RNA–Protein interactions for RNA: ENST00000569930.1

TSC2-226, Transcript of TSC complex subunit 2, humanhuman

TSL 2

Gene TSC2, Length 2,621 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-226ENST00000569930 ABCA10Q8WWZ4 1543 aa27■■□□□ 1.91
TSC2-226ENST00000569930 WDR62O43379 1518 aa26.95■■□□□ 1.91
TSC2-226ENST00000569930 IGF1RP08069 1367 aa26.93■■□□□ 1.9
TSC2-226ENST00000569930 TDRD9Q8NDG6 1382 aaKnown RBP26.91■■□□□ 1.9
TSC2-226ENST00000569930 ANP32EQ9BTT0 268 aa26.9■■□□□ 1.9
TSC2-226ENST00000569930 PRXQ9BXM0 1461 aa26.88■■□□□ 1.89
TSC2-226ENST00000569930 THOC2Q8NI27 1593 aaKnown RBP26.87■■□□□ 1.89
TSC2-226ENST00000569930 KANK4Q5T7N3 995 aaPredicted RBP26.86■■□□□ 1.89
TSC2-226ENST00000569930 KCNH8Q96L42 1107 aa26.83■■□□□ 1.89
TSC2-226ENST00000569930 TARBP1Q13395 1621 aaKnown RBP26.83■■□□□ 1.89
TSC2-226ENST00000569930 CARMIL1Q5VZK9 1371 aa26.81■■□□□ 1.88
TSC2-226ENST00000569930 WDR97A6NE52 1622 aa26.81■■□□□ 1.88
TSC2-226ENST00000569930 IFT140Q96RY7 1462 aa26.8■■□□□ 1.88
TSC2-226ENST00000569930 ARAP1Q96P48 1450 aa26.8■■□□□ 1.88
TSC2-226ENST00000569930 GAPVD1Q14C86 1478 aa26.79■■□□□ 1.88
TSC2-226ENST00000569930 ERICH3Q5RHP9 1530 aa26.78■■□□□ 1.88
TSC2-226ENST00000569930 RRBP1Q9P2E9 1410 aaKnown RBP26.74■■□□□ 1.87
TSC2-226ENST00000569930 BCANQ96GW7 911 aa26.73■■□□□ 1.87
TSC2-226ENST00000569930 AQRO60306 1485 aaKnown RBP eCLIP26.73■■□□□ 1.877e-7■■■■■ 38.9
TSC2-226ENST00000569930 ABCA5Q8WWZ7 1642 aa26.73■■□□□ 1.87
TSC2-226ENST00000569930 ZNF608Q9ULD9 1512 aaPredicted RBP26.68■■□□□ 1.86
TSC2-226ENST00000569930 ITGAEP38570 1179 aa26.64■■□□□ 1.85
TSC2-226ENST00000569930 CCNB3Q8WWL7 1395 aa26.63■■□□□ 1.85
TSC2-226ENST00000569930 FKBP8Q14318 412 aa26.62■■□□□ 1.85
TSC2-226ENST00000569930 CUL7Q14999 1698 aa26.61■■□□□ 1.85
TSC2-226ENST00000569930 GRIN2BQ13224 1484 aa26.59■■□□□ 1.85
TSC2-226ENST00000569930 BCL11AQ9H165 835 aa26.56■■□□□ 1.84
TSC2-226ENST00000569930 MAPKBP1O60336 1514 aa26.54■■□□□ 1.84
TSC2-226ENST00000569930 RAB3GAP2Q9H2M9 1393 aa26.53■■□□□ 1.84
TSC2-226ENST00000569930 PBRM1Q86U86 1689 aa26.52■■□□□ 1.84
TSC2-226ENST00000569930 DDX10Q13206 875 aaKnown RBP26.52■■□□□ 1.84
TSC2-226ENST00000569930 EIF4G3O43432 1585 aaKnown RBP26.51■■□□□ 1.83
TSC2-226ENST00000569930 FHAD1B1AJZ9 1412 aa26.5■■□□□ 1.83
TSC2-226ENST00000569930 RBM19Q9Y4C8 960 aaKnown RBP26.44■■□□□ 1.82
TSC2-226ENST00000569930 ARHGAP35Q9NRY4 1499 aa26.43■■□□□ 1.82
TSC2-226ENST00000569930 SNAPC4Q5SXM2 1469 aa26.43■■□□□ 1.82
TSC2-226ENST00000569930 ADAMTS12P58397 1594 aa26.41■■□□□ 1.82
TSC2-226ENST00000569930 SIN3AQ96ST3 1273 aa26.4■■□□□ 1.82
TSC2-226ENST00000569930 PPP1R15AO75807 674 aaPredicted RBP26.38■■□□□ 1.81
TSC2-226ENST00000569930 NEFLP07196 543 aa26.38■■□□□ 1.81
TSC2-226ENST00000569930 CHMP7Q8WUX9 453 aaPredicted RBP26.35■■□□□ 1.81
TSC2-226ENST00000569930 MAGI1Q96QZ7 1491 aaPredicted RBP26.35■■□□□ 1.81
TSC2-226ENST00000569930 SETD5Q9C0A6 1442 aa26.35■■□□□ 1.81
TSC2-226ENST00000569930 FBLN2P98095 1184 aa26.35■■□□□ 1.81
TSC2-226ENST00000569930 TRIM52Q96A61 297 aa26.35■■□□□ 1.81
TSC2-226ENST00000569930 HIRIP3Q9BW71 556 aaPredicted RBP26.32■■□□□ 1.8
TSC2-226ENST00000569930 SYNJ2O15056 1496 aa26.27■■□□□ 1.8
TSC2-226ENST00000569930 CTTNBP2Q8WZ74 1663 aa26.27■■□□□ 1.8
TSC2-226ENST00000569930 CCER2I3L3R5 266 aa26.26■■□□□ 1.79
TSC2-226ENST00000569930 P3H3Q8IVL6 736 aa26.26■■□□□ 1.79
TSC2-226ENST00000569930 GRIN2AQ12879 1464 aa26.25■■□□□ 1.79
TSC2-226ENST00000569930 TIAM1Q13009 1591 aa26.24■■□□□ 1.79
TSC2-226ENST00000569930 ANP32CO43423 234 aa26.22■■□□□ 1.79
TSC2-226ENST00000569930 PHLDB1Q86UU1 1377 aa26.21■■□□□ 1.79
TSC2-226ENST00000569930 FAM50AQ14320 339 aaKnown RBP26.2■■□□□ 1.78
TSC2-226ENST00000569930 MSH5O43196 834 aa26.19■■□□□ 1.78
TSC2-226ENST00000569930 LRRC9Q6ZRR7 1453 aa26.17■■□□□ 1.78
TSC2-226ENST00000569930 MAP3K1Q13233 1512 aa26.16■■□□□ 1.78
TSC2-226ENST00000569930 TIMELESSQ9UNS1 1208 aa26.16■■□□□ 1.78
TSC2-226ENST00000569930 EFCAB5A4FU69 1503 aa26.13■■□□□ 1.77
TSC2-226ENST00000569930 KIAA0586Q9BVV6 1533 aa26.12■■□□□ 1.77
TSC2-226ENST00000569930 IQGAP2Q13576 1575 aa26.12■■□□□ 1.77
TSC2-226ENST00000569930 FHOD3Q2V2M9 1422 aa26.11■■□□□ 1.77
TSC2-226ENST00000569930 CEP170Q5SW79 1584 aa26.05■■□□□ 1.76
TSC2-226ENST00000569930 NUP160Q12769 1436 aa26.05■■□□□ 1.76
TSC2-226ENST00000569930 SAMD9Q5K651 1589 aa26.01■■□□□ 1.75
TSC2-226ENST00000569930 ATP1B4Q9UN42 357 aaPredicted RBP26.01■■□□□ 1.75
TSC2-226ENST00000569930 IRX6P78412 446 aaPredicted RBP26■■□□□ 1.75
TSC2-226ENST00000569930 JPH4Q96JJ6 628 aa25.99■■□□□ 1.75
TSC2-226ENST00000569930 UGGT2Q9NYU1 1516 aa25.99■■□□□ 1.75
TSC2-226ENST00000569930 FANCIQ9NVI1 1328 aa25.98■■□□□ 1.75
TSC2-226ENST00000569930 FMN1Q68DA7 1419 aa25.98■■□□□ 1.75
TSC2-226ENST00000569930 HNRNPUQ00839 825 aaKnown RBP eCLIP25.95■■□□□ 1.74
TSC2-226ENST00000569930 TONSLQ96HA7 1378 aa25.95■■□□□ 1.74
TSC2-226ENST00000569930 CDK11AQ9UQ88 783 aaPredicted RBP25.94■■□□□ 1.74
TSC2-226ENST00000569930 CFAP43Q8NDM7 1665 aa25.94■■□□□ 1.74
TSC2-226ENST00000569930 CHD1O14646 1710 aa25.93■■□□□ 1.74
TSC2-226ENST00000569930 PCF11O94913 1555 aaKnown RBP25.92■■□□□ 1.74
TSC2-226ENST00000569930 DISP1Q96F81 1524 aa25.89■■□□□ 1.73
TSC2-226ENST00000569930 CASKIN1Q8WXD9 1431 aa25.88■■□□□ 1.73
TSC2-226ENST00000569930 ERICH6Q7L0X2 663 aa25.88■■□□□ 1.73
TSC2-226ENST00000569930 CARMIL2Q6F5E8 1435 aa25.85■■□□□ 1.73
TSC2-226ENST00000569930 FYCO1Q9BQS8 1478 aa25.85■■□□□ 1.73
TSC2-226ENST00000569930 KIAA0556O60303 1618 aa25.84■■□□□ 1.73
TSC2-226ENST00000569930 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.82■■□□□ 1.721e-7■■■■■ 49.8
TSC2-226ENST00000569930 CCDC18Q5T9S5 1454 aa25.8■■□□□ 1.72
TSC2-226ENST00000569930 PRG4Q92954 1404 aaPredicted RBP25.77■■□□□ 1.72
TSC2-226ENST00000569930 UACAQ9BZF9 1416 aa25.75■■□□□ 1.71
TSC2-226ENST00000569930 FGD6Q6ZV73 1430 aa25.74■■□□□ 1.71
TSC2-226ENST00000569930 PTPRKQ15262 1439 aa25.73■■□□□ 1.71
TSC2-226ENST00000569930 PPP4R2Q9NY27 417 aa25.73■■□□□ 1.71
TSC2-226ENST00000569930 KDM5BQ9UGL1 1544 aa25.71■■□□□ 1.71
TSC2-226ENST00000569930 WASHC2AQ641Q2 1341 aa25.71■■□□□ 1.71
TSC2-226ENST00000569930 ERICH6BQ5W0A0 696 aa25.7■■□□□ 1.71
TSC2-226ENST00000569930 HFM1A2PYH4 1435 aa25.7■■□□□ 1.7
TSC2-226ENST00000569930 CCDC184Q52MB2 194 aa25.68■■□□□ 1.7
TSC2-226ENST00000569930 ARID3CA6NKF2 412 aa25.67■■□□□ 1.7
TSC2-226ENST00000569930 HSPA5P11021 654 aaKnown RBP25.67■■□□□ 1.7
TSC2-226ENST00000569930 PTPN23Q9H3S7 1636 aa25.67■■□□□ 1.7
TSC2-226ENST00000569930 OSCARQ8IYS5 282 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms