANP32EQ9BTT0 268 aa22.42■■□□□ 1.18
JRK-203ENST00000571961 HNRNPUQ00839 825 aaKnown RBP eCLIP22.41■■□□□ 1.18
JRK-203ENST00000571961 WASHC2AQ641Q2 1341 aa22.41■■□□□ 1.18
JRK-203ENST00000571961 DENND4BO75064 1496 aaPredicted RBP22.4■■□□□ 1.18
JRK-203ENST00000571961 TCOF1Q13428 1488 aaKnown RBP22.4■■□□□ 1.18
JRK-203ENST00000571961 KDM6BO15054 1643 aa22.38■■□□□ 1.17
JRK-203ENST00000571961 HECW1Q76N89 1606 aa22.37■■□□□ 1.17
JRK-203ENST00000571961 GCC2Q8IWJ2 1684 aa22.37■■□□□ 1.17
JRK-203ENST00000571961 MPHOSPH9Q99550 1183 aa22.36■■□□□ 1.17
JRK-203ENST00000571961 EPRSP07814 1512 aaKnown RBP22.36■■□□□ 1.17
JRK-203ENST00000571961 FOXD1Q16676 465 aa22.36■■□□□ 1.17
JRK-203ENST00000571961 EIF4G2P78344 907 aaKnown RBP eCLIP22.35■■□□□ 1.174e-6■■■■■ 48.5
JRK-203ENST00000571961 TARBP1Q13395 1621 aaKnown RBP22.35■■□□□ 1.17
JRK-203ENST00000571961 RBM19Q9Y4C8 960 aaKnown RBP22.35■■□□□ 1.17
JRK-203ENST00000571961 CDK13Q14004 1512 aaKnown RBP22.35■■□□□ 1.17
JRK-203ENST00000571961 L3MBTL2Q969R5 705 aa22.33■■□□□ 1.16
JRK-203ENST00000571961 AKNAQ7Z591 1439 aa22.32■■□□□ 1.16
JRK-203ENST00000571961 IQGAP2Q13576 1575 aa22.31■■□□□ 1.16
JRK-203ENST00000571961 IRX6P78412 446 aaPredicted RBP22.3■■□□□ 1.16
JRK-203ENST00000571961 MIA2Q96PC5 1412 aa22.3■■□□□ 1.16
JRK-203ENST00000571961 PBRM1Q86U86 1689 aa22.27■■□□□ 1.16
JRK-203ENST00000571961 C11orf95C9JLR9 678 aaPredicted RBP22.26■■□□□ 1.15
JRK-203ENST00000571961 CCDC184Q52MB2 194 aa22.26■■□□□ 1.15
JRK-203ENST00000571961 CNTLNQ9NXG0 1405 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms