RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 TDRD9Q8NDG6 1382 aaKnown RBP11.79□□□□□ -0.52
SMG6-204ENST00000570606 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.77□□□□□ -0.53
SMG6-204ENST00000570606 PBRM1Q86U86 1689 aa11.77□□□□□ -0.53
SMG6-204ENST00000570606 ARAP1Q96P48 1450 aa11.76□□□□□ -0.53
SMG6-204ENST00000570606 MAGI1Q96QZ7 1491 aaPredicted RBP11.76□□□□□ -0.53
SMG6-204ENST00000570606 SYNJ1O43426 1573 aa11.75□□□□□ -0.53
SMG6-204ENST00000570606 CYB5RLQ6IPT4 315 aa11.74□□□□□ -0.53
SMG6-204ENST00000570606 GRIN2BQ13224 1484 aa11.74□□□□□ -0.53
SMG6-204ENST00000570606 CLASP1Q7Z460 1538 aa11.73□□□□□ -0.53
SMG6-204ENST00000570606 SYNJ2O15056 1496 aa11.71□□□□□ -0.53
SMG6-204ENST00000570606 CHMP7Q8WUX9 453 aaPredicted RBP11.71□□□□□ -0.53
SMG6-204ENST00000570606 SUPT5HO00267 1087 aaKnown RBP11.7□□□□□ -0.54
SMG6-204ENST00000570606 ABCA5Q8WWZ7 1642 aa11.7□□□□□ -0.54
SMG6-204ENST00000570606 GAPVD1Q14C86 1478 aa11.7□□□□□ -0.54
SMG6-204ENST00000570606 U3KPZ7 1027 aaPredicted RBP11.68□□□□□ -0.54
SMG6-204ENST00000570606 ABCA10Q8WWZ4 1543 aa11.68□□□□□ -0.54
SMG6-204ENST00000570606 TRHP20396 242 aaPredicted RBP11.66□□□□□ -0.54
SMG6-204ENST00000570606 BIVM-ERCC5R4GMW8 1640 aa11.64□□□□□ -0.55
SMG6-204ENST00000570606 ATF5Q9Y2D1 282 aaPredicted RBP11.64□□□□□ -0.55
SMG6-204ENST00000570606 TOP2BQ02880 1626 aa11.63□□□□□ -0.55
SMG6-204ENST00000570606 ADAMTS12P58397 1594 aa11.62□□□□□ -0.55
SMG6-204ENST00000570606 WRNQ14191 1432 aaPredicted RBP eCLIP11.62□□□□□ -0.55
SMG6-204ENST00000570606 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.62□□□□□ -0.55
SMG6-204ENST00000570606 HNRNPUL2Q1KMD3 747 aaKnown RBP11.62□□□□□ -0.55
SMG6-204ENST00000570606 SAMD1Q6SPF0 538 aaPredicted RBP11.61□□□□□ -0.55
SMG6-204ENST00000570606 GRIN2AQ12879 1464 aa11.59□□□□□ -0.55
SMG6-204ENST00000570606 CEP170Q5SW79 1584 aa11.57□□□□□ -0.56
SMG6-204ENST00000570606 ERICH3Q5RHP9 1530 aa11.55□□□□□ -0.56
SMG6-204ENST00000570606 ERCC6L2Q5T890 1561 aa11.54□□□□□ -0.56
SMG6-204ENST00000570606 FHAD1B1AJZ9 1412 aa11.54□□□□□ -0.56
SMG6-204ENST00000570606 NUP160Q12769 1436 aa11.54□□□□□ -0.56
SMG6-204ENST00000570606 SHROOM2Q13796 1616 aa11.52□□□□□ -0.57
SMG6-204ENST00000570606 RUSC2Q8N2Y8 1516 aa11.46□□□□□ -0.57
SMG6-204ENST00000570606 FKBP8Q14318 412 aa11.45□□□□□ -0.58
SMG6-204ENST00000570606 PRG4Q92954 1404 aaPredicted RBP11.43□□□□□ -0.58
SMG6-204ENST00000570606 CUL7Q14999 1698 aa11.42□□□□□ -0.58
SMG6-204ENST00000570606 KIF13AQ9H1H9 1805 aa11.41□□□□□ -0.58
SMG6-204ENST00000570606 KIF27Q86VH2 1401 aa11.38□□□□□ -0.59
SMG6-204ENST00000570606 APLP2Q06481 763 aa11.38□□□□□ -0.59
SMG6-204ENST00000570606 JPH4Q96JJ6 628 aa11.37□□□□□ -0.59
SMG6-204ENST00000570606 ZNF219Q9P2Y4 722 aaPredicted RBP11.37□□□□□ -0.59
SMG6-204ENST00000570606 ADCY10Q96PN6 1610 aa11.35□□□□□ -0.59
SMG6-204ENST00000570606 KIAA0586Q9BVV6 1533 aa11.34□□□□□ -0.59
SMG6-204ENST00000570606 MAPKBP1O60336 1514 aa11.32□□□□□ -0.6
SMG6-204ENST00000570606 IGF1RP08069 1367 aa11.31□□□□□ -0.6
SMG6-204ENST00000570606 NPM1P06748 294 aaKnown RBP eCLIP11.31□□□□□ -0.6
SMG6-204ENST00000570606 DIP2BQ9P265 1576 aa11.31□□□□□ -0.6
SMG6-204ENST00000570606 RNF39Q9H2S5 420 aa11.3□□□□□ -0.6
SMG6-204ENST00000570606 ABCC10Q5T3U5 1492 aa11.3□□□□□ -0.6
SMG6-204ENST00000570606 TSPOAP1O95153 1857 aa11.28□□□□□ -0.6
SMG6-204ENST00000570606 IQGAP2Q13576 1575 aa11.28□□□□□ -0.6
SMG6-204ENST00000570606 CARMIL1Q5VZK9 1371 aa11.28□□□□□ -0.6
SMG6-204ENST00000570606 FAM69CQ0P6D2 419 aa11.27□□□□□ -0.61
SMG6-204ENST00000570606 CARMIL2Q6F5E8 1435 aa11.25□□□□□ -0.61
SMG6-204ENST00000570606 TTBK1Q5TCY1 1321 aaPredicted RBP11.24□□□□□ -0.61
SMG6-204ENST00000570606 PTPRGP23470 1445 aa11.24□□□□□ -0.61
SMG6-204ENST00000570606 KDM6BO15054 1643 aa11.24□□□□□ -0.61
SMG6-204ENST00000570606 SPINK5Q9NQ38 1064 aaPredicted RBP11.23□□□□□ -0.61
SMG6-204ENST00000570606 TNIKQ9UKE5 1360 aa11.23□□□□□ -0.61
SMG6-204ENST00000570606 ABCC2Q92887 1545 aa11.2□□□□□ -0.62
SMG6-204ENST00000570606 RAPGEF2Q9Y4G8 1499 aa11.19□□□□□ -0.62
SMG6-204ENST00000570606 CTTNBP2Q8WZ74 1663 aa11.19□□□□□ -0.62
SMG6-204ENST00000570606 KIAA0556O60303 1618 aa11.18□□□□□ -0.62
SMG6-204ENST00000570606 DISP1Q96F81 1524 aa11.18□□□□□ -0.62
SMG6-204ENST00000570606 RTN4Q9NQC3 1192 aaKnown RBP11.17□□□□□ -0.62
SMG6-204ENST00000570606 UGGT2Q9NYU1 1516 aa11.17□□□□□ -0.62
SMG6-204ENST00000570606 PLB1Q6P1J6 1458 aa11.17□□□□□ -0.62
SMG6-204ENST00000570606 ASXL2Q76L83 1435 aa11.17□□□□□ -0.62
SMG6-204ENST00000570606 C1QBPQ07021 282 aaKnown RBP11.16□□□□□ -0.62
SMG6-204ENST00000570606 UHRF1BP1LA0JNW5 1464 aa11.16□□□□□ -0.62
SMG6-204ENST00000570606 UACAQ9BZF9 1416 aa11.16□□□□□ -0.62
SMG6-204ENST00000570606 PPRC1Q5VV67 1664 aaKnown RBP11.15□□□□□ -0.62
SMG6-204ENST00000570606 MKRN4PQ13434 485 aaPredicted RBP11.15□□□□□ -0.62
SMG6-204ENST00000570606 AMER1Q5JTC6 1135 aaPredicted RBP11.15□□□□□ -0.62
SMG6-204ENST00000570606 ZCCHC11Q5TAX3 1644 aaKnown RBP11.15□□□□□ -0.62
SMG6-204ENST00000570606 GLI2P10070 1586 aa11.15□□□□□ -0.62
SMG6-204ENST00000570606 KDM5BQ9UGL1 1544 aa11.11□□□□□ -0.63
SMG6-204ENST00000570606 MAP3K4Q9Y6R4 1608 aa11.11□□□□□ -0.63
SMG6-204ENST00000570606 CAPN15O75808 1086 aa11.11□□□□□ -0.63
SMG6-204ENST00000570606 EPRSP07814 1512 aaKnown RBP11.1□□□□□ -0.63
SMG6-204ENST00000570606 POLA2Q14181 598 aa11.1□□□□□ -0.63
SMG6-204ENST00000570606 GOLGA3Q08378 1498 aa11.09□□□□□ -0.63
SMG6-204ENST00000570606 TEX14Q8IWB6 1497 aa11.08□□□□□ -0.64
SMG6-204ENST00000570606 WDR7Q9Y4E6 1490 aa11.07□□□□□ -0.64
SMG6-204ENST00000570606 SPDYE4A6NLX3 237 aa11.05□□□□□ -0.64
SMG6-204ENST00000570606 ABCA8O94911 1581 aa11.05□□□□□ -0.64
SMG6-204ENST00000570606 PRXQ9BXM0 1461 aa11.05□□□□□ -0.64
SMG6-204ENST00000570606 CFAP43Q8NDM7 1665 aa11.04□□□□□ -0.64
SMG6-204ENST00000570606 KDM4FA0A1W2PPD8 638 aa11.03□□□□□ -0.64
SMG6-204ENST00000570606 ADGRL1O94910 1474 aa11.02□□□□□ -0.65
SMG6-204ENST00000570606 COL17A1Q9UMD9 1497 aaPredicted RBP11□□□□□ -0.65
SMG6-204ENST00000570606 PROM2Q8N271 834 aa11□□□□□ -0.65
SMG6-204ENST00000570606 CD109Q6YHK3 1445 aa10.98□□□□□ -0.65
SMG6-204ENST00000570606 MAGI3Q5TCQ9 1506 aa10.98□□□□□ -0.65
SMG6-204ENST00000570606 FAM9AQ8IZU1 332 aaPredicted RBP10.97□□□□□ -0.65
SMG6-204ENST00000570606 SAMD9Q5K651 1589 aa10.97□□□□□ -0.65
SMG6-204ENST00000570606 ABCB7O75027 752 aa10.96□□□□□ -0.65
SMG6-204ENST00000570606 KCNH8Q96L42 1107 aa10.96□□□□□ -0.65
SMG6-204ENST00000570606 RAPGEF6Q8TEU7 1601 aa10.95□□□□□ -0.66
SMG6-204ENST00000570606 ARID3CA6NKF2 412 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms